RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 ANO8Q9HCE9 1232 aaPredicted RBP1.28□□□□□ -2.2
RNU6-1049P-201ENST00000516414 ARHGAP33O14559 1287 aa1.27□□□□□ -2.21
RNU6-1049P-201ENST00000516414 TLL1O43897 1013 aa1.27□□□□□ -2.21
RNU6-1049P-201ENST00000516414 APLP1P51693 650 aa1.27□□□□□ -2.21
RNU6-1049P-201ENST00000516414 DOK7Q18PE1 504 aa1.27□□□□□ -2.21
RNU6-1049P-201ENST00000516414 PUS10Q3MIT2 529 aaKnown RBP1.27□□□□□ -2.21
RNU6-1049P-201ENST00000516414 C6orf132Q5T0Z8 1188 aa1.27□□□□□ -2.21
RNU6-1049P-201ENST00000516414 SAMD7Q7Z3H4 446 aa1.27□□□□□ -2.21
RNU6-1049P-201ENST00000516414 SYMPKQ92797 1274 aaKnown RBP1.27□□□□□ -2.21
RNU6-1049P-201ENST00000516414 REPIN1Q9BWE0 567 aaKnown RBP1.27□□□□□ -2.21
RNU6-1049P-201ENST00000516414 G3V3G9 751 aa1.26□□□□□ -2.21
RNU6-1049P-201ENST00000516414 SLC10A3P09131 477 aa1.26□□□□□ -2.21
RNU6-1049P-201ENST00000516414 COPS2P61201 443 aa1.26□□□□□ -2.21
RNU6-1049P-201ENST00000516414 MAP3K9P80192 1104 aa1.26□□□□□ -2.21
RNU6-1049P-201ENST00000516414 GUCA2AQ02747 115 aa1.26□□□□□ -2.21
RNU6-1049P-201ENST00000516414 TRIM67Q6ZTA4 783 aa1.26□□□□□ -2.21
RNU6-1049P-201ENST00000516414 NUDT18Q6ZVK8 323 aa1.26□□□□□ -2.21
RNU6-1049P-201ENST00000516414 KCNV2Q8TDN2 545 aa1.26□□□□□ -2.21
RNU6-1049P-201ENST00000516414 WNT2BQ93097 391 aa1.26□□□□□ -2.21
RNU6-1049P-201ENST00000516414 SNPHO15079 494 aa1.25□□□□□ -2.21
RNU6-1049P-201ENST00000516414 ST8SIA5O15466 376 aa1.25□□□□□ -2.21
RNU6-1049P-201ENST00000516414 ONECUT3O60422 494 aaPredicted RBP1.25□□□□□ -2.21
RNU6-1049P-201ENST00000516414 NBR1Q14596 966 aa1.25□□□□□ -2.21
RNU6-1049P-201ENST00000516414 MFSD10Q14728 455 aa1.25□□□□□ -2.21
RNU6-1049P-201ENST00000516414 SWT1Q5T5J6 900 aaKnown RBP1.25□□□□□ -2.21
RNU6-1049P-201ENST00000516414 PADI6Q6TGC4 694 aa1.25□□□□□ -2.21
RNU6-1049P-201ENST00000516414 THSD4Q6ZMP0 1018 aa1.25□□□□□ -2.21
RNU6-1049P-201ENST00000516414 LIAT1Q6ZQX7 453 aa1.25□□□□□ -2.21
RNU6-1049P-201ENST00000516414 ZDHHC16Q969W1 377 aa1.25□□□□□ -2.21
RNU6-1049P-201ENST00000516414 DDX27Q96GQ7 796 aaKnown RBP1.25□□□□□ -2.21
RNU6-1049P-201ENST00000516414 ZFRQ96KR1 1074 aaKnown RBP1.25□□□□□ -2.21
RNU6-1049P-201ENST00000516414 PRDM9Q9NQV7 894 aa1.25□□□□□ -2.21
RNU6-1049P-201ENST00000516414 RNF40O75150 1001 aa1.24□□□□□ -2.21
RNU6-1049P-201ENST00000516414 PDE4AP27815 886 aa1.24□□□□□ -2.21
RNU6-1049P-201ENST00000516414 VEGFBP49765 207 aa1.24□□□□□ -2.21
RNU6-1049P-201ENST00000516414 CAMK2BQ13554 666 aa1.24□□□□□ -2.21
RNU6-1049P-201ENST00000516414 TJAP1Q5JTD0 557 aa1.24□□□□□ -2.21
RNU6-1049P-201ENST00000516414 PPP1R18Q6NYC8 613 aa1.24□□□□□ -2.21
RNU6-1049P-201ENST00000516414 CDCA7LQ96GN5 454 aa1.24□□□□□ -2.21
RNU6-1049P-201ENST00000516414 BCL2L12Q9HB09 334 aa1.24□□□□□ -2.21
RNU6-1049P-201ENST00000516414 PCDH10Q9P2E7 1040 aa1.24□□□□□ -2.21
RNU6-1049P-201ENST00000516414 HPS5Q9UPZ3 1129 aa1.24□□□□□ -2.21
RNU6-1049P-201ENST00000516414 SOBPA7XYQ1 873 aa1.23□□□□□ -2.21
RNU6-1049P-201ENST00000516414 RBAK-RBAKDNI3L0D1 243 aa1.23□□□□□ -2.21
RNU6-1049P-201ENST00000516414 TNFRSF10AO00220 468 aa1.23□□□□□ -2.21
RNU6-1049P-201ENST00000516414 GPR37O15354 613 aa1.23□□□□□ -2.21
RNU6-1049P-201ENST00000516414 MAP3K7O43318 606 aa1.23□□□□□ -2.21
RNU6-1049P-201ENST00000516414 LCE2AQ5TA79 106 aaPredicted RBP1.23□□□□□ -2.21
RNU6-1049P-201ENST00000516414 PTCRAQ6ISU1 281 aaPredicted RBP1.23□□□□□ -2.21
RNU6-1049P-201ENST00000516414 BLOC1S3Q6QNY0 202 aa1.23□□□□□ -2.21
RNU6-1049P-201ENST00000516414 TATDN2Q93075 761 aa1.23□□□□□ -2.21
RNU6-1049P-201ENST00000516414 JPH4Q96JJ6 628 aa1.23□□□□□ -2.21
RNU6-1049P-201ENST00000516414 EYA1Q99502 592 aa1.23□□□□□ -2.21
RNU6-1049P-201ENST00000516414 MTRQ99707 1265 aa1.23□□□□□ -2.21
RNU6-1049P-201ENST00000516414 PNMA3Q9UL41 463 aa1.23□□□□□ -2.21
RNU6-1049P-201ENST00000516414 NUTM2FA1L443 756 aa1.22□□□□□ -2.21
RNU6-1049P-201ENST00000516414 TRIM6-TRIM34B2RNG4 842 aa1.22□□□□□ -2.21
RNU6-1049P-201ENST00000516414 S1PR4O95977 384 aa1.22□□□□□ -2.21
RNU6-1049P-201ENST00000516414 PTPREP23469 700 aa1.22□□□□□ -2.21
RNU6-1049P-201ENST00000516414 PPP4R3BQ5MIZ7 849 aa1.22□□□□□ -2.21
RNU6-1049P-201ENST00000516414 RNF19BQ6ZMZ0 732 aa1.22□□□□□ -2.21
RNU6-1049P-201ENST00000516414 MRPL50Q8N5N7 158 aaKnown RBP1.22□□□□□ -2.21
RNU6-1049P-201ENST00000516414 FAM160A2Q8N612 972 aaPredicted RBP1.22□□□□□ -2.21
RNU6-1049P-201ENST00000516414 SPRYD3Q8NCJ5 442 aa1.22□□□□□ -2.21
RNU6-1049P-201ENST00000516414 ZNF775Q96BV0 537 aaPredicted RBP1.22□□□□□ -2.21
RNU6-1049P-201ENST00000516414 PRKD2Q9BZL6 878 aa1.22□□□□□ -2.21
RNU6-1049P-201ENST00000516414 RCCD1A6NED2 376 aa1.21□□□□□ -2.22
RNU6-1049P-201ENST00000516414 SOWAHBA6NEL2 793 aa1.21□□□□□ -2.22
RNU6-1049P-201ENST00000516414 RNF223E7ERA6 249 aa1.21□□□□□ -2.22
RNU6-1049P-201ENST00000516414 J3QL48 77 aa1.21□□□□□ -2.22
RNU6-1049P-201ENST00000516414 RIMBP2O15034 1052 aa1.21□□□□□ -2.22
RNU6-1049P-201ENST00000516414 GFRA3O60609 400 aa1.21□□□□□ -2.22
RNU6-1049P-201ENST00000516414 NDUFV2P19404 249 aa1.21□□□□□ -2.22
RNU6-1049P-201ENST00000516414 PRSS12P56730 875 aa1.21□□□□□ -2.22
RNU6-1049P-201ENST00000516414 EN1Q05925 392 aaPredicted RBP1.21□□□□□ -2.22
RNU6-1049P-201ENST00000516414 FOXC1Q12948 553 aa1.21□□□□□ -2.22
RNU6-1049P-201ENST00000516414 E2F4Q16254 413 aa1.21□□□□□ -2.22
RNU6-1049P-201ENST00000516414 TYW1BQ6NUM6 668 aa1.21□□□□□ -2.22
RNU6-1049P-201ENST00000516414 BBXQ8WY36 941 aaPredicted RBP1.21□□□□□ -2.22
RNU6-1049P-201ENST00000516414 ZSWIM6Q9HCJ5 1215 aa1.21□□□□□ -2.22
RNU6-1049P-201ENST00000516414 A0A0G2JS52 829 aa1.2□□□□□ -2.22
RNU6-1049P-201ENST00000516414 PHF14O94880 888 aa1.2□□□□□ -2.22
RNU6-1049P-201ENST00000516414 PRKCSHP14314 528 aaPredicted RBP1.2□□□□□ -2.22
RNU6-1049P-201ENST00000516414 SNRPBP14678 240 aaKnown RBP1.2□□□□□ -2.22
RNU6-1049P-201ENST00000516414 HAP1P54257 671 aaPredicted RBP1.2□□□□□ -2.22
RNU6-1049P-201ENST00000516414 PTGDRQ13258 359 aa1.2□□□□□ -2.22
RNU6-1049P-201ENST00000516414 Q6ZNB5 142 aa1.2□□□□□ -2.22
RNU6-1049P-201ENST00000516414 TTC13Q8NBP0 860 aa1.2□□□□□ -2.22
RNU6-1049P-201ENST00000516414 GAS2L2Q8NHY3 880 aa1.2□□□□□ -2.22
RNU6-1049P-201ENST00000516414 DNAJC5Q9H3Z4 198 aa1.2□□□□□ -2.22
RNU6-1049P-201ENST00000516414 PKD2L1Q9P0L9 805 aa1.2□□□□□ -2.22
RNU6-1049P-201ENST00000516414 HCSTQ9UBK5 93 aa1.2□□□□□ -2.22
RNU6-1049P-201ENST00000516414 RABGEF1Q9UJ41 708 aa1.2□□□□□ -2.22
RNU6-1049P-201ENST00000516414 PCDHGC3Q9UN70 934 aa1.2□□□□□ -2.22
RNU6-1049P-201ENST00000516414 PCDHB15Q9Y5E8 787 aa1.2□□□□□ -2.22
RNU6-1049P-201ENST00000516414 ADGRG1Q9Y653 693 aa1.2□□□□□ -2.22
RNU6-1049P-201ENST00000516414 GOLGA8CPA6NN73 597 aa1.19□□□□□ -2.22
RNU6-1049P-201ENST00000516414 DDX11L8A8MPP1 907 aa1.19□□□□□ -2.22
RNU6-1049P-201ENST00000516414 PPP1R3GB7ZBB8 358 aa1.19□□□□□ -2.22
RNU6-1049P-201ENST00000516414 TK2O00142 265 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms