RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 MAP3K7O43318 606 aa10.73□□□□□ -0.69
CTNNA1-202ENST00000517533 ERICH6Q7L0X2 663 aa10.73□□□□□ -0.69
CTNNA1-202ENST00000517533 ZNF316A6NFI3 1004 aaPredicted RBP10.72□□□□□ -0.69
CTNNA1-202ENST00000517533 HOXB3P14651 431 aaPredicted RBP10.72□□□□□ -0.69
CTNNA1-202ENST00000517533 SLAIN1Q8ND83 568 aa10.72□□□□□ -0.69
CTNNA1-202ENST00000517533 MS4A1P11836 297 aa10.71□□□□□ -0.69
CTNNA1-202ENST00000517533 FOSBP53539 338 aa10.7□□□□□ -0.7
CTNNA1-202ENST00000517533 FAM161AQ3B820 660 aa10.7□□□□□ -0.7
CTNNA1-202ENST00000517533 TYW1BQ6NUM6 668 aa10.7□□□□□ -0.7
CTNNA1-202ENST00000517533 TMUB1Q9BVT8 246 aa10.7□□□□□ -0.7
CTNNA1-202ENST00000517533 JPH4Q96JJ6 628 aa10.69□□□□□ -0.7
CTNNA1-202ENST00000517533 GIGYF2Q6Y7W6 1299 aaKnown RBP10.68□□□□□ -0.7
CTNNA1-202ENST00000517533 NUDT7P0C024 238 aa10.67□□□□□ -0.7
CTNNA1-202ENST00000517533 TTLL12Q14166 644 aaPredicted RBP10.67□□□□□ -0.7
CTNNA1-202ENST00000517533 ARSIQ5FYB1 569 aa10.67□□□□□ -0.7
CTNNA1-202ENST00000517533 NLRP7Q8WX94 980 aa10.66□□□□□ -0.7
CTNNA1-202ENST00000517533 DDRGK1Q96HY6 314 aa10.65□□□□□ -0.7
CTNNA1-202ENST00000517533 C6orf132Q5T0Z8 1188 aa10.64□□□□□ -0.71
CTNNA1-202ENST00000517533 GPR153Q6NV75 609 aa10.64□□□□□ -0.71
CTNNA1-202ENST00000517533 ADAM33Q9BZ11 813 aa10.64□□□□□ -0.71
CTNNA1-202ENST00000517533 SUPT5HO00267 1087 aaKnown RBP10.63□□□□□ -0.71
CTNNA1-202ENST00000517533 MDM2Q00987 491 aaPredicted RBP10.63□□□□□ -0.71
CTNNA1-202ENST00000517533 PADI6Q6TGC4 694 aa10.63□□□□□ -0.71
CTNNA1-202ENST00000517533 ZNF454Q8N9F8 522 aa10.63□□□□□ -0.71
CTNNA1-202ENST00000517533 FBXW7Q969H0 707 aa10.63□□□□□ -0.71
CTNNA1-202ENST00000517533 TTC13Q8NBP0 860 aa10.62□□□□□ -0.71
CTNNA1-202ENST00000517533 ZDHHC16Q969W1 377 aa10.6□□□□□ -0.71
CTNNA1-202ENST00000517533 FAM198AQ9UFP1 575 aa10.6□□□□□ -0.71
CTNNA1-202ENST00000517533 ADGRG1Q9Y653 693 aa10.6□□□□□ -0.71
CTNNA1-202ENST00000517533 METTL3Q86U44 580 aaKnown RBP10.59□□□□□ -0.71
CTNNA1-202ENST00000517533 PXYLP1Q8TE99 480 aa10.57□□□□□ -0.72
CTNNA1-202ENST00000517533 GPCPD1Q9NPB8 672 aa10.57□□□□□ -0.72
CTNNA1-202ENST00000517533 LHX6Q9UPM6 363 aa10.57□□□□□ -0.72
CTNNA1-202ENST00000517533 C3orf80F5H4A9 247 aa10.56□□□□□ -0.72
CTNNA1-202ENST00000517533 COL9A1P20849 921 aa10.56□□□□□ -0.72
CTNNA1-202ENST00000517533 DOK7Q18PE1 504 aa10.56□□□□□ -0.72
CTNNA1-202ENST00000517533 SSTR3P32745 418 aaPredicted RBP10.55□□□□□ -0.72
CTNNA1-202ENST00000517533 CLCN1P35523 988 aa10.55□□□□□ -0.72
CTNNA1-202ENST00000517533 GOPCQ9HD26 462 aa10.54□□□□□ -0.72
CTNNA1-202ENST00000517533 FAM217BQ9NTX9 383 aaPredicted RBP10.54□□□□□ -0.72
CTNNA1-202ENST00000517533 ONECUT3O60422 494 aaPredicted RBP10.53□□□□□ -0.72
CTNNA1-202ENST00000517533 PRSS12P56730 875 aa10.53□□□□□ -0.72
CTNNA1-202ENST00000517533 CERKQ8TCT0 537 aa10.52□□□□□ -0.73
CTNNA1-202ENST00000517533 CDCA7LQ96GN5 454 aa10.52□□□□□ -0.73
CTNNA1-202ENST00000517533 ZSWIM6Q9HCJ5 1215 aa10.52□□□□□ -0.73
CTNNA1-202ENST00000517533 ZMYND15Q9H091 742 aa10.51□□□□□ -0.73
CTNNA1-202ENST00000517533 RBM27Q9P2N5 1060 aaKnown RBP10.51□□□□□ -0.73
CTNNA1-202ENST00000517533 OATP04181 439 aa10.5□□□□□ -0.73
CTNNA1-202ENST00000517533 SH3D19Q5HYK7 790 aa10.5□□□□□ -0.73
CTNNA1-202ENST00000517533 BEGAINQ9BUH8 593 aa10.5□□□□□ -0.73
CTNNA1-202ENST00000517533 PROCA1Q8NCQ7 364 aaPredicted RBP10.49□□□□□ -0.73
CTNNA1-202ENST00000517533 TSKSQ9UJT2 592 aa10.49□□□□□ -0.73
CTNNA1-202ENST00000517533 RIMBP2O15034 1052 aa10.47□□□□□ -0.73
CTNNA1-202ENST00000517533 FBXO31Q5XUX0 539 aaPredicted RBP10.47□□□□□ -0.73
CTNNA1-202ENST00000517533 EYA1Q99502 592 aa10.47□□□□□ -0.73
CTNNA1-202ENST00000517533 BCL2L12Q9HB09 334 aa10.47□□□□□ -0.73
CTNNA1-202ENST00000517533 SCUBE2Q9NQ36 999 aa10.47□□□□□ -0.73
CTNNA1-202ENST00000517533 ZNF710Q8N1W2 664 aa10.46□□□□□ -0.73
CTNNA1-202ENST00000517533 PCMTD1Q96MG8 357 aaPredicted RBP10.46□□□□□ -0.73
CTNNA1-202ENST00000517533 SKIV2LQ15477 1246 aaKnown RBP10.44□□□□□ -0.74
CTNNA1-202ENST00000517533 PPP4R3BQ5MIZ7 849 aa10.44□□□□□ -0.74
CTNNA1-202ENST00000517533 MYSM1Q5VVJ2 828 aa10.44□□□□□ -0.74
CTNNA1-202ENST00000517533 POLR3EQ9NVU0 708 aa10.44□□□□□ -0.74
CTNNA1-202ENST00000517533 RCCD1A6NED2 376 aa10.43□□□□□ -0.74
CTNNA1-202ENST00000517533 HOXB1P14653 301 aaPredicted RBP10.43□□□□□ -0.74
CTNNA1-202ENST00000517533 C1orf115Q9H7X2 142 aa10.43□□□□□ -0.74
CTNNA1-202ENST00000517533 MAMSTRQ6ZN01 415 aa10.42□□□□□ -0.74
CTNNA1-202ENST00000517533 PPP1R3GB7ZBB8 358 aa10.41□□□□□ -0.74
CTNNA1-202ENST00000517533 RBM46Q8TBY0 533 aaKnown RBP10.41□□□□□ -0.74
CTNNA1-202ENST00000517533 PROX2Q3B8N5 592 aa10.4□□□□□ -0.74
CTNNA1-202ENST00000517533 NUDT18Q6ZVK8 323 aa10.4□□□□□ -0.74
CTNNA1-202ENST00000517533 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.4□□□□□ -0.74
CTNNA1-202ENST00000517533 TBC1D2Q9BYX2 928 aa10.4□□□□□ -0.74
CTNNA1-202ENST00000517533 RSPH6AQ9H0K4 717 aa10.4□□□□□ -0.74
CTNNA1-202ENST00000517533 SMAPO00193 183 aa10.39□□□□□ -0.75
CTNNA1-202ENST00000517533 OTUD5Q96G74 571 aa10.39□□□□□ -0.75
CTNNA1-202ENST00000517533 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.38□□□□□ -0.75
CTNNA1-202ENST00000517533 PTPREP23469 700 aa10.38□□□□□ -0.75
CTNNA1-202ENST00000517533 FLIIQ13045 1269 aa10.38□□□□□ -0.75
CTNNA1-202ENST00000517533 TRIM6-TRIM34B2RNG4 842 aa10.37□□□□□ -0.75
CTNNA1-202ENST00000517533 MCM6Q14566 821 aa10.37□□□□□ -0.75
CTNNA1-202ENST00000517533 TATDN2Q93075 761 aa10.37□□□□□ -0.75
CTNNA1-202ENST00000517533 CLUAP1Q96AJ1 413 aa10.37□□□□□ -0.75
CTNNA1-202ENST00000517533 PODXL2Q9NZ53 605 aa10.37□□□□□ -0.75
CTNNA1-202ENST00000517533 LIMD1Q9UGP4 676 aa10.37□□□□□ -0.75
CTNNA1-202ENST00000517533 PSDA5PKW4 1024 aaPredicted RBP10.36□□□□□ -0.75
CTNNA1-202ENST00000517533 CD46P15529 392 aa10.36□□□□□ -0.75
CTNNA1-202ENST00000517533 POTEEQ6S8J3 1075 aa10.36□□□□□ -0.75
CTNNA1-202ENST00000517533 SPIRE2Q8WWL2 714 aa10.36□□□□□ -0.75
CTNNA1-202ENST00000517533 PNMA3Q9UL41 463 aa10.36□□□□□ -0.75
CTNNA1-202ENST00000517533 KCNK17Q96T54 332 aa10.35□□□□□ -0.75
CTNNA1-202ENST00000517533 ARID3CA6NKF2 412 aa10.34□□□□□ -0.75
CTNNA1-202ENST00000517533 CLK2P49760 499 aaKnown RBP10.34□□□□□ -0.75
CTNNA1-202ENST00000517533 TMEM134Q9H6X4 195 aa10.33□□□□□ -0.76
CTNNA1-202ENST00000517533 PSEN2P49810 448 aa10.32□□□□□ -0.76
CTNNA1-202ENST00000517533 POM121Q96HA1 1249 aa10.32□□□□□ -0.76
CTNNA1-202ENST00000517533 DDX11L8A8MPP1 907 aa10.31□□□□□ -0.76
CTNNA1-202ENST00000517533 NBPF26B4DH59 902 aa10.31□□□□□ -0.76
CTNNA1-202ENST00000517533 DNAJB2P25686 324 aa10.31□□□□□ -0.76
CTNNA1-202ENST00000517533 ZBED2Q9BTP6 218 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms