RNA–Protein interactions for RNA: ENST00000516211.1

SCARNA17.1-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 143 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17.1-201ENST00000516211 GZF1Q9H116 711 aaPredicted RBP4.37□□□□□ -1.71
SCARNA17.1-201ENST00000516211 GPCPD1Q9NPB8 672 aa4.37□□□□□ -1.71
SCARNA17.1-201ENST00000516211 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.37□□□□□ -1.71
SCARNA17.1-201ENST00000516211 ZNF330Q9Y3S2 320 aaPredicted RBP4.37□□□□□ -1.71
SCARNA17.1-201ENST00000516211 BAZ1AQ9NRL2 1556 aaPredicted RBP4.36□□□□□ -1.71
SCARNA17.1-201ENST00000516211 MS4A1P11836 297 aa4.36□□□□□ -1.71
SCARNA17.1-201ENST00000516211 MFAP1P55081 439 aaKnown RBP4.36□□□□□ -1.71
SCARNA17.1-201ENST00000516211 DIXDC1Q155Q3 683 aa4.36□□□□□ -1.71
SCARNA17.1-201ENST00000516211 PLPP6Q8IY26 295 aa4.36□□□□□ -1.71
SCARNA17.1-201ENST00000516211 RETREG2Q8NC44 543 aa4.36□□□□□ -1.71
SCARNA17.1-201ENST00000516211 BANK1Q8NDB2 785 aa4.36□□□□□ -1.71
SCARNA17.1-201ENST00000516211 MYT1LQ9UL68 1186 aa4.36□□□□□ -1.71
SCARNA17.1-201ENST00000516211 ARAP1Q96P48 1450 aa4.36□□□□□ -1.71
SCARNA17.1-201ENST00000516211 OSBPP22059 807 aa4.35□□□□□ -1.71
SCARNA17.1-201ENST00000516211 FNBP4Q8N3X1 1017 aaPredicted RBP4.35□□□□□ -1.71
SCARNA17.1-201ENST00000516211 PLSCR2Q9NRY7 297 aa4.35□□□□□ -1.71
SCARNA17.1-201ENST00000516211 ZRANB1Q9UGI0 708 aa4.35□□□□□ -1.71
SCARNA17.1-201ENST00000516211 E9PSI1 815 aa4.34□□□□□ -1.71
SCARNA17.1-201ENST00000516211 HMGB1P09429 215 aaKnown RBP4.34□□□□□ -1.71
SCARNA17.1-201ENST00000516211 PTGER2P43116 358 aa4.34□□□□□ -1.71
SCARNA17.1-201ENST00000516211 RBM25P49756 843 aaKnown RBP4.34□□□□□ -1.71
SCARNA17.1-201ENST00000516211 PTGDRQ13258 359 aa4.34□□□□□ -1.71
SCARNA17.1-201ENST00000516211 TMEM259Q4ZIN3 620 aa4.34□□□□□ -1.71
SCARNA17.1-201ENST00000516211 RGS22Q8NE09 1264 aa4.34□□□□□ -1.71
SCARNA17.1-201ENST00000516211 CALR3Q96L12 384 aaKnown RBP4.34□□□□□ -1.71
SCARNA17.1-201ENST00000516211 MTMR7Q9Y216 660 aa4.34□□□□□ -1.71
SCARNA17.1-201ENST00000516211 SHROOM4Q9ULL8 1493 aa4.34□□□□□ -1.71
SCARNA17.1-201ENST00000516211 SMARCA2P51531 1590 aa4.34□□□□□ -1.71
SCARNA17.1-201ENST00000516211 FECHP22830 423 aa4.33□□□□□ -1.72
SCARNA17.1-201ENST00000516211 SSTR3P32745 418 aaPredicted RBP4.33□□□□□ -1.72
SCARNA17.1-201ENST00000516211 MDM2Q00987 491 aaPredicted RBP4.33□□□□□ -1.72
SCARNA17.1-201ENST00000516211 KCNA1Q09470 495 aa4.33□□□□□ -1.72
SCARNA17.1-201ENST00000516211 MICALL2Q8IY33 904 aa4.33□□□□□ -1.72
SCARNA17.1-201ENST00000516211 DDX12PQ92771 950 aa4.33□□□□□ -1.72
SCARNA17.1-201ENST00000516211 POM121Q96HA1 1249 aa4.33□□□□□ -1.72
SCARNA17.1-201ENST00000516211 BEGAINQ9BUH8 593 aa4.33□□□□□ -1.72
SCARNA17.1-201ENST00000516211 COG6Q9Y2V7 657 aa4.33□□□□□ -1.72
SCARNA17.1-201ENST00000516211 CSB-PGBD3P0DP91 1061 aa4.32□□□□□ -1.72
SCARNA17.1-201ENST00000516211 CLK2P49760 499 aaKnown RBP4.32□□□□□ -1.72
SCARNA17.1-201ENST00000516211 UPF1Q92900 1129 aaKnown RBP eCLIP4.32□□□□□ -1.72
SCARNA17.1-201ENST00000516211 POLR3EQ9NVU0 708 aa4.32□□□□□ -1.72
SCARNA17.1-201ENST00000516211 TIE1P35590 1138 aa4.31□□□□□ -1.72
SCARNA17.1-201ENST00000516211 USTQ9Y2C2 406 aa4.31□□□□□ -1.72
SCARNA17.1-201ENST00000516211 HECW2Q9P2P5 1572 aa4.31□□□□□ -1.72
SCARNA17.1-201ENST00000516211 BRD1O95696 1058 aa4.3□□□□□ -1.72
SCARNA17.1-201ENST00000516211 OATP04181 439 aa4.3□□□□□ -1.72
SCARNA17.1-201ENST00000516211 CD44P16070 742 aaKnown RBP4.3□□□□□ -1.72
SCARNA17.1-201ENST00000516211 RFC5P40937 340 aa4.3□□□□□ -1.72
SCARNA17.1-201ENST00000516211 OXER1Q8TDS5 423 aa4.3□□□□□ -1.72
SCARNA17.1-201ENST00000516211 PHF12Q96QT6 1004 aa4.3□□□□□ -1.72
SCARNA17.1-201ENST00000516211 C2orf72A6NCS6 295 aa4.29□□□□□ -1.72
SCARNA17.1-201ENST00000516211 EVI5O60447 810 aa4.29□□□□□ -1.72
SCARNA17.1-201ENST00000516211 IRF5Q13568 498 aa4.29□□□□□ -1.72
SCARNA17.1-201ENST00000516211 FOXD4L5Q5VV16 416 aaPredicted RBP4.29□□□□□ -1.72
SCARNA17.1-201ENST00000516211 PROCA1Q8NCQ7 364 aaPredicted RBP4.29□□□□□ -1.72
SCARNA17.1-201ENST00000516211 FOXD4L4Q8WXT5 416 aaPredicted RBP4.29□□□□□ -1.72
SCARNA17.1-201ENST00000516211 PBXIP1Q96AQ6 731 aa4.29□□□□□ -1.72
SCARNA17.1-201ENST00000516211 EPAS1Q99814 870 aa4.29□□□□□ -1.72
SCARNA17.1-201ENST00000516211 TMUB1Q9BVT8 246 aa4.29□□□□□ -1.72
SCARNA17.1-201ENST00000516211 REPIN1Q9BWE0 567 aaKnown RBP4.29□□□□□ -1.72
SCARNA17.1-201ENST00000516211 MAP3K7O43318 606 aa4.28□□□□□ -1.72
SCARNA17.1-201ENST00000516211 ABL2P42684 1182 aa4.28□□□□□ -1.72
SCARNA17.1-201ENST00000516211 FXR2P51116 673 aaKnown RBP eCLIP4.28□□□□□ -1.72
SCARNA17.1-201ENST00000516211 CCDC27Q2M243 656 aa4.28□□□□□ -1.72
SCARNA17.1-201ENST00000516211 MYSM1Q5VVJ2 828 aa4.28□□□□□ -1.72
SCARNA17.1-201ENST00000516211 GLMNQ92990 594 aa4.28□□□□□ -1.72
SCARNA17.1-201ENST00000516211 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.28□□□□□ -1.72
SCARNA17.1-201ENST00000516211 FAM217BQ9NTX9 383 aaPredicted RBP4.28□□□□□ -1.72
SCARNA17.1-201ENST00000516211 AMOTL2Q9Y2J4 779 aa4.28□□□□□ -1.72
SCARNA17.1-201ENST00000516211 BOLA1Q9Y3E2 137 aa4.28□□□□□ -1.72
SCARNA17.1-201ENST00000516211 SYNJ2O15056 1496 aa4.27□□□□□ -1.73
SCARNA17.1-201ENST00000516211 EN1Q05925 392 aaPredicted RBP4.27□□□□□ -1.73
SCARNA17.1-201ENST00000516211 B4GALNT3Q6L9W6 998 aa4.27□□□□□ -1.73
SCARNA17.1-201ENST00000516211 POTEDQ86YR6 584 aa4.27□□□□□ -1.73
SCARNA17.1-201ENST00000516211 GDPD2Q9HCC8 539 aa4.27□□□□□ -1.73
SCARNA17.1-201ENST00000516211 SNRKQ9NRH2 765 aa4.27□□□□□ -1.73
SCARNA17.1-201ENST00000516211 TTLL13PA6NNM8 815 aa4.26□□□□□ -1.73
SCARNA17.1-201ENST00000516211 WASHC4Q2M389 1173 aa4.26□□□□□ -1.73
SCARNA17.1-201ENST00000516211 PPP2R2DQ66LE6 453 aa4.26□□□□□ -1.73
SCARNA17.1-201ENST00000516211 CERKQ8TCT0 537 aa4.26□□□□□ -1.73
SCARNA17.1-201ENST00000516211 MS4A3Q96HJ5 214 aa4.26□□□□□ -1.73
SCARNA17.1-201ENST00000516211 TBC1D2Q9BYX2 928 aa4.26□□□□□ -1.73
SCARNA17.1-201ENST00000516211 KIF3CO14782 793 aa4.25□□□□□ -1.73
SCARNA17.1-201ENST00000516211 PHF14O94880 888 aa4.25□□□□□ -1.73
SCARNA17.1-201ENST00000516211 NUTM1Q86Y26 1132 aa4.25□□□□□ -1.73
SCARNA17.1-201ENST00000516211 L3MBTL3Q96JM7 780 aaPredicted RBP4.25□□□□□ -1.73
SCARNA17.1-201ENST00000516211 TRIM35Q9UPQ4 493 aa4.25□□□□□ -1.73
SCARNA17.1-201ENST00000516211 KIF21AQ7Z4S6 1674 aa4.25□□□□□ -1.73
SCARNA17.1-201ENST00000516211 SCRIBQ14160 1630 aa4.24□□□□□ -1.73
SCARNA17.1-201ENST00000516211 TUSC1Q2TAM9 212 aa4.24□□□□□ -1.73
SCARNA17.1-201ENST00000516211 DPY19L2Q6NUT2 758 aa4.24□□□□□ -1.73
SCARNA17.1-201ENST00000516211 RIC3Q7Z5B4 369 aa4.24□□□□□ -1.73
SCARNA17.1-201ENST00000516211 METTL3Q86U44 580 aaKnown RBP4.24□□□□□ -1.73
SCARNA17.1-201ENST00000516211 NDUFB9Q9Y6M9 179 aa4.24□□□□□ -1.73
SCARNA17.1-201ENST00000516211 ERCC6L2Q5T890 1561 aa4.23□□□□□ -1.73
SCARNA17.1-201ENST00000516211 TYW1BQ6NUM6 668 aa4.23□□□□□ -1.73
SCARNA17.1-201ENST00000516211 SND1Q7KZF4 910 aaKnown RBP eCLIP4.23□□□□□ -1.73
SCARNA17.1-201ENST00000516211 SULF1Q8IWU6 871 aa4.23□□□□□ -1.73
SCARNA17.1-201ENST00000516211 MTMR14Q8NCE2 650 aa4.23□□□□□ -1.73
SCARNA17.1-201ENST00000516211 SLAIN1Q8ND83 568 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms