RNA–Protein interactions for RNA: ENST00000517957.1

PDGFRB-204, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 4

Gene PDGFRB, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-204ENST00000517957 DAPK1P53355 1430 aa19.38■□□□□ 0.69
PDGFRB-204ENST00000517957 CHIC2Q9UKJ5 165 aa19.37■□□□□ 0.69
PDGFRB-204ENST00000517957 KDM5DQ9BY66 1539 aa19.36■□□□□ 0.69
PDGFRB-204ENST00000517957 DUOX2Q9NRD8 1548 aa19.36■□□□□ 0.69
PDGFRB-204ENST00000517957 FAM135AQ9P2D6 1515 aa19.36■□□□□ 0.69
PDGFRB-204ENST00000517957 SHANK2Q9UPX8 1470 aa19.36■□□□□ 0.69
PDGFRB-204ENST00000517957 KIF15Q9NS87 1388 aa19.36■□□□□ 0.69
PDGFRB-204ENST00000517957 FBXO31Q5XUX0 539 aaPredicted RBP19.35■□□□□ 0.69
PDGFRB-204ENST00000517957 ANKRD30AQ9BXX3 1397 aa19.34■□□□□ 0.69
PDGFRB-204ENST00000517957 DNMT1P26358 1616 aaKnown RBP19.34■□□□□ 0.69
PDGFRB-204ENST00000517957 CROCC2H7BZ55 1655 aa19.33■□□□□ 0.68
PDGFRB-204ENST00000517957 EIF2AK4Q9P2K8 1649 aaKnown RBP19.33■□□□□ 0.68
PDGFRB-204ENST00000517957 STRCQ7RTU9 1775 aa19.32■□□□□ 0.68
PDGFRB-204ENST00000517957 PPARGC1BQ86YN6 1023 aaKnown RBP19.31■□□□□ 0.68
PDGFRB-204ENST00000517957 TNRQ92752 1358 aa19.31■□□□□ 0.68
PDGFRB-204ENST00000517957 PZPP20742 1482 aa19.3■□□□□ 0.68
PDGFRB-204ENST00000517957 RNF17Q9BXT8 1623 aaKnown RBP19.3■□□□□ 0.68
PDGFRB-204ENST00000517957 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.3■□□□□ 0.68
PDGFRB-204ENST00000517957 ERBINQ96RT1 1412 aa19.29■□□□□ 0.68
PDGFRB-204ENST00000517957 CAMSAP1Q5T5Y3 1602 aa19.29■□□□□ 0.68
PDGFRB-204ENST00000517957 MYO3AQ8NEV4 1616 aa19.29■□□□□ 0.68
PDGFRB-204ENST00000517957 NCOA1Q15788 1441 aa19.28■□□□□ 0.68
PDGFRB-204ENST00000517957 FBXO41Q8TF61 875 aa19.28■□□□□ 0.68
PDGFRB-204ENST00000517957 CEP170BQ9Y4F5 1589 aaPredicted RBP19.27■□□□□ 0.68
PDGFRB-204ENST00000517957 PTPRTO14522 1441 aa19.27■□□□□ 0.68
PDGFRB-204ENST00000517957 NCKAP5LQ9HCH0 1330 aa19.26■□□□□ 0.67
PDGFRB-204ENST00000517957 ABCC3O15438 1527 aa19.26■□□□□ 0.67
PDGFRB-204ENST00000517957 PKD2Q13563 968 aa19.26■□□□□ 0.67
PDGFRB-204ENST00000517957 CERKQ8TCT0 537 aa19.26■□□□□ 0.67
PDGFRB-204ENST00000517957 KANK1Q14678 1352 aa19.26■□□□□ 0.67
PDGFRB-204ENST00000517957 A2ML1A8K2U0 1454 aa19.26■□□□□ 0.67
PDGFRB-204ENST00000517957 ZNF142P52746 1687 aaPredicted RBP19.25■□□□□ 0.67
PDGFRB-204ENST00000517957 ZC3H13Q5T200 1668 aaKnown RBP19.25■□□□□ 0.67
PDGFRB-204ENST00000517957 THEMISQ8N1K5 641 aaPredicted RBP19.24■□□□□ 0.67
PDGFRB-204ENST00000517957 MROH1Q8NDA8 1641 aa19.22■□□□□ 0.67
PDGFRB-204ENST00000517957 CFAP65Q6ZU64 1925 aaKnown RBP19.22■□□□□ 0.67
PDGFRB-204ENST00000517957 ADGRL2O95490 1459 aa19.22■□□□□ 0.67
PDGFRB-204ENST00000517957 PLA2R1Q13018 1463 aa19.22■□□□□ 0.67
PDGFRB-204ENST00000517957 NLRP1Q9C000 1473 aa19.21■□□□□ 0.67
PDGFRB-204ENST00000517957 CEP152O94986 1710 aa19.2■□□□□ 0.66
PDGFRB-204ENST00000517957 ITGAEP38570 1179 aa19.2■□□□□ 0.66
PDGFRB-204ENST00000517957 PRDM15P57071 1507 aaPredicted RBP19.19■□□□□ 0.66
PDGFRB-204ENST00000517957 ANKLE2Q86XL3 938 aa19.18■□□□□ 0.66
PDGFRB-204ENST00000517957 ANKRD50Q9ULJ7 1429 aa19.17■□□□□ 0.66
PDGFRB-204ENST00000517957 ARHGAP31Q2M1Z3 1444 aa19.17■□□□□ 0.66
PDGFRB-204ENST00000517957 ERVK-7P63135 1459 aa19.16■□□□□ 0.66
PDGFRB-204ENST00000517957 SPATA31D1Q6ZQQ2 1576 aa19.16■□□□□ 0.66
PDGFRB-204ENST00000517957 DEPDC5O75140 1603 aa19.16■□□□□ 0.66
PDGFRB-204ENST00000517957 UGGT1Q9NYU2 1555 aa19.15■□□□□ 0.66
PDGFRB-204ENST00000517957 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.15■□□□□ 0.66
PDGFRB-204ENST00000517957 ROCK1Q13464 1354 aa19.13■□□□□ 0.65
PDGFRB-204ENST00000517957 STAG3Q9UJ98 1225 aa19.11■□□□□ 0.65
PDGFRB-204ENST00000517957 LMTK2Q8IWU2 1503 aa19.1■□□□□ 0.65
PDGFRB-204ENST00000517957 ZNF335Q9H4Z2 1342 aaPredicted RBP19.09■□□□□ 0.65
PDGFRB-204ENST00000517957 VWDEQ8N2E2 1590 aa19.08■□□□□ 0.65
PDGFRB-204ENST00000517957 POLR1AO95602 1720 aaPredicted RBP19.08■□□□□ 0.64
PDGFRB-204ENST00000517957 LTBP4Q8N2S1 1624 aa19.07■□□□□ 0.64
PDGFRB-204ENST00000517957 IDI1Q13907 227 aa19.05■□□□□ 0.64
PDGFRB-204ENST00000517957 NPHP4O75161 1426 aaPredicted RBP19.04■□□□□ 0.64
PDGFRB-204ENST00000517957 TXNDC2Q86VQ3 553 aa19.04■□□□□ 0.64
PDGFRB-204ENST00000517957 SLC52A1Q9NWF4 448 aa19.04■□□□□ 0.64
PDGFRB-204ENST00000517957 RRBP1Q9P2E9 1410 aaKnown RBP19.04■□□□□ 0.64
PDGFRB-204ENST00000517957 EID1Q9Y6B2 187 aa19.04■□□□□ 0.64
PDGFRB-204ENST00000517957 EFCAB6Q5THR3 1501 aa19.03■□□□□ 0.64
PDGFRB-204ENST00000517957 UBR1Q8IWV7 1749 aa19.03■□□□□ 0.64
PDGFRB-204ENST00000517957 MED14O60244 1454 aa19.02■□□□□ 0.63
PDGFRB-204ENST00000517957 NEURL4Q96JN8 1562 aa19.02■□□□□ 0.63
PDGFRB-204ENST00000517957 NUP155O75694 1391 aa19.01■□□□□ 0.63
PDGFRB-204ENST00000517957 RPRD2Q5VT52 1461 aaKnown RBP19.01■□□□□ 0.63
PDGFRB-204ENST00000517957 NOS1P29475 1434 aa19■□□□□ 0.63
PDGFRB-204ENST00000517957 IQSEC2Q5JU85 1478 aa19■□□□□ 0.63
PDGFRB-204ENST00000517957 UNC13BO14795 1591 aa18.99■□□□□ 0.63
PDGFRB-204ENST00000517957 LTKP29376 864 aa18.99■□□□□ 0.63
PDGFRB-204ENST00000517957 TET3O43151 1660 aa18.98■□□□□ 0.63
PDGFRB-204ENST00000517957 PIK3C2BO00750 1634 aa18.98■□□□□ 0.63
PDGFRB-204ENST00000517957 SCAF11Q99590 1463 aaKnown RBP18.97■□□□□ 0.63
PDGFRB-204ENST00000517957 TMEM2Q9UHN6 1383 aa18.96■□□□□ 0.63
PDGFRB-204ENST00000517957 SLIT1O75093 1534 aa18.96■□□□□ 0.63
PDGFRB-204ENST00000517957 IQGAP1P46940 1657 aa18.96■□□□□ 0.63
PDGFRB-204ENST00000517957 SYNMO15061 1565 aa18.96■□□□□ 0.63
PDGFRB-204ENST00000517957 ARHGAP23Q9P227 1491 aa18.96■□□□□ 0.63
PDGFRB-204ENST00000517957 UBAP1LF5GYI3 381 aa18.95■□□□□ 0.62
PDGFRB-204ENST00000517957 GCC2Q8IWJ2 1684 aa18.95■□□□□ 0.62
PDGFRB-204ENST00000517957 HDGFP51858 240 aaKnown RBP18.94■□□□□ 0.62
PDGFRB-204ENST00000517957 KDM5AP29375 1690 aaKnown RBP18.93■□□□□ 0.62
PDGFRB-204ENST00000517957 CHGAP10645 457 aaKnown RBP18.93■□□□□ 0.62
PDGFRB-204ENST00000517957 CPS1P31327 1500 aa18.93■□□□□ 0.62
PDGFRB-204ENST00000517957 IQGAP3Q86VI3 1631 aa18.92■□□□□ 0.62
PDGFRB-204ENST00000517957 BCANQ96GW7 911 aa18.91■□□□□ 0.62
PDGFRB-204ENST00000517957 NAIPQ13075 1403 aa18.9■□□□□ 0.62
PDGFRB-204ENST00000517957 ADGRB3O60242 1522 aa18.9■□□□□ 0.62
PDGFRB-204ENST00000517957 E9PCH4 1651 aa18.89■□□□□ 0.61
PDGFRB-204ENST00000517957 TRIM52Q96A61 297 aa18.89■□□□□ 0.61
PDGFRB-204ENST00000517957 TOM1O60784 492 aa18.88■□□□□ 0.61
PDGFRB-204ENST00000517957 PPP1R15AO75807 674 aaPredicted RBP18.87■□□□□ 0.61
PDGFRB-204ENST00000517957 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.85■□□□□ 0.61
PDGFRB-204ENST00000517957 SLC26A8Q96RN1 970 aa18.85■□□□□ 0.61
PDGFRB-204ENST00000517957 HFM1A2PYH4 1435 aa18.84■□□□□ 0.61
PDGFRB-204ENST00000517957 SCAF1Q9H7N4 1312 aaKnown RBP18.83■□□□□ 0.61
PDGFRB-204ENST00000517957 RIMS2Q9UQ26 1411 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms