RNA–Protein interactions for RNA: ENST00000515621.5

NR1I3-234, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-234ENST00000515621 EIF2AK4Q9P2K8 1649 aaKnown RBP13.32□□□□□ -0.28
NR1I3-234ENST00000515621 TIMELESSQ9UNS1 1208 aa13.32□□□□□ -0.28
NR1I3-234ENST00000515621 UNC13BO14795 1591 aa13.32□□□□□ -0.28
NR1I3-234ENST00000515621 HECW2Q9P2P5 1572 aa13.32□□□□□ -0.28
NR1I3-234ENST00000515621 ZMYM4Q5VZL5 1548 aa13.31□□□□□ -0.28
NR1I3-234ENST00000515621 FAM69CQ0P6D2 419 aa13.3□□□□□ -0.28
NR1I3-234ENST00000515621 PPRC1Q5VV67 1664 aaKnown RBP13.29□□□□□ -0.28
NR1I3-234ENST00000515621 DNAJC5Q9H3Z4 198 aa13.29□□□□□ -0.28
NR1I3-234ENST00000515621 KIF13AQ9H1H9 1805 aa13.28□□□□□ -0.28
NR1I3-234ENST00000515621 PZPP20742 1482 aa13.28□□□□□ -0.28
NR1I3-234ENST00000515621 BCORL1Q5H9F3 1711 aa13.27□□□□□ -0.28
NR1I3-234ENST00000515621 RICTORQ6R327 1708 aa13.27□□□□□ -0.28
NR1I3-234ENST00000515621 AFAP1Q8N556 730 aa13.27□□□□□ -0.29
NR1I3-234ENST00000515621 DHX29Q7Z478 1369 aaKnown RBP13.27□□□□□ -0.29
NR1I3-234ENST00000515621 DEPDC5O75140 1603 aa13.27□□□□□ -0.29
NR1I3-234ENST00000515621 KIDINS220Q9ULH0 1771 aa13.27□□□□□ -0.29
NR1I3-234ENST00000515621 IQGAP3Q86VI3 1631 aa13.25□□□□□ -0.29
NR1I3-234ENST00000515621 DCAF8L1A6NGE4 600 aa13.25□□□□□ -0.29
NR1I3-234ENST00000515621 MPHOSPH9Q99550 1183 aa13.25□□□□□ -0.29
NR1I3-234ENST00000515621 FRMPD1Q5SYB0 1578 aa13.24□□□□□ -0.29
NR1I3-234ENST00000515621 ATXN8OSP0DMR3 200 aa13.24□□□□□ -0.29
NR1I3-234ENST00000515621 TRIM52Q96A61 297 aa13.24□□□□□ -0.29
NR1I3-234ENST00000515621 REREQ9P2R6 1566 aa13.24□□□□□ -0.29
NR1I3-234ENST00000515621 PRDM15P57071 1507 aaPredicted RBP13.23□□□□□ -0.29
NR1I3-234ENST00000515621 VWDEQ8N2E2 1590 aa13.23□□□□□ -0.29
NR1I3-234ENST00000515621 FAM135AQ9P2D6 1515 aa13.23□□□□□ -0.29
NR1I3-234ENST00000515621 A2MP01023 1474 aa13.23□□□□□ -0.29
NR1I3-234ENST00000515621 NUP155O75694 1391 aa13.22□□□□□ -0.29
NR1I3-234ENST00000515621 RNF17Q9BXT8 1623 aaKnown RBP13.22□□□□□ -0.29
NR1I3-234ENST00000515621 ANKRD30BQ9BXX2 1392 aa13.2□□□□□ -0.3
NR1I3-234ENST00000515621 DIP2CQ9Y2E4 1556 aa13.2□□□□□ -0.3
NR1I3-234ENST00000515621 ATP10AO60312 1499 aa13.2□□□□□ -0.3
NR1I3-234ENST00000515621 ABCA6Q8N139 1617 aa13.2□□□□□ -0.3
NR1I3-234ENST00000515621 LMTK2Q8IWU2 1503 aa13.19□□□□□ -0.3
NR1I3-234ENST00000515621 KANK1Q14678 1352 aa13.19□□□□□ -0.3
NR1I3-234ENST00000515621 RPRD2Q5VT52 1461 aaKnown RBP13.18□□□□□ -0.3
NR1I3-234ENST00000515621 AGLP35573 1532 aa13.17□□□□□ -0.3
NR1I3-234ENST00000515621 MROH1Q8NDA8 1641 aa13.17□□□□□ -0.3
NR1I3-234ENST00000515621 TET3O43151 1660 aa13.16□□□□□ -0.3
NR1I3-234ENST00000515621 ARHGEF40Q8TER5 1519 aa13.16□□□□□ -0.3
NR1I3-234ENST00000515621 RAPGEF3O95398 923 aa13.14□□□□□ -0.31
NR1I3-234ENST00000515621 PKD2Q13563 968 aa13.14□□□□□ -0.31
NR1I3-234ENST00000515621 ZC3H13Q5T200 1668 aaKnown RBP13.14□□□□□ -0.31
NR1I3-234ENST00000515621 TSPOAP1O95153 1857 aa13.14□□□□□ -0.31
NR1I3-234ENST00000515621 TONSLQ96HA7 1378 aa13.13□□□□□ -0.31
NR1I3-234ENST00000515621 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.13□□□□□ -0.31
NR1I3-234ENST00000515621 MYT1LQ9UL68 1186 aa13.12□□□□□ -0.31
NR1I3-234ENST00000515621 EFCAB6Q5THR3 1501 aa13.12□□□□□ -0.31
NR1I3-234ENST00000515621 NEURL4Q96JN8 1562 aa13.11□□□□□ -0.31
NR1I3-234ENST00000515621 YEATS2Q9ULM3 1422 aa13.11□□□□□ -0.31
NR1I3-234ENST00000515621 KIF3BO15066 747 aa13.1□□□□□ -0.31
NR1I3-234ENST00000515621 PTPRTO14522 1441 aa13.1□□□□□ -0.31
NR1I3-234ENST00000515621 TRPM2O94759 1503 aa13.09□□□□□ -0.31
NR1I3-234ENST00000515621 ARHGAP31Q2M1Z3 1444 aa13.09□□□□□ -0.31
NR1I3-234ENST00000515621 COL17A1Q9UMD9 1497 aaPredicted RBP13.09□□□□□ -0.31
NR1I3-234ENST00000515621 SIN3AQ96ST3 1273 aa13.08□□□□□ -0.32
NR1I3-234ENST00000515621 CCDC144AA2RUR9 1427 aa13.07□□□□□ -0.32
NR1I3-234ENST00000515621 E9PCH4 1651 aa13.07□□□□□ -0.32
NR1I3-234ENST00000515621 ABCC3O15438 1527 aa13.07□□□□□ -0.32
NR1I3-234ENST00000515621 PLA2R1Q13018 1463 aa13.06□□□□□ -0.32
NR1I3-234ENST00000515621 PPP1R15AO75807 674 aaPredicted RBP13.06□□□□□ -0.32
NR1I3-234ENST00000515621 NEUROD1Q13562 356 aa13.05□□□□□ -0.32
NR1I3-234ENST00000515621 STAC3Q96MF2 364 aa13.04□□□□□ -0.32
NR1I3-234ENST00000515621 SPHKAPQ2M3C7 1700 aa13.04□□□□□ -0.32
NR1I3-234ENST00000515621 CNTLNQ9NXG0 1405 aa13.04□□□□□ -0.32
NR1I3-234ENST00000515621 CAMSAP1Q5T5Y3 1602 aa13.02□□□□□ -0.32
NR1I3-234ENST00000515621 UHRF1BP1Q6BDS2 1440 aa13.02□□□□□ -0.33
NR1I3-234ENST00000515621 CEP152O94986 1710 aa13.01□□□□□ -0.33
NR1I3-234ENST00000515621 NPATQ14207 1427 aa13□□□□□ -0.33
NR1I3-234ENST00000515621 TRHP20396 242 aaPredicted RBP13□□□□□ -0.33
NR1I3-234ENST00000515621 NOS1P29475 1434 aa12.99□□□□□ -0.33
NR1I3-234ENST00000515621 WASHC2CQ9Y4E1 1318 aa12.99□□□□□ -0.33
NR1I3-234ENST00000515621 SPATA31E1Q6ZUB1 1445 aa12.98□□□□□ -0.33
NR1I3-234ENST00000515621 L3MBTL2Q969R5 705 aa12.98□□□□□ -0.33
NR1I3-234ENST00000515621 GGT6Q6P531 493 aa12.97□□□□□ -0.33
NR1I3-234ENST00000515621 SAMD1Q6SPF0 538 aaPredicted RBP12.97□□□□□ -0.33
NR1I3-234ENST00000515621 CLTCL1P53675 1640 aa12.96□□□□□ -0.33
NR1I3-234ENST00000515621 ZNF316A6NFI3 1004 aaPredicted RBP12.96□□□□□ -0.33
NR1I3-234ENST00000515621 PIK3C2BO00750 1634 aa12.95□□□□□ -0.34
NR1I3-234ENST00000515621 ADGRB3O60242 1522 aa12.94□□□□□ -0.34
NR1I3-234ENST00000515621 MROH2AA6NES4 1674 aa12.94□□□□□ -0.34
NR1I3-234ENST00000515621 RALGAPBQ86X10 1494 aa12.94□□□□□ -0.34
NR1I3-234ENST00000515621 SIGLEC1Q9BZZ2 1709 aa12.93□□□□□ -0.34
NR1I3-234ENST00000515621 MYOM2P54296 1465 aa12.92□□□□□ -0.34
NR1I3-234ENST00000515621 SPATA31D1Q6ZQQ2 1576 aa12.92□□□□□ -0.34
NR1I3-234ENST00000515621 SLC52A1Q9NWF4 448 aa12.92□□□□□ -0.34
NR1I3-234ENST00000515621 PRAG1Q86YV5 1406 aa12.91□□□□□ -0.34
NR1I3-234ENST00000515621 FKBP8Q14318 412 aa12.91□□□□□ -0.34
NR1I3-234ENST00000515621 PREX1Q8TCU6 1659 aa12.91□□□□□ -0.34
NR1I3-234ENST00000515621 LAMC1P11047 1609 aa12.91□□□□□ -0.34
NR1I3-234ENST00000515621 ERVK-7P63135 1459 aa12.91□□□□□ -0.34
NR1I3-234ENST00000515621 SYNMO15061 1565 aa12.9□□□□□ -0.34
NR1I3-234ENST00000515621 KIF1BO60333 1816 aa12.9□□□□□ -0.34
NR1I3-234ENST00000515621 RPGRIP1LQ68CZ1 1315 aa12.89□□□□□ -0.35
NR1I3-234ENST00000515621 U3KPZ7 1027 aaPredicted RBP12.89□□□□□ -0.35
NR1I3-234ENST00000515621 GPRASP1Q5JY77 1395 aa12.89□□□□□ -0.35
NR1I3-234ENST00000515621 CLTCQ00610 1675 aaKnown RBP12.89□□□□□ -0.35
NR1I3-234ENST00000515621 NRXN1Q9ULB1 1477 aa12.87□□□□□ -0.35
NR1I3-234ENST00000515621 KIAA1210Q9ULL0 1709 aa12.87□□□□□ -0.35
NR1I3-234ENST00000515621 KDM5AP29375 1690 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms