RNA–Protein interactions for RNA: ENST00000518136.3

HOXA13-202, Transcript of homeobox A13, humanhuman

TSL 2

Gene HOXA13, Length 871 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13-202ENST00000518136 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.93□□□□□ -0.34
HOXA13-202ENST00000518136 WDR7Q9Y4E6 1490 aa12.92□□□□□ -0.34
HOXA13-202ENST00000518136 STK25O00506 426 aa12.92□□□□□ -0.34
HOXA13-202ENST00000518136 PREX2Q70Z35 1606 aa12.91□□□□□ -0.34
HOXA13-202ENST00000518136 MYO5CQ9NQX4 1742 aa12.91□□□□□ -0.34
HOXA13-202ENST00000518136 KIF13AQ9H1H9 1805 aa12.91□□□□□ -0.34
HOXA13-202ENST00000518136 ITSN2Q9NZM3 1697 aa12.91□□□□□ -0.34
HOXA13-202ENST00000518136 ABCA9Q8IUA7 1624 aa12.91□□□□□ -0.34
HOXA13-202ENST00000518136 RRBP1Q9P2E9 1410 aaKnown RBP12.88□□□□□ -0.35
HOXA13-202ENST00000518136 TIE1P35590 1138 aa12.88□□□□□ -0.35
HOXA13-202ENST00000518136 HS6ST3Q8IZP7 471 aa12.88□□□□□ -0.35
HOXA13-202ENST00000518136 TMEM106CQ9BVX2 250 aa12.88□□□□□ -0.35
HOXA13-202ENST00000518136 BCL11BQ9C0K0 894 aaPredicted RBP12.88□□□□□ -0.35
HOXA13-202ENST00000518136 STK24Q9Y6E0 443 aa12.88□□□□□ -0.35
HOXA13-202ENST00000518136 PTPN23Q9H3S7 1636 aa12.88□□□□□ -0.35
HOXA13-202ENST00000518136 MYOM3Q5VTT5 1437 aa12.88□□□□□ -0.35
HOXA13-202ENST00000518136 DIP2BQ9P265 1576 aa12.87□□□□□ -0.35
HOXA13-202ENST00000518136 GPATCH8Q9UKJ3 1502 aaKnown RBP12.87□□□□□ -0.35
HOXA13-202ENST00000518136 FGD6Q6ZV73 1430 aa12.87□□□□□ -0.35
HOXA13-202ENST00000518136 PLEKHD1A6NEE1 506 aa12.86□□□□□ -0.35
HOXA13-202ENST00000518136 MAP3K4Q9Y6R4 1608 aa12.86□□□□□ -0.35
HOXA13-202ENST00000518136 CDK11AQ9UQ88 783 aaPredicted RBP12.85□□□□□ -0.35
HOXA13-202ENST00000518136 PPRC1Q5VV67 1664 aaKnown RBP12.85□□□□□ -0.35
HOXA13-202ENST00000518136 DCBLD2Q96PD2 775 aa12.84□□□□□ -0.35
HOXA13-202ENST00000518136 BMP2KQ9NSY1 1161 aaPredicted RBP12.84□□□□□ -0.35
HOXA13-202ENST00000518136 SAMD9LQ8IVG5 1584 aa12.84□□□□□ -0.35
HOXA13-202ENST00000518136 TCOF1Q13428 1488 aaKnown RBP12.84□□□□□ -0.35
HOXA13-202ENST00000518136 GLI2P10070 1586 aa12.83□□□□□ -0.36
HOXA13-202ENST00000518136 TTLL13PA6NNM8 815 aa12.83□□□□□ -0.36
HOXA13-202ENST00000518136 CROCC2H7BZ55 1655 aa12.81□□□□□ -0.36
HOXA13-202ENST00000518136 ARAP3Q8WWN8 1544 aa12.81□□□□□ -0.36
HOXA13-202ENST00000518136 CCNB3Q8WWL7 1395 aa12.81□□□□□ -0.36
HOXA13-202ENST00000518136 TSPOAP1O95153 1857 aa12.8□□□□□ -0.36
HOXA13-202ENST00000518136 MIA2Q96PC5 1412 aa12.8□□□□□ -0.36
HOXA13-202ENST00000518136 KCNH8Q96L42 1107 aa12.8□□□□□ -0.36
HOXA13-202ENST00000518136 CABP2Q9NPB3 220 aa12.8□□□□□ -0.36
HOXA13-202ENST00000518136 CAMSAP2Q08AD1 1489 aa12.79□□□□□ -0.36
HOXA13-202ENST00000518136 GOLGA2Q08379 1002 aa12.79□□□□□ -0.36
HOXA13-202ENST00000518136 BBXQ8WY36 941 aaPredicted RBP12.79□□□□□ -0.36
HOXA13-202ENST00000518136 DNMT1P26358 1616 aaKnown RBP12.78□□□□□ -0.36
HOXA13-202ENST00000518136 ATMINO43313 823 aaPredicted RBP12.78□□□□□ -0.36
HOXA13-202ENST00000518136 TRIM26Q12899 539 aaPredicted RBP12.78□□□□□ -0.36
HOXA13-202ENST00000518136 PLCH2O75038 1416 aa12.78□□□□□ -0.36
HOXA13-202ENST00000518136 ATN1P54259 1190 aaPredicted RBP12.77□□□□□ -0.37
HOXA13-202ENST00000518136 ASTLQ6HA08 431 aaPredicted RBP12.77□□□□□ -0.37
HOXA13-202ENST00000518136 ZNF644Q9H582 1327 aaPredicted RBP12.77□□□□□ -0.37
HOXA13-202ENST00000518136 ABCC1P33527 1531 aa12.77□□□□□ -0.37
HOXA13-202ENST00000518136 ARHGAP5Q13017 1502 aa12.77□□□□□ -0.37
HOXA13-202ENST00000518136 TRIM35Q9UPQ4 493 aa12.76□□□□□ -0.37
HOXA13-202ENST00000518136 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.76□□□□□ -0.37
HOXA13-202ENST00000518136 PTPRKQ15262 1439 aa12.76□□□□□ -0.37
HOXA13-202ENST00000518136 ARHGEF12Q9NZN5 1544 aa12.76□□□□□ -0.37
HOXA13-202ENST00000518136 SYCP2Q9BX26 1530 aa12.75□□□□□ -0.37
HOXA13-202ENST00000518136 ARHGEF5Q12774 1597 aa12.74□□□□□ -0.37
HOXA13-202ENST00000518136 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.74□□□□□ -0.37
HOXA13-202ENST00000518136 MBD5Q9P267 1494 aa12.73□□□□□ -0.37
HOXA13-202ENST00000518136 EFCAB3Q8N7B9 438 aa12.73□□□□□ -0.37
HOXA13-202ENST00000518136 ADGBQ8N7X0 1667 aa12.73□□□□□ -0.37
HOXA13-202ENST00000518136 CFAP74Q9C0B2 1584 aa12.73□□□□□ -0.37
HOXA13-202ENST00000518136 MKRN3Q13064 507 aaKnown RBP12.72□□□□□ -0.37
HOXA13-202ENST00000518136 PCGF6Q9BYE7 350 aa12.72□□□□□ -0.37
HOXA13-202ENST00000518136 FANCAO15360 1455 aa12.72□□□□□ -0.37
HOXA13-202ENST00000518136 CD109Q6YHK3 1445 aa12.71□□□□□ -0.37
HOXA13-202ENST00000518136 CFDP1Q9UEE9 299 aaPredicted RBP12.71□□□□□ -0.37
HOXA13-202ENST00000518136 ABCC5O15440 1437 aa12.71□□□□□ -0.38
HOXA13-202ENST00000518136 POTEIP0CG38 1075 aa12.7□□□□□ -0.38
HOXA13-202ENST00000518136 RICTORQ6R327 1708 aa12.7□□□□□ -0.38
HOXA13-202ENST00000518136 GCC2Q8IWJ2 1684 aa12.7□□□□□ -0.38
HOXA13-202ENST00000518136 DAPK1P53355 1430 aa12.7□□□□□ -0.38
HOXA13-202ENST00000518136 FRMPD1Q5SYB0 1578 aa12.69□□□□□ -0.38
HOXA13-202ENST00000518136 FAM50AQ14320 339 aaKnown RBP12.69□□□□□ -0.38
HOXA13-202ENST00000518136 NKX1-1Q15270 411 aaPredicted RBP12.69□□□□□ -0.38
HOXA13-202ENST00000518136 MAST1Q9Y2H9 1570 aa12.68□□□□□ -0.38
HOXA13-202ENST00000518136 SOX12O15370 315 aa12.67□□□□□ -0.38
HOXA13-202ENST00000518136 PELP1Q8IZL8 1130 aaKnown RBP12.67□□□□□ -0.38
HOXA13-202ENST00000518136 KIAA1107Q9UPP5 1409 aa12.67□□□□□ -0.38
HOXA13-202ENST00000518136 TRAPPC8Q9Y2L5 1435 aa12.67□□□□□ -0.38
HOXA13-202ENST00000518136 KDM6BO15054 1643 aa12.66□□□□□ -0.38
HOXA13-202ENST00000518136 INO80Q9ULG1 1556 aaPredicted RBP12.66□□□□□ -0.38
HOXA13-202ENST00000518136 AKNAQ7Z591 1439 aa12.66□□□□□ -0.38
HOXA13-202ENST00000518136 FAM69CQ0P6D2 419 aa12.66□□□□□ -0.38
HOXA13-202ENST00000518136 ZNF777Q9ULD5 760 aaPredicted RBP12.66□□□□□ -0.38
HOXA13-202ENST00000518136 ADGRL1O94910 1474 aa12.65□□□□□ -0.38
HOXA13-202ENST00000518136 CCDC141Q6ZP82 1450 aa12.65□□□□□ -0.38
HOXA13-202ENST00000518136 PLEKHH2Q8IVE3 1493 aa12.65□□□□□ -0.38
HOXA13-202ENST00000518136 NEO1Q92859 1461 aa12.65□□□□□ -0.38
HOXA13-202ENST00000518136 SHANK2Q9UPX8 1470 aa12.65□□□□□ -0.38
HOXA13-202ENST00000518136 KDM5CP41229 1560 aa12.64□□□□□ -0.39
HOXA13-202ENST00000518136 KIDINS220Q9ULH0 1771 aa12.64□□□□□ -0.39
HOXA13-202ENST00000518136 HNRNPMP52272 730 aaKnown RBP eCLIP12.64□□□□□ -0.39
HOXA13-202ENST00000518136 EFCAB2Q5VUJ9 269 aa12.64□□□□□ -0.39
HOXA13-202ENST00000518136 PAXIP1Q6ZW49 1069 aaPredicted RBP12.64□□□□□ -0.39
HOXA13-202ENST00000518136 ADGRL2O95490 1459 aa12.64□□□□□ -0.39
HOXA13-202ENST00000518136 ZFYVE16Q7Z3T8 1539 aa12.63□□□□□ -0.39
HOXA13-202ENST00000518136 SPRYD3Q8NCJ5 442 aa12.63□□□□□ -0.39
HOXA13-202ENST00000518136 CFAP44Q96MT7 982 aa12.63□□□□□ -0.39
HOXA13-202ENST00000518136 MFRPQ9BY79 579 aa12.63□□□□□ -0.39
HOXA13-202ENST00000518136 PLXNC1O60486 1568 aa12.63□□□□□ -0.39
HOXA13-202ENST00000518136 ITGAEP38570 1179 aa12.62□□□□□ -0.39
HOXA13-202ENST00000518136 NLRP6P59044 892 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms