RNA–Protein interactions for RNA: ENST00000515421.1

CDV3-209, Transcript of CDV3 homolog, humanhuman

TSL 3 BASIC

Gene CDV3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDV3-209ENST00000515421 PLEKHD1A6NEE1 506 aa13.22□□□□□ -0.29
CDV3-209ENST00000515421 SMYD5Q6GMV2 418 aa13.22□□□□□ -0.29
CDV3-209ENST00000515421 E2F4Q16254 413 aa13.21□□□□□ -0.29
CDV3-209ENST00000515421 AK7Q96M32 723 aa13.21□□□□□ -0.29
CDV3-209ENST00000515421 ABCA9Q8IUA7 1624 aa13.21□□□□□ -0.3
CDV3-209ENST00000515421 RAPGEF6Q8TEU7 1601 aa13.2□□□□□ -0.3
CDV3-209ENST00000515421 ILDR1Q86SU0 546 aaPredicted RBP13.19□□□□□ -0.3
CDV3-209ENST00000515421 APBB1O00213 710 aa13.18□□□□□ -0.3
CDV3-209ENST00000515421 HECW2Q9P2P5 1572 aa13.18□□□□□ -0.3
CDV3-209ENST00000515421 NUP153P49790 1475 aaKnown RBP13.18□□□□□ -0.3
CDV3-209ENST00000515421 RAPGEF3O95398 923 aa13.17□□□□□ -0.3
CDV3-209ENST00000515421 KDM4CQ9H3R0 1056 aa13.17□□□□□ -0.3
CDV3-209ENST00000515421 FHOD3Q2V2M9 1422 aa13.15□□□□□ -0.3
CDV3-209ENST00000515421 EFCAB5A4FU69 1503 aa13.15□□□□□ -0.31
CDV3-209ENST00000515421 ARID4BQ4LE39 1312 aaPredicted RBP13.14□□□□□ -0.31
CDV3-209ENST00000515421 MKRN3Q13064 507 aaKnown RBP13.13□□□□□ -0.31
CDV3-209ENST00000515421 NECTIN2Q92692 538 aa13.13□□□□□ -0.31
CDV3-209ENST00000515421 DENND4BO75064 1496 aaPredicted RBP13.13□□□□□ -0.31
CDV3-209ENST00000515421 KIF21BO75037 1637 aa13.12□□□□□ -0.31
CDV3-209ENST00000515421 AKNAQ7Z591 1439 aa13.11□□□□□ -0.31
CDV3-209ENST00000515421 PTPRMP28827 1452 aa13.11□□□□□ -0.31
CDV3-209ENST00000515421 CDK11AQ9UQ88 783 aaPredicted RBP13.11□□□□□ -0.31
CDV3-209ENST00000515421 FANCAO15360 1455 aa13.1□□□□□ -0.31
CDV3-209ENST00000515421 POGZQ7Z3K3 1410 aa13.1□□□□□ -0.31
CDV3-209ENST00000515421 DSG3P32926 999 aa13.09□□□□□ -0.31
CDV3-209ENST00000515421 CFAP74Q9C0B2 1584 aa13.08□□□□□ -0.32
CDV3-209ENST00000515421 FMN1Q68DA7 1419 aa13.08□□□□□ -0.32
CDV3-209ENST00000515421 FLIIQ13045 1269 aa13.08□□□□□ -0.32
CDV3-209ENST00000515421 MAGI2Q86UL8 1455 aa13.08□□□□□ -0.32
CDV3-209ENST00000515421 ADAMTSL3P82987 1691 aa13.07□□□□□ -0.32
CDV3-209ENST00000515421 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.06□□□□□ -0.32
CDV3-209ENST00000515421 FRMPD1Q5SYB0 1578 aa13.06□□□□□ -0.32
CDV3-209ENST00000515421 PLCH2O75038 1416 aa13.05□□□□□ -0.32
CDV3-209ENST00000515421 EFCAB2Q5VUJ9 269 aa13.05□□□□□ -0.32
CDV3-209ENST00000515421 ARHGEF40Q8TER5 1519 aa13.04□□□□□ -0.32
CDV3-209ENST00000515421 KRI1Q8N9T8 703 aaKnown RBP13.04□□□□□ -0.32
CDV3-209ENST00000515421 ZMYM4Q5VZL5 1548 aa13.03□□□□□ -0.32
CDV3-209ENST00000515421 PDE4DQ08499 809 aa13.03□□□□□ -0.32
CDV3-209ENST00000515421 FBXO41Q8TF61 875 aa13.03□□□□□ -0.32
CDV3-209ENST00000515421 ATP1B4Q9UN42 357 aaPredicted RBP13.03□□□□□ -0.32
CDV3-209ENST00000515421 BCORL1Q5H9F3 1711 aa13.02□□□□□ -0.32
CDV3-209ENST00000515421 SCAPERQ9BY12 1400 aa13.02□□□□□ -0.33
CDV3-209ENST00000515421 CCDC82Q8N4S0 544 aa13.01□□□□□ -0.33
CDV3-209ENST00000515421 ZFYVE16Q7Z3T8 1539 aa13.01□□□□□ -0.33
CDV3-209ENST00000515421 PCF11O94913 1555 aaKnown RBP13□□□□□ -0.33
CDV3-209ENST00000515421 TRIM66O15016 1216 aa13□□□□□ -0.33
CDV3-209ENST00000515421 PYGBP11216 843 aa13□□□□□ -0.33
CDV3-209ENST00000515421 TTC37Q6PGP7 1564 aa12.99□□□□□ -0.33
CDV3-209ENST00000515421 CDK13Q14004 1512 aaKnown RBP12.99□□□□□ -0.33
CDV3-209ENST00000515421 CLIP1P30622 1438 aa12.99□□□□□ -0.33
CDV3-209ENST00000515421 GPIHBP1Q8IV16 184 aa12.99□□□□□ -0.33
CDV3-209ENST00000515421 KCTD17Q8N5Z5 321 aa12.99□□□□□ -0.33
CDV3-209ENST00000515421 RICTORQ6R327 1708 aa12.99□□□□□ -0.33
CDV3-209ENST00000515421 HECW1Q76N89 1606 aa12.99□□□□□ -0.33
CDV3-209ENST00000515421 MADDQ8WXG6 1647 aa12.99□□□□□ -0.33
CDV3-209ENST00000515421 LMTK3Q96Q04 1460 aa12.98□□□□□ -0.33
CDV3-209ENST00000515421 ARHGAP35Q9NRY4 1499 aa12.98□□□□□ -0.33
CDV3-209ENST00000515421 YEATS2Q9ULM3 1422 aa12.97□□□□□ -0.33
CDV3-209ENST00000515421 RASEFQ8IZ41 740 aa12.97□□□□□ -0.33
CDV3-209ENST00000515421 ATP10AO60312 1499 aa12.97□□□□□ -0.33
CDV3-209ENST00000515421 TROQ12816 1431 aaPredicted RBP12.97□□□□□ -0.33
CDV3-209ENST00000515421 ZNF316A6NFI3 1004 aaPredicted RBP12.95□□□□□ -0.34
CDV3-209ENST00000515421 TRAIPQ9BWF2 469 aa12.95□□□□□ -0.34
CDV3-209ENST00000515421 MFRPQ9BY79 579 aa12.95□□□□□ -0.34
CDV3-209ENST00000515421 ARIH1Q9Y4X5 557 aaPredicted RBP12.95□□□□□ -0.34
CDV3-209ENST00000515421 ZNF518AQ6AHZ1 1483 aa12.95□□□□□ -0.34
CDV3-209ENST00000515421 C9orf84Q5VXU9 1444 aa12.95□□□□□ -0.34
CDV3-209ENST00000515421 A6NJR5 290 aa12.94□□□□□ -0.34
CDV3-209ENST00000515421 MLECQ14165 292 aa12.94□□□□□ -0.34
CDV3-209ENST00000515421 KIF14Q15058 1648 aa12.93□□□□□ -0.34
CDV3-209ENST00000515421 FAM117AQ9C073 453 aa12.91□□□□□ -0.34
CDV3-209ENST00000515421 MYT1LQ9UL68 1186 aa12.91□□□□□ -0.34
CDV3-209ENST00000515421 RIMS1Q86UR5 1692 aaKnown RBP12.91□□□□□ -0.34
CDV3-209ENST00000515421 ARHGAP5Q13017 1502 aa12.91□□□□□ -0.34
CDV3-209ENST00000515421 TRAK2O60296 914 aa12.9□□□□□ -0.34
CDV3-209ENST00000515421 HSPA2P54652 639 aa12.9□□□□□ -0.34
CDV3-209ENST00000515421 AFAP1Q8N556 730 aa12.9□□□□□ -0.34
CDV3-209ENST00000515421 CCDC18Q5T9S5 1454 aa12.9□□□□□ -0.34
CDV3-209ENST00000515421 ARHGEF12Q9NZN5 1544 aa12.9□□□□□ -0.34
CDV3-209ENST00000515421 RAD21O60216 631 aa12.89□□□□□ -0.35
CDV3-209ENST00000515421 MNX1P50219 401 aaPredicted RBP12.89□□□□□ -0.35
CDV3-209ENST00000515421 RBM26Q5T8P6 1007 aaKnown RBP12.89□□□□□ -0.35
CDV3-209ENST00000515421 ZNF467Q7Z7K2 595 aaPredicted RBP12.89□□□□□ -0.35
CDV3-209ENST00000515421 DDRGK1Q96HY6 314 aa12.89□□□□□ -0.35
CDV3-209ENST00000515421 CASKIN1Q8WXD9 1431 aa12.89□□□□□ -0.35
CDV3-209ENST00000515421 MYO5CQ9NQX4 1742 aa12.89□□□□□ -0.35
CDV3-209ENST00000515421 MLH3Q9UHC1 1453 aa12.88□□□□□ -0.35
CDV3-209ENST00000515421 ONECUT3O60422 494 aaPredicted RBP12.88□□□□□ -0.35
CDV3-209ENST00000515421 ESF1Q9H501 851 aaKnown RBP12.88□□□□□ -0.35
CDV3-209ENST00000515421 KDM5CP41229 1560 aa12.87□□□□□ -0.35
CDV3-209ENST00000515421 PDAP1Q13442 181 aaKnown RBP12.87□□□□□ -0.35
CDV3-209ENST00000515421 LOC105371045A0A1W2PR82 267 aa12.86□□□□□ -0.35
CDV3-209ENST00000515421 CERKQ8TCT0 537 aa12.85□□□□□ -0.35
CDV3-209ENST00000515421 CREBZFQ9NS37 354 aa12.85□□□□□ -0.35
CDV3-209ENST00000515421 REREQ9P2R6 1566 aa12.85□□□□□ -0.35
CDV3-209ENST00000515421 PLEKHG3A1L390 1219 aa12.84□□□□□ -0.35
CDV3-209ENST00000515421 PPP1R37O75864 691 aa12.84□□□□□ -0.35
CDV3-209ENST00000515421 FER1L4A9Z1Z3 1794 aa12.83□□□□□ -0.36
CDV3-209ENST00000515421 UHRF1BP1Q6BDS2 1440 aa12.83□□□□□ -0.36
CDV3-209ENST00000515421 CEBPAP49715 358 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms