RNA–Protein interactions for RNA: ENST00000515064.5

LDB2-216, Transcript of LIM domain binding 2, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene LDB2, Length 2,295 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-216ENST00000515064 RAPGEF3O95398 923 aa9.31□□□□□ -0.92
LDB2-216ENST00000515064 HECW2Q9P2P5 1572 aa9.31□□□□□ -0.92
LDB2-216ENST00000515064 NCLP19338 710 aaKnown RBP9.31□□□□□ -0.92
LDB2-216ENST00000515064 CANXP27824 592 aaKnown RBP9.31□□□□□ -0.92
LDB2-216ENST00000515064 EXOC6Q8TAG9 804 aa9.31□□□□□ -0.92
LDB2-216ENST00000515064 RRP1P56182 461 aaKnown RBP9.3□□□□□ -0.92
LDB2-216ENST00000515064 MAP7D2Q96T17 732 aa9.3□□□□□ -0.92
LDB2-216ENST00000515064 ATP10BO94823 1461 aa9.3□□□□□ -0.92
LDB2-216ENST00000515064 CNGB1Q14028 1251 aaPredicted RBP9.29□□□□□ -0.92
LDB2-216ENST00000515064 NCOA2Q15596 1464 aa9.29□□□□□ -0.92
LDB2-216ENST00000515064 ESPNB1AK53 854 aa9.29□□□□□ -0.92
LDB2-216ENST00000515064 XRCC6P12956 609 aaKnown RBP eCLIP9.29□□□□□ -0.92
LDB2-216ENST00000515064 SMAP1Q8IYB5 467 aaPredicted RBP9.29□□□□□ -0.92
LDB2-216ENST00000515064 CFAP43Q8NDM7 1665 aa9.28□□□□□ -0.92
LDB2-216ENST00000515064 MAGI3Q5TCQ9 1506 aa9.28□□□□□ -0.92
LDB2-216ENST00000515064 GTF2E1P29083 439 aaPredicted RBP9.28□□□□□ -0.92
LDB2-216ENST00000515064 ZNF326Q5BKZ1 582 aaKnown RBP9.28□□□□□ -0.92
LDB2-216ENST00000515064 PLPPR3Q6T4P5 718 aa9.27□□□□□ -0.93
LDB2-216ENST00000515064 CHMP4BQ9H444 224 aaKnown RBP9.27□□□□□ -0.93
LDB2-216ENST00000515064 FHOD3Q2V2M9 1422 aa9.27□□□□□ -0.93
LDB2-216ENST00000515064 HSPA5P11021 654 aaKnown RBP9.26□□□□□ -0.93
LDB2-216ENST00000515064 TRIM44Q96DX7 344 aaPredicted RBP9.26□□□□□ -0.93
LDB2-216ENST00000515064 PANK2Q9BZ23 570 aa9.26□□□□□ -0.93
LDB2-216ENST00000515064 ZHX1Q9UKY1 873 aaPredicted RBP9.26□□□□□ -0.93
LDB2-216ENST00000515064 IPO4Q8TEX9 1081 aaKnown RBP9.25□□□□□ -0.93
LDB2-216ENST00000515064 KIAA1211Q6ZU35 1233 aa9.25□□□□□ -0.93
LDB2-216ENST00000515064 SENP3Q9H4L4 574 aaPredicted RBP9.25□□□□□ -0.93
LDB2-216ENST00000515064 FSD2A1L4K1 749 aa9.24□□□□□ -0.93
LDB2-216ENST00000515064 EIF4G2P78344 907 aaKnown RBP eCLIP9.24□□□□□ -0.93
LDB2-216ENST00000515064 FAM161AQ3B820 660 aa9.24□□□□□ -0.93
LDB2-216ENST00000515064 STAC3Q96MF2 364 aa9.24□□□□□ -0.93
LDB2-216ENST00000515064 MYH16Q9H6N6 1097 aa9.24□□□□□ -0.93
LDB2-216ENST00000515064 MRE11P49959 708 aa9.24□□□□□ -0.93
LDB2-216ENST00000515064 NUP153P49790 1475 aaKnown RBP9.23□□□□□ -0.93
LDB2-216ENST00000515064 TNNT2P45379 298 aaPredicted RBP9.23□□□□□ -0.93
LDB2-216ENST00000515064 SAMD9Q5K651 1589 aa9.23□□□□□ -0.93
LDB2-216ENST00000515064 RAPGEF6Q8TEU7 1601 aa9.23□□□□□ -0.93
LDB2-216ENST00000515064 FAM50AQ14320 339 aaKnown RBP9.22□□□□□ -0.93
LDB2-216ENST00000515064 PAXIP1Q6ZW49 1069 aaPredicted RBP9.22□□□□□ -0.93
LDB2-216ENST00000515064 BECN1Q14457 450 aa9.22□□□□□ -0.93
LDB2-216ENST00000515064 FAM13BQ9NYF5 915 aa9.22□□□□□ -0.93
LDB2-216ENST00000515064 RCAN3Q9UKA8 241 aa9.22□□□□□ -0.93
LDB2-216ENST00000515064 MTERF4Q7Z6M4 381 aaKnown RBP9.21□□□□□ -0.93
LDB2-216ENST00000515064 ABCA9Q8IUA7 1624 aa9.21□□□□□ -0.93
LDB2-216ENST00000515064 ARAP3Q8WWN8 1544 aa9.21□□□□□ -0.93
LDB2-216ENST00000515064 ERBB4Q15303 1308 aa9.21□□□□□ -0.93
LDB2-216ENST00000515064 UTP14CQ5TAP6 766 aaKnown RBP9.21□□□□□ -0.94
LDB2-216ENST00000515064 SKAP1Q86WV1 359 aa9.21□□□□□ -0.94
LDB2-216ENST00000515064 ATP1B4Q9UN42 357 aaPredicted RBP9.21□□□□□ -0.94
LDB2-216ENST00000515064 KTN1Q86UP2 1357 aaKnown RBP9.2□□□□□ -0.94
LDB2-216ENST00000515064 CCDC7Q96M83 1385 aa9.2□□□□□ -0.94
LDB2-216ENST00000515064 GZF1Q9H116 711 aaPredicted RBP9.2□□□□□ -0.94
LDB2-216ENST00000515064 SLKQ9H2G2 1235 aaPredicted RBP9.2□□□□□ -0.94
LDB2-216ENST00000515064 FRMPD1Q5SYB0 1578 aa9.2□□□□□ -0.94
LDB2-216ENST00000515064 DMTNQ08495 405 aa9.19□□□□□ -0.94
LDB2-216ENST00000515064 C8orf34Q49A92 452 aa9.19□□□□□ -0.94
LDB2-216ENST00000515064 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.19□□□□□ -0.94
LDB2-216ENST00000515064 PTPRMP28827 1452 aa9.19□□□□□ -0.94
LDB2-216ENST00000515064 TERF1P54274 439 aa9.19□□□□□ -0.94
LDB2-216ENST00000515064 HSPA2P54652 639 aa9.19□□□□□ -0.94
LDB2-216ENST00000515064 MLECQ14165 292 aa9.19□□□□□ -0.94
LDB2-216ENST00000515064 RSPH4AQ5TD94 716 aa9.19□□□□□ -0.94
LDB2-216ENST00000515064 PRDM10Q9NQV6 1147 aa9.19□□□□□ -0.94
LDB2-216ENST00000515064 CDK13Q14004 1512 aaKnown RBP9.18□□□□□ -0.94
LDB2-216ENST00000515064 NCOA1Q15788 1441 aa9.18□□□□□ -0.94
LDB2-216ENST00000515064 SENP3-EIF4A1A0A087X0R7 540 aa9.18□□□□□ -0.94
LDB2-216ENST00000515064 ANP32BQ92688 251 aaKnown RBP9.18□□□□□ -0.94
LDB2-216ENST00000515064 GRPEL1Q9HAV7 217 aa9.18□□□□□ -0.94
LDB2-216ENST00000515064 MADDQ8WXG6 1647 aa9.18□□□□□ -0.94
LDB2-216ENST00000515064 KLHL34Q8N239 644 aa9.17□□□□□ -0.94
LDB2-216ENST00000515064 ISY1Q9ULR0 285 aaKnown RBP9.17□□□□□ -0.94
LDB2-216ENST00000515064 TTC37Q6PGP7 1564 aa9.17□□□□□ -0.94
LDB2-216ENST00000515064 PLEKHD1A6NEE1 506 aa9.17□□□□□ -0.94
LDB2-216ENST00000515064 RIPK4P57078 832 aa9.17□□□□□ -0.94
LDB2-216ENST00000515064 ARID3AQ99856 593 aa9.17□□□□□ -0.94
LDB2-216ENST00000515064 SIGLEC1Q9BZZ2 1709 aa9.17□□□□□ -0.94
LDB2-216ENST00000515064 PPP4R3BQ5MIZ7 849 aa9.16□□□□□ -0.94
LDB2-216ENST00000515064 YEATS2Q9ULM3 1422 aa9.16□□□□□ -0.94
LDB2-216ENST00000515064 MAP3K1Q13233 1512 aa9.16□□□□□ -0.94
LDB2-216ENST00000515064 ADAMTSL3P82987 1691 aa9.16□□□□□ -0.94
LDB2-216ENST00000515064 OFD1O75665 1012 aa9.16□□□□□ -0.94
LDB2-216ENST00000515064 CENPQQ7L2Z9 268 aaPredicted RBP9.16□□□□□ -0.94
LDB2-216ENST00000515064 FANCAO15360 1455 aa9.15□□□□□ -0.94
LDB2-216ENST00000515064 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.15□□□□□ -0.94
LDB2-216ENST00000515064 NEO1Q92859 1461 aa9.15□□□□□ -0.95
LDB2-216ENST00000515064 BCORL1Q5H9F3 1711 aa9.14□□□□□ -0.95
LDB2-216ENST00000515064 MSNP26038 577 aaKnown RBP9.14□□□□□ -0.95
LDB2-216ENST00000515064 CRBNQ96SW2 442 aa9.14□□□□□ -0.95
LDB2-216ENST00000515064 MCM4P33991 863 aa9.14□□□□□ -0.95
LDB2-216ENST00000515064 TMC1Q8TDI8 760 aa9.14□□□□□ -0.95
LDB2-216ENST00000515064 RICTORQ6R327 1708 aa9.13□□□□□ -0.95
LDB2-216ENST00000515064 RIMS1Q86UR5 1692 aaKnown RBP9.13□□□□□ -0.95
LDB2-216ENST00000515064 DENND4BO75064 1496 aaPredicted RBP9.13□□□□□ -0.95
LDB2-216ENST00000515064 TRAK2O60296 914 aa9.13□□□□□ -0.95
LDB2-216ENST00000515064 KIF20AO95235 890 aa9.13□□□□□ -0.95
LDB2-216ENST00000515064 LMTK3Q96Q04 1460 aa9.13□□□□□ -0.95
LDB2-216ENST00000515064 TMEM51Q9NW97 253 aa9.12□□□□□ -0.95
LDB2-216ENST00000515064 R3HCC1Q9Y3T6 440 aaKnown RBP9.12□□□□□ -0.95
LDB2-216ENST00000515064 PHLDB1Q86UU1 1377 aa9.12□□□□□ -0.95
LDB2-216ENST00000515064 KDM2BQ8NHM5 1336 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms