RNA–Protein interactions for RNA: ENST00000518436.5

LINC01339-202, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 375 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-202ENST00000518436 PTPREP23469 700 aa8.68□□□□□ -1.02
LINC01339-202ENST00000518436 PBX2P40425 430 aa8.68□□□□□ -1.02
LINC01339-202ENST00000518436 TSR1Q2NL82 804 aaKnown RBP8.67□□□□□ -1.02
LINC01339-202ENST00000518436 NUTM2FA1L443 756 aa8.66□□□□□ -1.02
LINC01339-202ENST00000518436 ARHGAP33O14559 1287 aa8.66□□□□□ -1.02
LINC01339-202ENST00000518436 POTEEQ6S8J3 1075 aa8.66□□□□□ -1.02
LINC01339-202ENST00000518436 KCNH8Q96L42 1107 aa8.66□□□□□ -1.02
LINC01339-202ENST00000518436 KCNK17Q96T54 332 aa8.66□□□□□ -1.02
LINC01339-202ENST00000518436 CDHR5Q9HBB8 845 aa8.65□□□□□ -1.02
LINC01339-202ENST00000518436 PPP1R3GB7ZBB8 358 aa8.64□□□□□ -1.03
LINC01339-202ENST00000518436 GPIHBP1Q8IV16 184 aa8.64□□□□□ -1.03
LINC01339-202ENST00000518436 AXIN2Q9Y2T1 843 aa8.64□□□□□ -1.03
LINC01339-202ENST00000518436 PSEN2P49810 448 aa8.63□□□□□ -1.03
LINC01339-202ENST00000518436 CERKQ8TCT0 537 aa8.63□□□□□ -1.03
LINC01339-202ENST00000518436 COL9A1P20849 921 aa8.62□□□□□ -1.03
LINC01339-202ENST00000518436 PTGDRQ13258 359 aa8.62□□□□□ -1.03
LINC01339-202ENST00000518436 NPDC1Q9NQX5 325 aaPredicted RBP8.62□□□□□ -1.03
LINC01339-202ENST00000518436 GPR37O15354 613 aa8.61□□□□□ -1.03
LINC01339-202ENST00000518436 FCHSD2O94868 740 aa8.61□□□□□ -1.03
LINC01339-202ENST00000518436 CDAN1Q8IWY9 1227 aa8.61□□□□□ -1.03
LINC01339-202ENST00000518436 LSM11P83369 360 aaKnown RBP eCLIP8.59□□□□□ -1.03
LINC01339-202ENST00000518436 DMRTA1Q5VZB9 504 aa8.59□□□□□ -1.03
LINC01339-202ENST00000518436 KRTAP3-3Q9BYR6 98 aa8.59□□□□□ -1.03
LINC01339-202ENST00000518436 KRTAP3-2Q9BYR7 98 aa8.59□□□□□ -1.03
LINC01339-202ENST00000518436 HIC1Q14526 733 aa8.58□□□□□ -1.04
LINC01339-202ENST00000518436 ZC3H15Q8WU90 426 aaKnown RBP8.58□□□□□ -1.04
LINC01339-202ENST00000518436 ZBED2Q9BTP6 218 aa8.58□□□□□ -1.04
LINC01339-202ENST00000518436 SLC4A5Q9BY07 1137 aa8.58□□□□□ -1.04
LINC01339-202ENST00000518436 RBM27Q9P2N5 1060 aaKnown RBP8.58□□□□□ -1.04
LINC01339-202ENST00000518436 PRSS12P56730 875 aa8.57□□□□□ -1.04
LINC01339-202ENST00000518436 CDCA7LQ96GN5 454 aa8.57□□□□□ -1.04
LINC01339-202ENST00000518436 TK2O00142 265 aa8.56□□□□□ -1.04
LINC01339-202ENST00000518436 GNPATO15228 680 aa8.56□□□□□ -1.04
LINC01339-202ENST00000518436 PCDH10Q9P2E7 1040 aa8.56□□□□□ -1.04
LINC01339-202ENST00000518436 TRIM6-TRIM34B2RNG4 842 aa8.55□□□□□ -1.04
LINC01339-202ENST00000518436 ONECUT3O60422 494 aaPredicted RBP8.55□□□□□ -1.04
LINC01339-202ENST00000518436 PROX2Q3B8N5 592 aa8.55□□□□□ -1.04
LINC01339-202ENST00000518436 ANKRD13DQ6ZTN6 518 aa8.54□□□□□ -1.04
LINC01339-202ENST00000518436 TTC13Q8NBP0 860 aa8.54□□□□□ -1.04
LINC01339-202ENST00000518436 VPS9D1Q9Y2B5 631 aa8.54□□□□□ -1.04
LINC01339-202ENST00000518436 ZMYND10O75800 440 aa8.53□□□□□ -1.04
LINC01339-202ENST00000518436 ADGRD1Q6QNK2 874 aa8.53□□□□□ -1.04
LINC01339-202ENST00000518436 PADI6Q6TGC4 694 aa8.53□□□□□ -1.04
LINC01339-202ENST00000518436 TSKSQ9UJT2 592 aa8.53□□□□□ -1.04
LINC01339-202ENST00000518436 FECHP22830 423 aa8.52□□□□□ -1.05
LINC01339-202ENST00000518436 FAM198AQ9UFP1 575 aa8.52□□□□□ -1.05
LINC01339-202ENST00000518436 BARGINQ6ZT62 677 aa8.51□□□□□ -1.05
LINC01339-202ENST00000518436 PACS2Q86VP3 889 aa8.51□□□□□ -1.05
LINC01339-202ENST00000518436 RABGEF1Q9UJ41 708 aa8.51□□□□□ -1.05
LINC01339-202ENST00000518436 KIAA1468Q9P260 1216 aa8.5□□□□□ -1.05
LINC01339-202ENST00000518436 MAP2K5Q13163 448 aa8.49□□□□□ -1.05
LINC01339-202ENST00000518436 TPRNQ4KMQ1 711 aa8.49□□□□□ -1.05
LINC01339-202ENST00000518436 NBPF26B4DH59 902 aa8.48□□□□□ -1.05
LINC01339-202ENST00000518436 BHMG1C9JSJ3 638 aaPredicted RBP8.48□□□□□ -1.05
LINC01339-202ENST00000518436 HRO43593 1189 aa8.48□□□□□ -1.05
LINC01339-202ENST00000518436 NBPF3Q9H094 633 aa8.48□□□□□ -1.05
LINC01339-202ENST00000518436 MINK1Q8N4C8 1332 aaPredicted RBP8.48□□□□□ -1.05
LINC01339-202ENST00000518436 TATDN2Q93075 761 aa8.47□□□□□ -1.05
LINC01339-202ENST00000518436 ADGRG1Q9Y653 693 aa8.47□□□□□ -1.05
LINC01339-202ENST00000518436 C3orf80F5H4A9 247 aa8.46□□□□□ -1.06
LINC01339-202ENST00000518436 KRI1Q8N9T8 703 aaKnown RBP8.46□□□□□ -1.06
LINC01339-202ENST00000518436 PNMA3Q9UL41 463 aa8.46□□□□□ -1.06
LINC01339-202ENST00000518436 IRF6O14896 467 aa8.45□□□□□ -1.06
LINC01339-202ENST00000518436 OATP04181 439 aa8.45□□□□□ -1.06
LINC01339-202ENST00000518436 FAM161AQ3B820 660 aa8.45□□□□□ -1.06
LINC01339-202ENST00000518436 NUDT18Q6ZVK8 323 aa8.45□□□□□ -1.06
LINC01339-202ENST00000518436 LAPTM4BQ86VI4 370 aa8.45□□□□□ -1.06
LINC01339-202ENST00000518436 SMAPO00193 183 aa8.44□□□□□ -1.06
LINC01339-202ENST00000518436 MRPL50Q8N5N7 158 aaKnown RBP8.44□□□□□ -1.06
LINC01339-202ENST00000518436 RBM46Q8TBY0 533 aaKnown RBP8.44□□□□□ -1.06
LINC01339-202ENST00000518436 STAC3Q96MF2 364 aa8.44□□□□□ -1.06
LINC01339-202ENST00000518436 SEPT9Q9UHD8 586 aaPredicted RBP8.44□□□□□ -1.06
LINC01339-202ENST00000518436 CCDC102AQ96A19 550 aa8.43□□□□□ -1.06
LINC01339-202ENST00000518436 EYA1Q99502 592 aa8.43□□□□□ -1.06
LINC01339-202ENST00000518436 FAM98CQ17RN3 349 aaKnown RBP8.42□□□□□ -1.06
LINC01339-202ENST00000518436 METTL3Q86U44 580 aaKnown RBP8.42□□□□□ -1.06
LINC01339-202ENST00000518436 PXYLP1Q8TE99 480 aa8.42□□□□□ -1.06
LINC01339-202ENST00000518436 AK7Q96M32 723 aa8.41□□□□□ -1.06
LINC01339-202ENST00000518436 SLC24A3Q9HC58 644 aa8.41□□□□□ -1.06
LINC01339-202ENST00000518436 PRKCSHP14314 528 aaPredicted RBP8.4□□□□□ -1.06
LINC01339-202ENST00000518436 DNAJB2P25686 324 aa8.39□□□□□ -1.07
LINC01339-202ENST00000518436 SPNS2Q8IVW8 549 aa8.39□□□□□ -1.07
LINC01339-202ENST00000518436 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.38□□□□□ -1.07
LINC01339-202ENST00000518436 RCCD1A6NED2 376 aa8.38□□□□□ -1.07
LINC01339-202ENST00000518436 GOLGA8CPA6NN73 597 aa8.38□□□□□ -1.07
LINC01339-202ENST00000518436 ZFRQ96KR1 1074 aaKnown RBP8.38□□□□□ -1.07
LINC01339-202ENST00000518436 PHOX2BQ99453 314 aa8.37□□□□□ -1.07
LINC01339-202ENST00000518436 TRIM66O15016 1216 aa8.36□□□□□ -1.07
LINC01339-202ENST00000518436 TMEM134Q9H6X4 195 aa8.36□□□□□ -1.07
LINC01339-202ENST00000518436 MYT1LQ9UL68 1186 aa8.36□□□□□ -1.07
LINC01339-202ENST00000518436 HDGFP51858 240 aaKnown RBP8.35□□□□□ -1.07
LINC01339-202ENST00000518436 AMHR2Q16671 573 aa8.35□□□□□ -1.07
LINC01339-202ENST00000518436 ANKK1Q8NFD2 765 aa8.35□□□□□ -1.07
LINC01339-202ENST00000518436 SAMD7Q7Z3H4 446 aa8.34□□□□□ -1.07
LINC01339-202ENST00000518436 NLRP7Q8WX94 980 aa8.34□□□□□ -1.07
LINC01339-202ENST00000518436 WNT2BQ93097 391 aa8.34□□□□□ -1.07
LINC01339-202ENST00000518436 SWT1Q5T5J6 900 aaKnown RBP8.33□□□□□ -1.08
LINC01339-202ENST00000518436 CLCN1P35523 988 aa8.32□□□□□ -1.08
LINC01339-202ENST00000518436 MDM2Q00987 491 aaPredicted RBP8.32□□□□□ -1.08
LINC01339-202ENST00000518436 KCTD12Q96CX2 325 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms