RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 CALR3Q96L12 384 aaKnown RBP4.32□□□□□ -1.72
SCARNA11.3-201ENST00000517276 TMEM106CQ9BVX2 250 aa4.32□□□□□ -1.72
SCARNA11.3-201ENST00000517276 GDPD2Q9HCC8 539 aa4.32□□□□□ -1.72
SCARNA11.3-201ENST00000517276 USP35Q9P2H5 1018 aa4.32□□□□□ -1.72
SCARNA11.3-201ENST00000517276 TRPC6Q9Y210 931 aa4.32□□□□□ -1.72
SCARNA11.3-201ENST00000517276 ACIN1Q9UKV3 1341 aaKnown RBP4.31□□□□□ -1.72
SCARNA11.3-201ENST00000517276 PPP1R15AO75807 674 aaPredicted RBP4.31□□□□□ -1.72
SCARNA11.3-201ENST00000517276 RFX1P22670 979 aa4.31□□□□□ -1.72
SCARNA11.3-201ENST00000517276 RFC5P40937 340 aa4.31□□□□□ -1.72
SCARNA11.3-201ENST00000517276 DPY19L2Q6NUT2 758 aa4.31□□□□□ -1.72
SCARNA11.3-201ENST00000517276 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.31□□□□□ -1.72
SCARNA11.3-201ENST00000517276 GPCPD1Q9NPB8 672 aa4.31□□□□□ -1.72
SCARNA11.3-201ENST00000517276 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.3□□□□□ -1.72
SCARNA11.3-201ENST00000517276 CLCN1P35523 988 aa4.3□□□□□ -1.72
SCARNA11.3-201ENST00000517276 ABL2P42684 1182 aa4.3□□□□□ -1.72
SCARNA11.3-201ENST00000517276 FOXK1P85037 733 aa4.3□□□□□ -1.72
SCARNA11.3-201ENST00000517276 MYSM1Q5VVJ2 828 aa4.3□□□□□ -1.72
SCARNA11.3-201ENST00000517276 TMC2Q8TDI7 906 aa4.3□□□□□ -1.72
SCARNA11.3-201ENST00000517276 GLMNQ92990 594 aa4.3□□□□□ -1.72
SCARNA11.3-201ENST00000517276 CDHR5Q9HBB8 845 aa4.3□□□□□ -1.72
SCARNA11.3-201ENST00000517276 IVNS1ABPQ9Y6Y0 642 aa4.3□□□□□ -1.72
SCARNA11.3-201ENST00000517276 TBC1D12O60347 775 aa4.29□□□□□ -1.72
SCARNA11.3-201ENST00000517276 PAK3O75914 559 aaPredicted RBP4.29□□□□□ -1.72
SCARNA11.3-201ENST00000517276 CLK2P49760 499 aaKnown RBP4.29□□□□□ -1.72
SCARNA11.3-201ENST00000517276 KCNA1Q09470 495 aa4.29□□□□□ -1.72
SCARNA11.3-201ENST00000517276 FAM161AQ3B820 660 aa4.29□□□□□ -1.72
SCARNA11.3-201ENST00000517276 MTMR14Q8NCE2 650 aa4.29□□□□□ -1.72
SCARNA11.3-201ENST00000517276 UNCXA6NJT0 531 aa4.28□□□□□ -1.72
SCARNA11.3-201ENST00000517276 BRD1O95696 1058 aa4.28□□□□□ -1.72
SCARNA11.3-201ENST00000517276 PRKAR2AP13861 404 aaKnown RBP4.28□□□□□ -1.72
SCARNA11.3-201ENST00000517276 CCDC27Q2M243 656 aa4.28□□□□□ -1.72
SCARNA11.3-201ENST00000517276 BANK1Q8NDB2 785 aa4.28□□□□□ -1.72
SCARNA11.3-201ENST00000517276 PHF12Q96QT6 1004 aa4.28□□□□□ -1.72
SCARNA11.3-201ENST00000517276 FAM217BQ9NTX9 383 aaPredicted RBP4.28□□□□□ -1.72
SCARNA11.3-201ENST00000517276 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.28□□□□□ -1.72
SCARNA11.3-201ENST00000517276 TBC1D2BQ9UPU7 963 aa4.28□□□□□ -1.72
SCARNA11.3-201ENST00000517276 C2orf72A6NCS6 295 aa4.27□□□□□ -1.73
SCARNA11.3-201ENST00000517276 CDK11BP21127 795 aaKnown RBP4.27□□□□□ -1.73
SCARNA11.3-201ENST00000517276 MICALL2Q8IY33 904 aa4.27□□□□□ -1.73
SCARNA11.3-201ENST00000517276 PBXIP1Q96AQ6 731 aa4.27□□□□□ -1.73
SCARNA11.3-201ENST00000517276 NPDC1Q9NQX5 325 aaPredicted RBP4.27□□□□□ -1.73
SCARNA11.3-201ENST00000517276 LIMD1Q9UGP4 676 aa4.27□□□□□ -1.73
SCARNA11.3-201ENST00000517276 MYT1LQ9UL68 1186 aa4.27□□□□□ -1.73
SCARNA11.3-201ENST00000517276 CDK11AQ9UQ88 783 aaPredicted RBP4.27□□□□□ -1.73
SCARNA11.3-201ENST00000517276 HSP90B1P14625 803 aaKnown RBP4.26□□□□□ -1.73
SCARNA11.3-201ENST00000517276 PTGER2P43116 358 aa4.26□□□□□ -1.73
SCARNA11.3-201ENST00000517276 PDE4CQ08493 712 aa4.26□□□□□ -1.73
SCARNA11.3-201ENST00000517276 ADAMTS19Q8TE59 1207 aa4.26□□□□□ -1.73
SCARNA11.3-201ENST00000517276 TBC1D2Q9BYX2 928 aa4.26□□□□□ -1.73
SCARNA11.3-201ENST00000517276 PATL2C9JE40 543 aaKnown RBP4.25□□□□□ -1.73
SCARNA11.3-201ENST00000517276 CSB-PGBD3P0DP91 1061 aa4.25□□□□□ -1.73
SCARNA11.3-201ENST00000517276 CFAP70Q5T0N1 1121 aa4.25□□□□□ -1.73
SCARNA11.3-201ENST00000517276 ILDR1Q86SU0 546 aaPredicted RBP4.25□□□□□ -1.73
SCARNA11.3-201ENST00000517276 USTQ9Y2C2 406 aa4.25□□□□□ -1.73
SCARNA11.3-201ENST00000517276 AMOTL2Q9Y2J4 779 aa4.25□□□□□ -1.73
SCARNA11.3-201ENST00000517276 KIF3CO14782 793 aa4.24□□□□□ -1.73
SCARNA11.3-201ENST00000517276 SRPK2P78362 688 aaKnown RBP4.24□□□□□ -1.73
SCARNA11.3-201ENST00000517276 CSPP1Q1MSJ5 1256 aa4.24□□□□□ -1.73
SCARNA11.3-201ENST00000517276 TMEM259Q4ZIN3 620 aa4.24□□□□□ -1.73
SCARNA11.3-201ENST00000517276 CDCA8Q53HL2 280 aa4.24□□□□□ -1.73
SCARNA11.3-201ENST00000517276 HDGFL1Q5TGJ6 251 aa4.24□□□□□ -1.73
SCARNA11.3-201ENST00000517276 SND1Q7KZF4 910 aaKnown RBP eCLIP4.24□□□□□ -1.73
SCARNA11.3-201ENST00000517276 WWC1Q8IX03 1113 aa4.24□□□□□ -1.73
SCARNA11.3-201ENST00000517276 PUS7Q96PZ0 661 aaKnown RBP4.24□□□□□ -1.73
SCARNA11.3-201ENST00000517276 ZRANB1Q9UGI0 708 aa4.24□□□□□ -1.73
SCARNA11.3-201ENST00000517276 EVI5O60447 810 aa4.23□□□□□ -1.73
SCARNA11.3-201ENST00000517276 CACNB1Q02641 598 aaPredicted RBP4.23□□□□□ -1.73
SCARNA11.3-201ENST00000517276 PPP2R2DQ66LE6 453 aa4.23□□□□□ -1.73
SCARNA11.3-201ENST00000517276 RBM33Q96EV2 1170 aaKnown RBP4.23□□□□□ -1.73
SCARNA11.3-201ENST00000517276 MS4A3Q96HJ5 214 aa4.23□□□□□ -1.73
SCARNA11.3-201ENST00000517276 AP1G2O75843 785 aa4.22□□□□□ -1.73
SCARNA11.3-201ENST00000517276 HMGB1P09429 215 aaKnown RBP4.22□□□□□ -1.73
SCARNA11.3-201ENST00000517276 TSR1Q2NL82 804 aaKnown RBP4.22□□□□□ -1.73
SCARNA11.3-201ENST00000517276 RIC3Q7Z5B4 369 aa4.22□□□□□ -1.73
SCARNA11.3-201ENST00000517276 METTL3Q86U44 580 aaKnown RBP4.22□□□□□ -1.73
SCARNA11.3-201ENST00000517276 VRTNQ9H8Y1 702 aa4.22□□□□□ -1.73
SCARNA11.3-201ENST00000517276 TMEM88BA6NKF7 163 aa4.21□□□□□ -1.74
SCARNA11.3-201ENST00000517276 MAP3K7O43318 606 aa4.21□□□□□ -1.74
SCARNA11.3-201ENST00000517276 QPCTQ16769 361 aa4.21□□□□□ -1.74
SCARNA11.3-201ENST00000517276 PELP1Q8IZL8 1130 aaKnown RBP4.21□□□□□ -1.74
SCARNA11.3-201ENST00000517276 PPP1R12CQ9BZL4 782 aa4.21□□□□□ -1.74
SCARNA11.3-201ENST00000517276 PALM3A6NDB9 673 aaPredicted RBP4.2□□□□□ -1.74
SCARNA11.3-201ENST00000517276 TTLL13PA6NNM8 815 aa4.2□□□□□ -1.74
SCARNA11.3-201ENST00000517276 LMOD1P29536 600 aaPredicted RBP4.2□□□□□ -1.74
SCARNA11.3-201ENST00000517276 EN1Q05925 392 aaPredicted RBP4.2□□□□□ -1.74
SCARNA11.3-201ENST00000517276 RTL5Q5HYW3 569 aaPredicted RBP4.2□□□□□ -1.74
SCARNA11.3-201ENST00000517276 RSPH4AQ5TD94 716 aa4.2□□□□□ -1.74
SCARNA11.3-201ENST00000517276 TMEM92Q6UXU6 159 aa4.2□□□□□ -1.74
SCARNA11.3-201ENST00000517276 FAM177A1Q8N128 213 aaPredicted RBP4.2□□□□□ -1.74
SCARNA11.3-201ENST00000517276 ZNF710Q8N1W2 664 aa4.2□□□□□ -1.74
SCARNA11.3-201ENST00000517276 SPIRE2Q8WWL2 714 aa4.2□□□□□ -1.74
SCARNA11.3-201ENST00000517276 IGSF5Q9NSI5 407 aa4.2□□□□□ -1.74
SCARNA11.3-201ENST00000517276 KIAA1522Q9P206 1035 aaPredicted RBP4.2□□□□□ -1.74
SCARNA11.3-201ENST00000517276 USP17L8P0C7I0 530 aa4.19□□□□□ -1.74
SCARNA11.3-201ENST00000517276 VAC14Q08AM6 782 aa4.19□□□□□ -1.74
SCARNA11.3-201ENST00000517276 PADI6Q6TGC4 694 aa4.19□□□□□ -1.74
SCARNA11.3-201ENST00000517276 PDCD7Q8N8D1 485 aaKnown RBP4.19□□□□□ -1.74
SCARNA11.3-201ENST00000517276 PXYLP1Q8TE99 480 aa4.19□□□□□ -1.74
SCARNA11.3-201ENST00000517276 GJD4Q96KN9 370 aaPredicted RBP4.19□□□□□ -1.74
SCARNA11.3-201ENST00000517276 MOXD2PA6NHM9 499 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms