RNA–Protein interactions for RNA: ENST00000517561.1

AP3B1-202, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 5

Gene AP3B1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-202ENST00000517561 PRIM1P49642 420 aaKnown RBP13.5□□□□□ -0.25
AP3B1-202ENST00000517561 PTPREP23469 700 aa13.48□□□□□ -0.25
AP3B1-202ENST00000517561 TESPA1A2RU30 521 aaPredicted RBP13.47□□□□□ -0.25
AP3B1-202ENST00000517561 EN1Q05925 392 aaPredicted RBP13.47□□□□□ -0.25
AP3B1-202ENST00000517561 DMRTA1Q5VZB9 504 aa13.47□□□□□ -0.25
AP3B1-202ENST00000517561 MAP3K7O43318 606 aa13.46□□□□□ -0.25
AP3B1-202ENST00000517561 LSM11P83369 360 aaKnown RBP eCLIP13.46□□□□□ -0.25
AP3B1-202ENST00000517561 C6orf132Q5T0Z8 1188 aa13.46□□□□□ -0.25
AP3B1-202ENST00000517561 ANKRD13DQ6ZTN6 518 aa13.46□□□□□ -0.25
AP3B1-202ENST00000517561 KCNH8Q96L42 1107 aa13.45□□□□□ -0.26
AP3B1-202ENST00000517561 TSR1Q2NL82 804 aaKnown RBP13.44□□□□□ -0.26
AP3B1-202ENST00000517561 COL9A1P20849 921 aa13.42□□□□□ -0.26
AP3B1-202ENST00000517561 PPP1R3GB7ZBB8 358 aa13.38□□□□□ -0.27
AP3B1-202ENST00000517561 SMYD5Q6GMV2 418 aa13.38□□□□□ -0.27
AP3B1-202ENST00000517561 CDHR5Q9HBB8 845 aa13.37□□□□□ -0.27
AP3B1-202ENST00000517561 ADGRD1Q6QNK2 874 aa13.36□□□□□ -0.27
AP3B1-202ENST00000517561 ZBED2Q9BTP6 218 aa13.36□□□□□ -0.27
AP3B1-202ENST00000517561 RBM26Q5T8P6 1007 aaKnown RBP13.35□□□□□ -0.27
AP3B1-202ENST00000517561 TK2O00142 265 aa13.34□□□□□ -0.27
AP3B1-202ENST00000517561 SPNS2Q8IVW8 549 aa13.34□□□□□ -0.27
AP3B1-202ENST00000517561 VPS9D1Q9Y2B5 631 aa13.34□□□□□ -0.27
AP3B1-202ENST00000517561 NUTM2FA1L443 756 aa13.32□□□□□ -0.28
AP3B1-202ENST00000517561 PROX2Q3B8N5 592 aa13.32□□□□□ -0.28
AP3B1-202ENST00000517561 SLC4A5Q9BY07 1137 aa13.32□□□□□ -0.28
AP3B1-202ENST00000517561 NPDC1Q9NQX5 325 aaPredicted RBP13.3□□□□□ -0.28
AP3B1-202ENST00000517561 CERKQ8TCT0 537 aa13.28□□□□□ -0.28
AP3B1-202ENST00000517561 HRO43593 1189 aa13.27□□□□□ -0.29
AP3B1-202ENST00000517561 TULP1O00294 542 aaPredicted RBP13.26□□□□□ -0.29
AP3B1-202ENST00000517561 PRSS12P56730 875 aa13.26□□□□□ -0.29
AP3B1-202ENST00000517561 PTGDRQ13258 359 aa13.25□□□□□ -0.29
AP3B1-202ENST00000517561 CDCA7LQ96GN5 454 aa13.25□□□□□ -0.29
AP3B1-202ENST00000517561 TRIM6-TRIM34B2RNG4 842 aa13.24□□□□□ -0.29
AP3B1-202ENST00000517561 KIAA1468Q9P260 1216 aa13.24□□□□□ -0.29
AP3B1-202ENST00000517561 TSKSQ9UJT2 592 aa13.24□□□□□ -0.29
AP3B1-202ENST00000517561 BHMG1C9JSJ3 638 aaPredicted RBP13.23□□□□□ -0.29
AP3B1-202ENST00000517561 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.22□□□□□ -0.29
AP3B1-202ENST00000517561 STAC3Q96MF2 364 aa13.22□□□□□ -0.29
AP3B1-202ENST00000517561 FAM198AQ9UFP1 575 aa13.22□□□□□ -0.29
AP3B1-202ENST00000517561 RABGEF1Q9UJ41 708 aa13.22□□□□□ -0.29
AP3B1-202ENST00000517561 ONECUT3O60422 494 aaPredicted RBP13.21□□□□□ -0.29
AP3B1-202ENST00000517561 MMRN1Q13201 1228 aa13.21□□□□□ -0.29
AP3B1-202ENST00000517561 FCHSD2O94868 740 aa13.2□□□□□ -0.3
AP3B1-202ENST00000517561 MYT1LQ9UL68 1186 aa13.2□□□□□ -0.3
AP3B1-202ENST00000517561 PADI6Q6TGC4 694 aa13.19□□□□□ -0.3
AP3B1-202ENST00000517561 PACS2Q86VP3 889 aa13.19□□□□□ -0.3
AP3B1-202ENST00000517561 GPIHBP1Q8IV16 184 aa13.19□□□□□ -0.3
AP3B1-202ENST00000517561 LMOD2Q6P5Q4 547 aa13.17□□□□□ -0.3
AP3B1-202ENST00000517561 BCANQ96GW7 911 aa13.17□□□□□ -0.3
AP3B1-202ENST00000517561 NBPF3Q9H094 633 aa13.17□□□□□ -0.3
AP3B1-202ENST00000517561 RBM27Q9P2N5 1060 aaKnown RBP13.17□□□□□ -0.3
AP3B1-202ENST00000517561 C3orf80F5H4A9 247 aa13.16□□□□□ -0.3
AP3B1-202ENST00000517561 GPR37O15354 613 aa13.16□□□□□ -0.3
AP3B1-202ENST00000517561 MRPL50Q8N5N7 158 aaKnown RBP13.16□□□□□ -0.3
AP3B1-202ENST00000517561 TTC13Q8NBP0 860 aa13.16□□□□□ -0.3
AP3B1-202ENST00000517561 SEPT9Q9UHD8 586 aaPredicted RBP13.15□□□□□ -0.3
AP3B1-202ENST00000517561 SMAPO00193 183 aa13.13□□□□□ -0.31
AP3B1-202ENST00000517561 HIC1Q14526 733 aa13.13□□□□□ -0.31
AP3B1-202ENST00000517561 TATDN2Q93075 761 aa13.12□□□□□ -0.31
AP3B1-202ENST00000517561 RNF166Q96A37 237 aaPredicted RBP13.12□□□□□ -0.31
AP3B1-202ENST00000517561 PNMA3Q9UL41 463 aa13.12□□□□□ -0.31
AP3B1-202ENST00000517561 FECHP22830 423 aa13.11□□□□□ -0.31
AP3B1-202ENST00000517561 NUDT18Q6ZVK8 323 aa13.11□□□□□ -0.31
AP3B1-202ENST00000517561 GOLGA8CPA6NN73 597 aa13.1□□□□□ -0.31
AP3B1-202ENST00000517561 GNPATO15228 680 aa13.1□□□□□ -0.31
AP3B1-202ENST00000517561 NBPF26B4DH59 902 aa13.09□□□□□ -0.31
AP3B1-202ENST00000517561 LAPTM4BQ86VI4 370 aa13.09□□□□□ -0.31
AP3B1-202ENST00000517561 FAM161AQ3B820 660 aa13.08□□□□□ -0.32
AP3B1-202ENST00000517561 FAM98CQ17RN3 349 aaKnown RBP13.07□□□□□ -0.32
AP3B1-202ENST00000517561 KCTD12Q96CX2 325 aaKnown RBP13.07□□□□□ -0.32
AP3B1-202ENST00000517561 ZFRQ96KR1 1074 aaKnown RBP13.06□□□□□ -0.32
AP3B1-202ENST00000517561 WNT2BQ93097 391 aa13.05□□□□□ -0.32
AP3B1-202ENST00000517561 ADGRG1Q9Y653 693 aa13.05□□□□□ -0.32
AP3B1-202ENST00000517561 EYA1Q99502 592 aa13.04□□□□□ -0.32
AP3B1-202ENST00000517561 ZC3H15Q8WU90 426 aaKnown RBP13.02□□□□□ -0.33
AP3B1-202ENST00000517561 ANKK1Q8NFD2 765 aa13□□□□□ -0.33
AP3B1-202ENST00000517561 RBM46Q8TBY0 533 aaKnown RBP13□□□□□ -0.33
AP3B1-202ENST00000517561 THSD4Q6ZMP0 1018 aa12.98□□□□□ -0.33
AP3B1-202ENST00000517561 OATP04181 439 aa12.97□□□□□ -0.33
AP3B1-202ENST00000517561 BCAMP50895 628 aa12.97□□□□□ -0.33
AP3B1-202ENST00000517561 SAMD7Q7Z3H4 446 aa12.97□□□□□ -0.33
AP3B1-202ENST00000517561 ZMYND10O75800 440 aa12.96□□□□□ -0.33
AP3B1-202ENST00000517561 PTPN5P54829 565 aa12.96□□□□□ -0.33
AP3B1-202ENST00000517561 PXYLP1Q8TE99 480 aa12.96□□□□□ -0.33
AP3B1-202ENST00000517561 SOWAHBA6NEL2 793 aa12.95□□□□□ -0.34
AP3B1-202ENST00000517561 MAP2K5Q13163 448 aa12.95□□□□□ -0.34
AP3B1-202ENST00000517561 RCCD1A6NED2 376 aa12.94□□□□□ -0.34
AP3B1-202ENST00000517561 METTL3Q86U44 580 aaKnown RBP12.94□□□□□ -0.34
AP3B1-202ENST00000517561 LRCH3Q96II8 777 aa12.94□□□□□ -0.34
AP3B1-202ENST00000517561 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.94□□□□□ -0.34
AP3B1-202ENST00000517561 IRF6O14896 467 aa12.93□□□□□ -0.34
AP3B1-202ENST00000517561 HDGFP51858 240 aaKnown RBP12.93□□□□□ -0.34
AP3B1-202ENST00000517561 SWT1Q5T5J6 900 aaKnown RBP12.93□□□□□ -0.34
AP3B1-202ENST00000517561 BARGINQ6ZT62 677 aa12.93□□□□□ -0.34
AP3B1-202ENST00000517561 HCSTQ9UBK5 93 aa12.93□□□□□ -0.34
AP3B1-202ENST00000517561 MINK1Q8N4C8 1332 aaPredicted RBP12.92□□□□□ -0.34
AP3B1-202ENST00000517561 DNAJB2P25686 324 aa12.92□□□□□ -0.34
AP3B1-202ENST00000517561 KRI1Q8N9T8 703 aaKnown RBP12.92□□□□□ -0.34
AP3B1-202ENST00000517561 PHOX2BQ99453 314 aa12.91□□□□□ -0.34
AP3B1-202ENST00000517561 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.89□□□□□ -0.35
AP3B1-202ENST00000517561 NLRP7Q8WX94 980 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms