RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 PKD2Q13563 968 aa13.32□□□□□ -0.28
SCARNA20.3-201ENST00000516913 NEURL4Q96JN8 1562 aa13.32□□□□□ -0.28
SCARNA20.3-201ENST00000516913 ZNF142P52746 1687 aaPredicted RBP13.31□□□□□ -0.28
SCARNA20.3-201ENST00000516913 LRRC9Q6ZRR7 1453 aa13.31□□□□□ -0.28
SCARNA20.3-201ENST00000516913 TNRQ92752 1358 aa13.31□□□□□ -0.28
SCARNA20.3-201ENST00000516913 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.3□□□□□ -0.28
SCARNA20.3-201ENST00000516913 MIA2Q96PC5 1412 aa13.3□□□□□ -0.28
SCARNA20.3-201ENST00000516913 PZPP20742 1482 aa13.29□□□□□ -0.28
SCARNA20.3-201ENST00000516913 VPS8Q8N3P4 1428 aa13.29□□□□□ -0.28
SCARNA20.3-201ENST00000516913 UBAP1LF5GYI3 381 aa13.28□□□□□ -0.28
SCARNA20.3-201ENST00000516913 WASHC2CQ9Y4E1 1318 aa13.28□□□□□ -0.28
SCARNA20.3-201ENST00000516913 IQSEC2Q5JU85 1478 aa13.28□□□□□ -0.28
SCARNA20.3-201ENST00000516913 ALKQ9UM73 1620 aa13.28□□□□□ -0.28
SCARNA20.3-201ENST00000516913 ARHGEF5Q12774 1597 aa13.27□□□□□ -0.29
SCARNA20.3-201ENST00000516913 MROH1Q8NDA8 1641 aa13.26□□□□□ -0.29
SCARNA20.3-201ENST00000516913 KDM5DQ9BY66 1539 aa13.25□□□□□ -0.29
SCARNA20.3-201ENST00000516913 RSPH4AQ5TD94 716 aa13.25□□□□□ -0.29
SCARNA20.3-201ENST00000516913 VWDEQ8N2E2 1590 aa13.24□□□□□ -0.29
SCARNA20.3-201ENST00000516913 ABCC3O15438 1527 aa13.24□□□□□ -0.29
SCARNA20.3-201ENST00000516913 SOCS7O14512 581 aa13.24□□□□□ -0.29
SCARNA20.3-201ENST00000516913 HSPA1LP34931 641 aa13.24□□□□□ -0.29
SCARNA20.3-201ENST00000516913 SHANK2Q9UPX8 1470 aa13.23□□□□□ -0.29
SCARNA20.3-201ENST00000516913 ABCC5O15440 1437 aa13.22□□□□□ -0.29
SCARNA20.3-201ENST00000516913 TSPY4P0CV99 314 aa13.22□□□□□ -0.29
SCARNA20.3-201ENST00000516913 TSPY10P0CW01 314 aa13.22□□□□□ -0.29
SCARNA20.3-201ENST00000516913 LTKP29376 864 aa13.22□□□□□ -0.29
SCARNA20.3-201ENST00000516913 MYOM3Q5VTT5 1437 aa13.22□□□□□ -0.29
SCARNA20.3-201ENST00000516913 MED14O60244 1454 aa13.21□□□□□ -0.3
SCARNA20.3-201ENST00000516913 SPATA31D1Q6ZQQ2 1576 aa13.2□□□□□ -0.3
SCARNA20.3-201ENST00000516913 MAST1Q9Y2H9 1570 aa13.2□□□□□ -0.3
SCARNA20.3-201ENST00000516913 ANKLE2Q86XL3 938 aa13.2□□□□□ -0.3
SCARNA20.3-201ENST00000516913 ERVK-7P63135 1459 aa13.2□□□□□ -0.3
SCARNA20.3-201ENST00000516913 RNF17Q9BXT8 1623 aaKnown RBP13.2□□□□□ -0.3
SCARNA20.3-201ENST00000516913 PIP4K2BP78356 416 aa13.19□□□□□ -0.3
SCARNA20.3-201ENST00000516913 THEMISQ8N1K5 641 aaPredicted RBP13.19□□□□□ -0.3
SCARNA20.3-201ENST00000516913 NPHP4O75161 1426 aaPredicted RBP13.19□□□□□ -0.3
SCARNA20.3-201ENST00000516913 STRCP1A6NGW2 1772 aa13.19□□□□□ -0.3
SCARNA20.3-201ENST00000516913 MAP3K1Q13233 1512 aa13.18□□□□□ -0.3
SCARNA20.3-201ENST00000516913 NLRP1Q9C000 1473 aa13.18□□□□□ -0.3
SCARNA20.3-201ENST00000516913 RRP7BPQ9NSQ0 103 aa13.18□□□□□ -0.3
SCARNA20.3-201ENST00000516913 UGGT1Q9NYU2 1555 aa13.18□□□□□ -0.3
SCARNA20.3-201ENST00000516913 FAM135AQ9P2D6 1515 aa13.17□□□□□ -0.3
SCARNA20.3-201ENST00000516913 LRRC7Q96NW7 1537 aa13.15□□□□□ -0.3
SCARNA20.3-201ENST00000516913 KIF15Q9NS87 1388 aa13.15□□□□□ -0.3
SCARNA20.3-201ENST00000516913 CHIC2Q9UKJ5 165 aa13.14□□□□□ -0.31
SCARNA20.3-201ENST00000516913 POLR1AO95602 1720 aaPredicted RBP13.13□□□□□ -0.31
SCARNA20.3-201ENST00000516913 ARHGAP23Q9P227 1491 aa13.13□□□□□ -0.31
SCARNA20.3-201ENST00000516913 DEPDC5O75140 1603 aa13.13□□□□□ -0.31
SCARNA20.3-201ENST00000516913 CPS1P31327 1500 aa13.13□□□□□ -0.31
SCARNA20.3-201ENST00000516913 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.12□□□□□ -0.31
SCARNA20.3-201ENST00000516913 DUOX2Q9NRD8 1548 aa13.12□□□□□ -0.31
SCARNA20.3-201ENST00000516913 DAPK1P53355 1430 aa13.12□□□□□ -0.31
SCARNA20.3-201ENST00000516913 ARHGAP31Q2M1Z3 1444 aa13.12□□□□□ -0.31
SCARNA20.3-201ENST00000516913 SCAF1Q9H7N4 1312 aaKnown RBP13.12□□□□□ -0.31
SCARNA20.3-201ENST00000516913 CEP152O94986 1710 aa13.11□□□□□ -0.31
SCARNA20.3-201ENST00000516913 IDI1Q13907 227 aa13.11□□□□□ -0.31
SCARNA20.3-201ENST00000516913 SENP3Q9H4L4 574 aaPredicted RBP13.11□□□□□ -0.31
SCARNA20.3-201ENST00000516913 FGD6Q6ZV73 1430 aa13.11□□□□□ -0.31
SCARNA20.3-201ENST00000516913 CFAP65Q6ZU64 1925 aaKnown RBP13.11□□□□□ -0.31
SCARNA20.3-201ENST00000516913 ZC3H13Q5T200 1668 aaKnown RBP13.1□□□□□ -0.31
SCARNA20.3-201ENST00000516913 TXNDC2Q86VQ3 553 aa13.1□□□□□ -0.31
SCARNA20.3-201ENST00000516913 EIF2AK4Q9P2K8 1649 aaKnown RBP13.1□□□□□ -0.31
SCARNA20.3-201ENST00000516913 PRDM15P57071 1507 aaPredicted RBP13.09□□□□□ -0.31
SCARNA20.3-201ENST00000516913 TOM1O60784 492 aa13.09□□□□□ -0.31
SCARNA20.3-201ENST00000516913 UBR1Q8IWV7 1749 aa13.09□□□□□ -0.31
SCARNA20.3-201ENST00000516913 RBM33Q96EV2 1170 aaKnown RBP13.09□□□□□ -0.31
SCARNA20.3-201ENST00000516913 RGS17Q9UGC6 210 aaPredicted RBP13.09□□□□□ -0.31
SCARNA20.3-201ENST00000516913 PTPN23Q9H3S7 1636 aa13.09□□□□□ -0.31
SCARNA20.3-201ENST00000516913 IQGAP1P46940 1657 aa13.08□□□□□ -0.31
SCARNA20.3-201ENST00000516913 SLIT1O75093 1534 aa13.08□□□□□ -0.31
SCARNA20.3-201ENST00000516913 SCAF11Q99590 1463 aaKnown RBP13.08□□□□□ -0.32
SCARNA20.3-201ENST00000516913 MED1Q15648 1581 aaPredicted RBP13.07□□□□□ -0.32
SCARNA20.3-201ENST00000516913 TMEM2Q9UHN6 1383 aa13.07□□□□□ -0.32
SCARNA20.3-201ENST00000516913 ERBINQ96RT1 1412 aa13.06□□□□□ -0.32
SCARNA20.3-201ENST00000516913 SYNMO15061 1565 aa13.06□□□□□ -0.32
SCARNA20.3-201ENST00000516913 NOS1P29475 1434 aa13.05□□□□□ -0.32
SCARNA20.3-201ENST00000516913 PIK3C2BO00750 1634 aa13.05□□□□□ -0.32
SCARNA20.3-201ENST00000516913 SLC26A8Q96RN1 970 aa13.04□□□□□ -0.32
SCARNA20.3-201ENST00000516913 CROCC2H7BZ55 1655 aa13.04□□□□□ -0.32
SCARNA20.3-201ENST00000516913 LMTK2Q8IWU2 1503 aa13.03□□□□□ -0.32
SCARNA20.3-201ENST00000516913 TET3O43151 1660 aa13.03□□□□□ -0.32
SCARNA20.3-201ENST00000516913 XIRP1Q702N8 1843 aaKnown RBP13.03□□□□□ -0.32
SCARNA20.3-201ENST00000516913 TMEM94Q12767 1356 aa13.01□□□□□ -0.33
SCARNA20.3-201ENST00000516913 ADGRL2O95490 1459 aa13□□□□□ -0.33
SCARNA20.3-201ENST00000516913 ANKRD30AQ9BXX3 1397 aa12.99□□□□□ -0.33
SCARNA20.3-201ENST00000516913 ZFYVE9O95405 1425 aa12.98□□□□□ -0.33
SCARNA20.3-201ENST00000516913 KCNA6P17658 529 aa12.98□□□□□ -0.33
SCARNA20.3-201ENST00000516913 FAM50AQ14320 339 aaKnown RBP12.98□□□□□ -0.33
SCARNA20.3-201ENST00000516913 EFCAB6Q5THR3 1501 aa12.98□□□□□ -0.33
SCARNA20.3-201ENST00000516913 ANKRD50Q9ULJ7 1429 aa12.96□□□□□ -0.33
SCARNA20.3-201ENST00000516913 PPARGC1BQ86YN6 1023 aaKnown RBP12.96□□□□□ -0.33
SCARNA20.3-201ENST00000516913 EID1Q9Y6B2 187 aa12.96□□□□□ -0.33
SCARNA20.3-201ENST00000516913 NUTM2DQ5VT03 806 aaPredicted RBP12.95□□□□□ -0.34
SCARNA20.3-201ENST00000516913 POTEAQ6S8J7 498 aa12.95□□□□□ -0.34
SCARNA20.3-201ENST00000516913 FAM135BQ49AJ0 1406 aa12.95□□□□□ -0.34
SCARNA20.3-201ENST00000516913 KANK1Q14678 1352 aa12.94□□□□□ -0.34
SCARNA20.3-201ENST00000516913 APLP2Q06481 763 aa12.94□□□□□ -0.34
SCARNA20.3-201ENST00000516913 PROSER2Q86WR7 435 aaPredicted RBP12.94□□□□□ -0.34
SCARNA20.3-201ENST00000516913 ADGRB3O60242 1522 aa12.93□□□□□ -0.34
SCARNA20.3-201ENST00000516913 SLC52A1Q9NWF4 448 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms