RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 KDM5DQ9BY66 1539 aa36.74■■■■□ 3.47
SMAD1-214ENST00000514831 ILDR2Q71H61 639 aa36.73■■■■□ 3.47
SMAD1-214ENST00000514831 POLR1AO95602 1720 aaPredicted RBP36.72■■■■□ 3.47
SMAD1-214ENST00000514831 PZPP20742 1482 aa36.69■■■■□ 3.46
SMAD1-214ENST00000514831 ARHGEF5Q12774 1597 aa36.68■■■■□ 3.46
SMAD1-214ENST00000514831 TNRQ92752 1358 aa36.65■■■■□ 3.46
SMAD1-214ENST00000514831 KIF3BO15066 747 aa36.64■■■■□ 3.46
SMAD1-214ENST00000514831 RSPH4AQ5TD94 716 aa36.64■■■■□ 3.46
SMAD1-214ENST00000514831 NEURL4Q96JN8 1562 aa36.64■■■■□ 3.46
SMAD1-214ENST00000514831 SOCS7O14512 581 aa36.6■■■■□ 3.45
SMAD1-214ENST00000514831 UBAP1LF5GYI3 381 aa36.59■■■■□ 3.45
SMAD1-214ENST00000514831 FBXO31Q5XUX0 539 aaPredicted RBP36.56■■■■□ 3.44
SMAD1-214ENST00000514831 RNF17Q9BXT8 1623 aaKnown RBP36.54■■■■□ 3.44
SMAD1-214ENST00000514831 NLRP1Q9C000 1473 aa36.53■■■■□ 3.44
SMAD1-214ENST00000514831 CPS1P31327 1500 aa36.53■■■■□ 3.44
SMAD1-214ENST00000514831 WASHC2CQ9Y4E1 1318 aa36.53■■■■□ 3.44
SMAD1-214ENST00000514831 MAST1Q9Y2H9 1570 aa36.52■■■■□ 3.44
SMAD1-214ENST00000514831 ZC3H13Q5T200 1668 aaKnown RBP36.51■■■■□ 3.43
SMAD1-214ENST00000514831 LRRC9Q6ZRR7 1453 aa36.5■■■■□ 3.43
SMAD1-214ENST00000514831 MIA2Q96PC5 1412 aa36.49■■■■□ 3.43
SMAD1-214ENST00000514831 UGGT1Q9NYU2 1555 aa36.48■■■■□ 3.43
SMAD1-214ENST00000514831 VPS8Q8N3P4 1428 aa36.47■■■■□ 3.43
SMAD1-214ENST00000514831 DEPDC5O75140 1603 aa36.47■■■■□ 3.43
SMAD1-214ENST00000514831 EIF2AK4Q9P2K8 1649 aaKnown RBP36.47■■■■□ 3.43
SMAD1-214ENST00000514831 SHANK2Q9UPX8 1470 aa36.46■■■■□ 3.43
SMAD1-214ENST00000514831 TSPY4P0CV99 314 aa36.46■■■■□ 3.43
SMAD1-214ENST00000514831 TSPY10P0CW01 314 aa36.46■■■■□ 3.43
SMAD1-214ENST00000514831 ABCC3O15438 1527 aa36.44■■■■□ 3.42
SMAD1-214ENST00000514831 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.43■■■■□ 3.42
SMAD1-214ENST00000514831 VWDEQ8N2E2 1590 aa36.43■■■■□ 3.42
SMAD1-214ENST00000514831 MED14O60244 1454 aa36.42■■■■□ 3.42
SMAD1-214ENST00000514831 ANKLE2Q86XL3 938 aa36.4■■■■□ 3.42
SMAD1-214ENST00000514831 THEMISQ8N1K5 641 aaPredicted RBP36.4■■■■□ 3.42
SMAD1-214ENST00000514831 MROH1Q8NDA8 1641 aa36.38■■■■□ 3.41
SMAD1-214ENST00000514831 MAP3K1Q13233 1512 aa36.38■■■■□ 3.41
SMAD1-214ENST00000514831 IQGAP1P46940 1657 aa36.37■■■■□ 3.41
SMAD1-214ENST00000514831 NPHP4O75161 1426 aaPredicted RBP36.36■■■■□ 3.41
SMAD1-214ENST00000514831 ERVK-7P63135 1459 aa36.33■■■■□ 3.41
SMAD1-214ENST00000514831 CEP152O94986 1710 aa36.32■■■■□ 3.4
SMAD1-214ENST00000514831 MYOM3Q5VTT5 1437 aa36.31■■■■□ 3.4
SMAD1-214ENST00000514831 TOM1O60784 492 aa36.3■■■■□ 3.4
SMAD1-214ENST00000514831 DUOX2Q9NRD8 1548 aa36.26■■■■□ 3.4
SMAD1-214ENST00000514831 SCAF1Q9H7N4 1312 aaKnown RBP36.26■■■■□ 3.39
SMAD1-214ENST00000514831 ALKQ9UM73 1620 aa36.25■■■■□ 3.39
SMAD1-214ENST00000514831 UBR1Q8IWV7 1749 aa36.25■■■■□ 3.39
SMAD1-214ENST00000514831 MED1Q15648 1581 aaPredicted RBP36.24■■■■□ 3.39
SMAD1-214ENST00000514831 HSPA1LP34931 641 aa36.24■■■■□ 3.39
SMAD1-214ENST00000514831 PIP4K2BP78356 416 aa36.24■■■■□ 3.39
SMAD1-214ENST00000514831 CROCC2H7BZ55 1655 aa36.23■■■■□ 3.39
SMAD1-214ENST00000514831 STRCP1A6NGW2 1772 aa36.23■■■■□ 3.39
SMAD1-214ENST00000514831 KANK4Q5T7N3 995 aaPredicted RBP36.23■■■■□ 3.39
SMAD1-214ENST00000514831 SYNMO15061 1565 aa36.23■■■■□ 3.39
SMAD1-214ENST00000514831 PRDM15P57071 1507 aaPredicted RBP36.21■■■■□ 3.39
SMAD1-214ENST00000514831 CFAP65Q6ZU64 1925 aaKnown RBP36.18■■■■□ 3.38
SMAD1-214ENST00000514831 LRRC7Q96NW7 1537 aa36.14■■■■□ 3.38
SMAD1-214ENST00000514831 LOC105371045A0A1W2PR82 267 aa36.13■■■■□ 3.37
SMAD1-214ENST00000514831 ERBINQ96RT1 1412 aa36.13■■■■□ 3.37
SMAD1-214ENST00000514831 SCAF11Q99590 1463 aaKnown RBP36.12■■■■□ 3.37
SMAD1-214ENST00000514831 ARHGAP31Q2M1Z3 1444 aa36.12■■■■□ 3.37
SMAD1-214ENST00000514831 KIF15Q9NS87 1388 aa36.12■■■■□ 3.37
SMAD1-214ENST00000514831 ARHGAP23Q9P227 1491 aa36.11■■■■□ 3.37
SMAD1-214ENST00000514831 SLIT1O75093 1534 aa36.1■■■■□ 3.37
SMAD1-214ENST00000514831 PTPN23Q9H3S7 1636 aa36.1■■■■□ 3.37
SMAD1-214ENST00000514831 ABCC5O15440 1437 aa36.08■■■■□ 3.37
SMAD1-214ENST00000514831 PIK3C2BO00750 1634 aa36.01■■■■□ 3.36
SMAD1-214ENST00000514831 DAPK1P53355 1430 aa36■■■■□ 3.35
SMAD1-214ENST00000514831 KDM5AP29375 1690 aaKnown RBP35.98■■■■□ 3.35
SMAD1-214ENST00000514831 XIRP1Q702N8 1843 aaKnown RBP35.97■■■■□ 3.35
SMAD1-214ENST00000514831 LTKP29376 864 aa35.96■■■■□ 3.35
SMAD1-214ENST00000514831 RRP7BPQ9NSQ0 103 aa35.96■■■■□ 3.35
SMAD1-214ENST00000514831 LMTK2Q8IWU2 1503 aa35.94■■■■□ 3.34
SMAD1-214ENST00000514831 FGD6Q6ZV73 1430 aa35.94■■■■□ 3.34
SMAD1-214ENST00000514831 TXNDC2Q86VQ3 553 aa35.93■■■■□ 3.34
SMAD1-214ENST00000514831 KANK1Q14678 1352 aa35.92■■■■□ 3.34
SMAD1-214ENST00000514831 TMEM2Q9UHN6 1383 aa35.89■■■■□ 3.34
SMAD1-214ENST00000514831 EFCAB6Q5THR3 1501 aa35.88■■■■□ 3.33
SMAD1-214ENST00000514831 EID1Q9Y6B2 187 aa35.88■■■■□ 3.33
SMAD1-214ENST00000514831 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.87■■■■□ 3.33
SMAD1-214ENST00000514831 APLP2Q06481 763 aa35.86■■■■□ 3.33
SMAD1-214ENST00000514831 ANKRD30AQ9BXX3 1397 aa35.86■■■■□ 3.33
SMAD1-214ENST00000514831 PHF23Q9BUL5 403 aaPredicted RBP35.85■■■■□ 3.33
SMAD1-214ENST00000514831 ADGRB3O60242 1522 aa35.78■■■■□ 3.32
SMAD1-214ENST00000514831 NOS1P29475 1434 aa35.78■■■■□ 3.32
SMAD1-214ENST00000514831 SENP3Q9H4L4 574 aaPredicted RBP35.78■■■■□ 3.32
SMAD1-214ENST00000514831 STAG3Q9UJ98 1225 aa35.78■■■■□ 3.32
SMAD1-214ENST00000514831 ADGRL2O95490 1459 aa35.78■■■■□ 3.32
SMAD1-214ENST00000514831 TET3O43151 1660 aa35.76■■■■□ 3.32
SMAD1-214ENST00000514831 IDI1Q13907 227 aa35.75■■■■□ 3.31
SMAD1-214ENST00000514831 CHIC2Q9UKJ5 165 aa35.74■■■■□ 3.31
SMAD1-214ENST00000514831 NWD1Q149M9 1564 aa35.71■■■■□ 3.31
SMAD1-214ENST00000514831 FAM135BQ49AJ0 1406 aa35.7■■■■□ 3.31
SMAD1-214ENST00000514831 TMEM94Q12767 1356 aa35.69■■■■□ 3.3
SMAD1-214ENST00000514831 RPRD2Q5VT52 1461 aaKnown RBP35.68■■■■□ 3.3
SMAD1-214ENST00000514831 NKTRP30414 1462 aaKnown RBP35.67■■■■□ 3.3
SMAD1-214ENST00000514831 KCNA6P17658 529 aa35.66■■■■□ 3.3
SMAD1-214ENST00000514831 ROBO1Q9Y6N7 1651 aa35.63■■■■□ 3.29
SMAD1-214ENST00000514831 SLC52A1Q9NWF4 448 aa35.62■■■■□ 3.29
SMAD1-214ENST00000514831 SLC26A8Q96RN1 970 aa35.61■■■■□ 3.29
SMAD1-214ENST00000514831 MYO5BQ9ULV0 1848 aa35.61■■■■□ 3.29
SMAD1-214ENST00000514831 ANKRD50Q9ULJ7 1429 aa35.6■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms