RNA–Protein interactions for RNA: ENST00000515442.1

RUFY3-214, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 3

Gene RUFY3, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-214ENST00000515442 TTLL12Q14166 644 aaPredicted RBP9.14□□□□□ -0.95
RUFY3-214ENST00000515442 TSR1Q2NL82 804 aaKnown RBP9.14□□□□□ -0.95
RUFY3-214ENST00000515442 ZSWIM6Q9HCJ5 1215 aa9.14□□□□□ -0.95
RUFY3-214ENST00000515442 NPDC1Q9NQX5 325 aaPredicted RBP9.14□□□□□ -0.95
RUFY3-214ENST00000515442 NUDT7P0C024 238 aa9.13□□□□□ -0.95
RUFY3-214ENST00000515442 POTEJP0CG39 1038 aa9.13□□□□□ -0.95
RUFY3-214ENST00000515442 ARSIQ5FYB1 569 aa9.13□□□□□ -0.95
RUFY3-214ENST00000515442 PARP9Q8IXQ6 854 aa9.13□□□□□ -0.95
RUFY3-214ENST00000515442 ZNF710Q8N1W2 664 aa9.13□□□□□ -0.95
RUFY3-214ENST00000515442 ZNF454Q8N9F8 522 aa9.13□□□□□ -0.95
RUFY3-214ENST00000515442 CERKQ8TCT0 537 aa9.13□□□□□ -0.95
RUFY3-214ENST00000515442 DDRGK1Q96HY6 314 aa9.13□□□□□ -0.95
RUFY3-214ENST00000515442 ARXQ96QS3 562 aa9.13□□□□□ -0.95
RUFY3-214ENST00000515442 HOXB3P14651 431 aaPredicted RBP9.12□□□□□ -0.95
RUFY3-214ENST00000515442 ZDHHC16Q969W1 377 aa9.12□□□□□ -0.95
RUFY3-214ENST00000515442 FAM117AQ9C073 453 aa9.11□□□□□ -0.95
RUFY3-214ENST00000515442 POTEB2H3BUK9 544 aa9.1□□□□□ -0.95
RUFY3-214ENST00000515442 C6orf132Q5T0Z8 1188 aa9.1□□□□□ -0.95
RUFY3-214ENST00000515442 KHSRPQ92945 711 aaKnown RBP eCLIP9.1□□□□□ -0.95
RUFY3-214ENST00000515442 GPR153Q6NV75 609 aa9.08□□□□□ -0.96
RUFY3-214ENST00000515442 CLCN1P35523 988 aa9.07□□□□□ -0.96
RUFY3-214ENST00000515442 GIGYF2Q6Y7W6 1299 aaKnown RBP9.07□□□□□ -0.96
RUFY3-214ENST00000515442 PSDA5PKW4 1024 aaPredicted RBP9.06□□□□□ -0.96
RUFY3-214ENST00000515442 SNPHO15079 494 aa9.06□□□□□ -0.96
RUFY3-214ENST00000515442 OATP04181 439 aa9.06□□□□□ -0.96
RUFY3-214ENST00000515442 PPP4R3BQ5MIZ7 849 aa9.05□□□□□ -0.96
RUFY3-214ENST00000515442 PADI6Q6TGC4 694 aa9.05□□□□□ -0.96
RUFY3-214ENST00000515442 ADAM33Q9BZ11 813 aa9.05□□□□□ -0.96
RUFY3-214ENST00000515442 RBM27Q9P2N5 1060 aaKnown RBP9.05□□□□□ -0.96
RUFY3-214ENST00000515442 PLEKHG3A1L390 1219 aa9.04□□□□□ -0.96
RUFY3-214ENST00000515442 MDM2Q00987 491 aaPredicted RBP9.04□□□□□ -0.96
RUFY3-214ENST00000515442 GPCPD1Q9NPB8 672 aa9.04□□□□□ -0.96
RUFY3-214ENST00000515442 LHX6Q9UPM6 363 aa9.04□□□□□ -0.96
RUFY3-214ENST00000515442 PRSS12P56730 875 aa9.02□□□□□ -0.97
RUFY3-214ENST00000515442 MS4A1P11836 297 aa9.01□□□□□ -0.97
RUFY3-214ENST00000515442 FAM161AQ3B820 660 aa9.01□□□□□ -0.97
RUFY3-214ENST00000515442 METTL3Q86U44 580 aaKnown RBP9.01□□□□□ -0.97
RUFY3-214ENST00000515442 TTC13Q8NBP0 860 aa9.01□□□□□ -0.97
RUFY3-214ENST00000515442 CDCA7LQ96GN5 454 aa9.01□□□□□ -0.97
RUFY3-214ENST00000515442 REPIN1Q9BWE0 567 aaKnown RBP9.01□□□□□ -0.97
RUFY3-214ENST00000515442 ADGRG1Q9Y653 693 aa9.01□□□□□ -0.97
RUFY3-214ENST00000515442 PHOX2BQ99453 314 aa9□□□□□ -0.97
RUFY3-214ENST00000515442 TMUB1Q9BVT8 246 aa9□□□□□ -0.97
RUFY3-214ENST00000515442 SSTR3P32745 418 aaPredicted RBP8.99□□□□□ -0.97
RUFY3-214ENST00000515442 RBM46Q8TBY0 533 aaKnown RBP8.99□□□□□ -0.97
RUFY3-214ENST00000515442 PXYLP1Q8TE99 480 aa8.99□□□□□ -0.97
RUFY3-214ENST00000515442 BCL2L12Q9HB09 334 aa8.99□□□□□ -0.97
RUFY3-214ENST00000515442 GOPCQ9HD26 462 aa8.99□□□□□ -0.97
RUFY3-214ENST00000515442 PTPREP23469 700 aa8.98□□□□□ -0.97
RUFY3-214ENST00000515442 HOXB1P14653 301 aaPredicted RBP8.97□□□□□ -0.97
RUFY3-214ENST00000515442 PPP1R3GB7ZBB8 358 aa8.96□□□□□ -0.98
RUFY3-214ENST00000515442 PCMTD1Q96MG8 357 aaPredicted RBP8.96□□□□□ -0.98
RUFY3-214ENST00000515442 RSPH6AQ9H0K4 717 aa8.96□□□□□ -0.98
RUFY3-214ENST00000515442 FAM217BQ9NTX9 383 aaPredicted RBP8.96□□□□□ -0.98
RUFY3-214ENST00000515442 COL9A1P20849 921 aa8.95□□□□□ -0.98
RUFY3-214ENST00000515442 NLRP7Q8WX94 980 aa8.95□□□□□ -0.98
RUFY3-214ENST00000515442 KCNH8Q96L42 1107 aa8.95□□□□□ -0.98
RUFY3-214ENST00000515442 BEGAINQ9BUH8 593 aa8.94□□□□□ -0.98
RUFY3-214ENST00000515442 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.93□□□□□ -0.98
RUFY3-214ENST00000515442 SH3D19Q5HYK7 790 aa8.93□□□□□ -0.98
RUFY3-214ENST00000515442 NBPF26B4DH59 902 aa8.92□□□□□ -0.98
RUFY3-214ENST00000515442 PACS2Q86VP3 889 aa8.92□□□□□ -0.98
RUFY3-214ENST00000515442 ATP1B4Q9UN42 357 aaPredicted RBP8.92□□□□□ -0.98
RUFY3-214ENST00000515442 FAM198AQ9UFP1 575 aa8.91□□□□□ -0.98
RUFY3-214ENST00000515442 TSKSQ9UJT2 592 aa8.91□□□□□ -0.98
RUFY3-214ENST00000515442 RCCD1A6NED2 376 aa8.9□□□□□ -0.98
RUFY3-214ENST00000515442 TRIM6-TRIM34B2RNG4 842 aa8.9□□□□□ -0.98
RUFY3-214ENST00000515442 SKIV2LQ15477 1246 aaKnown RBP8.9□□□□□ -0.98
RUFY3-214ENST00000515442 NUDT18Q6ZVK8 323 aa8.9□□□□□ -0.98
RUFY3-214ENST00000515442 KCNK17Q96T54 332 aa8.9□□□□□ -0.98
RUFY3-214ENST00000515442 EYA1Q99502 592 aa8.9□□□□□ -0.98
RUFY3-214ENST00000515442 FLIIQ13045 1269 aa8.89□□□□□ -0.99
RUFY3-214ENST00000515442 OTUD5Q96G74 571 aa8.89□□□□□ -0.99
RUFY3-214ENST00000515442 PNMA3Q9UL41 463 aa8.89□□□□□ -0.99
RUFY3-214ENST00000515442 DNAJB2P25686 324 aa8.88□□□□□ -0.99
RUFY3-214ENST00000515442 DIXDC1Q155Q3 683 aa8.88□□□□□ -0.99
RUFY3-214ENST00000515442 TATDN2Q93075 761 aa8.88□□□□□ -0.99
RUFY3-214ENST00000515442 ONECUT3O60422 494 aaPredicted RBP8.87□□□□□ -0.99
RUFY3-214ENST00000515442 SULF1Q8IWU6 871 aa8.87□□□□□ -0.99
RUFY3-214ENST00000515442 ZMYND15Q9H091 742 aa8.87□□□□□ -0.99
RUFY3-214ENST00000515442 HOMEZQ8IX15 550 aa8.86□□□□□ -0.99
RUFY3-214ENST00000515442 POLR3EQ9NVU0 708 aa8.86□□□□□ -0.99
RUFY3-214ENST00000515442 SUPT5HO00267 1087 aaKnown RBP8.85□□□□□ -0.99
RUFY3-214ENST00000515442 ERBB3P21860 1342 aa8.84□□□□□ -0.99
RUFY3-214ENST00000515442 PROX2Q3B8N5 592 aa8.84□□□□□ -0.99
RUFY3-214ENST00000515442 MYSM1Q5VVJ2 828 aa8.84□□□□□ -0.99
RUFY3-214ENST00000515442 TBC1D2Q9BYX2 928 aa8.84□□□□□ -0.99
RUFY3-214ENST00000515442 DDX11L8A8MPP1 907 aa8.83□□□□□ -1
RUFY3-214ENST00000515442 TMEM134Q9H6X4 195 aa8.83□□□□□ -1
RUFY3-214ENST00000515442 C3orf80F5H4A9 247 aa8.82□□□□□ -1
RUFY3-214ENST00000515442 SMAPO00193 183 aa8.82□□□□□ -1
RUFY3-214ENST00000515442 CLK2P49760 499 aaKnown RBP8.82□□□□□ -1
RUFY3-214ENST00000515442 VARS2Q5ST30 1063 aaKnown RBP8.82□□□□□ -1
RUFY3-214ENST00000515442 LHX8Q68G74 356 aa8.82□□□□□ -1
RUFY3-214ENST00000515442 NUTM1Q86Y26 1132 aa8.82□□□□□ -1
RUFY3-214ENST00000515442 PROCA1Q8NCQ7 364 aaPredicted RBP8.82□□□□□ -1
RUFY3-214ENST00000515442 ZBED2Q9BTP6 218 aa8.82□□□□□ -1
RUFY3-214ENST00000515442 KIAA1468Q9P260 1216 aa8.82□□□□□ -1
RUFY3-214ENST00000515442 ARHGAP33O14559 1287 aa8.81□□□□□ -1
RUFY3-214ENST00000515442 CD46P15529 392 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms