RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 DHX57Q6P158 1386 aaKnown RBP9.53□□□□□ -0.88
CCDC30-214ENST00000514642 KANK4Q5T7N3 995 aaPredicted RBP9.53□□□□□ -0.88
CCDC30-214ENST00000514642 GPATCH3Q96I76 525 aa9.53□□□□□ -0.88
CCDC30-214ENST00000514642 CFAP44Q96MT7 982 aa9.53□□□□□ -0.88
CCDC30-214ENST00000514642 TOPBP1Q92547 1522 aa9.52□□□□□ -0.88
CCDC30-214ENST00000514642 NUTM2BA6NNL0 878 aaPredicted RBP9.52□□□□□ -0.88
CCDC30-214ENST00000514642 NUTM2EB1AL46 878 aaPredicted RBP9.52□□□□□ -0.88
CCDC30-214ENST00000514642 NUTM2AQ8IVF1 878 aaPredicted RBP9.52□□□□□ -0.88
CCDC30-214ENST00000514642 MYOM3Q5VTT5 1437 aa9.52□□□□□ -0.89
CCDC30-214ENST00000514642 MCCP23508 829 aa9.51□□□□□ -0.89
CCDC30-214ENST00000514642 TRIM34Q9BYJ4 488 aa9.51□□□□□ -0.89
CCDC30-214ENST00000514642 MINK1Q8N4C8 1332 aaPredicted RBP9.51□□□□□ -0.89
CCDC30-214ENST00000514642 IGF1RP08069 1367 aa9.51□□□□□ -0.89
CCDC30-214ENST00000514642 NOL10Q9BSC4 688 aaKnown RBP9.5□□□□□ -0.89
CCDC30-214ENST00000514642 GOLGA6L22H0YM25 854 aa9.5□□□□□ -0.89
CCDC30-214ENST00000514642 CWC22Q9HCG8 908 aaKnown RBP9.5□□□□□ -0.89
CCDC30-214ENST00000514642 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.5□□□□□ -0.89
CCDC30-214ENST00000514642 GTF3C3Q9Y5Q9 886 aa9.5□□□□□ -0.89
CCDC30-214ENST00000514642 CTDP1Q9Y5B0 961 aaPredicted RBP9.49□□□□□ -0.89
CCDC30-214ENST00000514642 HSPA5P11021 654 aaKnown RBP9.49□□□□□ -0.89
CCDC30-214ENST00000514642 RALBP1Q15311 655 aa9.49□□□□□ -0.89
CCDC30-214ENST00000514642 ESCO1Q5FWF5 840 aa9.48□□□□□ -0.89
CCDC30-214ENST00000514642 RAPGEF4Q8WZA2 1011 aa9.48□□□□□ -0.89
CCDC30-214ENST00000514642 TEFQ10587 303 aa9.48□□□□□ -0.89
CCDC30-214ENST00000514642 CGNL1Q0VF96 1302 aa9.48□□□□□ -0.89
CCDC30-214ENST00000514642 MIA2Q96PC5 1412 aa9.48□□□□□ -0.89
CCDC30-214ENST00000514642 GNL2Q13823 731 aaKnown RBP9.47□□□□□ -0.89
CCDC30-214ENST00000514642 DNAJC5BQ9UF47 199 aa9.47□□□□□ -0.89
CCDC30-214ENST00000514642 DDRGK1Q96HY6 314 aa9.47□□□□□ -0.89
CCDC30-214ENST00000514642 AMOTL1Q8IY63 956 aa9.47□□□□□ -0.89
CCDC30-214ENST00000514642 FBXW7Q969H0 707 aa9.46□□□□□ -0.89
CCDC30-214ENST00000514642 STAC3Q96MF2 364 aa9.46□□□□□ -0.89
CCDC30-214ENST00000514642 KIF15Q9NS87 1388 aa9.46□□□□□ -0.89
CCDC30-214ENST00000514642 KIAA1211Q6ZU35 1233 aa9.46□□□□□ -0.9
CCDC30-214ENST00000514642 RAB3GAP2Q9H2M9 1393 aa9.46□□□□□ -0.9
CCDC30-214ENST00000514642 SMG6Q86US8 1419 aaKnown RBP9.46□□□□□ -0.9
CCDC30-214ENST00000514642 HECW1Q76N89 1606 aa9.45□□□□□ -0.9
CCDC30-214ENST00000514642 RBM33Q96EV2 1170 aaKnown RBP9.44□□□□□ -0.9
CCDC30-214ENST00000514642 NLRP2Q9NX02 1062 aa9.44□□□□□ -0.9
CCDC30-214ENST00000514642 PPP1R1BQ9UD71 204 aaPredicted RBP9.44□□□□□ -0.9
CCDC30-214ENST00000514642 MAGI1Q96QZ7 1491 aaPredicted RBP9.44□□□□□ -0.9
CCDC30-214ENST00000514642 HMMRO75330 724 aa9.44□□□□□ -0.9
CCDC30-214ENST00000514642 FYCO1Q9BQS8 1478 aa9.43□□□□□ -0.9
CCDC30-214ENST00000514642 POLA1P09884 1462 aaPredicted RBP9.43□□□□□ -0.9
CCDC30-214ENST00000514642 CD109Q6YHK3 1445 aa9.43□□□□□ -0.9
CCDC30-214ENST00000514642 RRBP1Q9P2E9 1410 aaKnown RBP9.43□□□□□ -0.9
CCDC30-214ENST00000514642 NEXNQ0ZGT2 675 aa9.43□□□□□ -0.9
CCDC30-214ENST00000514642 STRN4Q9NRL3 753 aa9.42□□□□□ -0.9
CCDC30-214ENST00000514642 EFCAB5A4FU69 1503 aa9.42□□□□□ -0.9
CCDC30-214ENST00000514642 KIF21BO75037 1637 aa9.42□□□□□ -0.9
CCDC30-214ENST00000514642 SENP3-EIF4A1A0A087X0R7 540 aa9.42□□□□□ -0.9
CCDC30-214ENST00000514642 AKNAQ7Z591 1439 aa9.42□□□□□ -0.9
CCDC30-214ENST00000514642 GOLGA6L6A8MZA4 724 aa9.41□□□□□ -0.9
CCDC30-214ENST00000514642 PDE3BQ13370 1112 aa9.41□□□□□ -0.9
CCDC30-214ENST00000514642 VPS37DQ86XT2 251 aa9.41□□□□□ -0.9
CCDC30-214ENST00000514642 TEX14Q8IWB6 1497 aa9.41□□□□□ -0.9
CCDC30-214ENST00000514642 DDX58O95786 925 aaKnown RBP9.41□□□□□ -0.9
CCDC30-214ENST00000514642 HSP90B1P14625 803 aaKnown RBP9.41□□□□□ -0.9
CCDC30-214ENST00000514642 SCAPERQ9BY12 1400 aa9.41□□□□□ -0.9
CCDC30-214ENST00000514642 SLC4A10Q6U841 1118 aa9.41□□□□□ -0.9
CCDC30-214ENST00000514642 ITPRIPQ8IWB1 547 aa9.41□□□□□ -0.9
CCDC30-214ENST00000514642 AFAP1Q8N556 730 aa9.4□□□□□ -0.9
CCDC30-214ENST00000514642 CASKIN1Q8WXD9 1431 aa9.4□□□□□ -0.9
CCDC30-214ENST00000514642 ABTB2Q8N961 1025 aa9.4□□□□□ -0.9
CCDC30-214ENST00000514642 IRX6P78412 446 aaPredicted RBP9.4□□□□□ -0.91
CCDC30-214ENST00000514642 ANO8Q9HCE9 1232 aaPredicted RBP9.39□□□□□ -0.91
CCDC30-214ENST00000514642 ANP32EQ9BTT0 268 aa9.39□□□□□ -0.91
CCDC30-214ENST00000514642 PHLDB1Q86UU1 1377 aa9.39□□□□□ -0.91
CCDC30-214ENST00000514642 APBB1O00213 710 aa9.39□□□□□ -0.91
CCDC30-214ENST00000514642 NGEFQ8N5V2 710 aa9.39□□□□□ -0.91
CCDC30-214ENST00000514642 CENPJQ9HC77 1338 aaPredicted RBP9.39□□□□□ -0.91
CCDC30-214ENST00000514642 VPS53Q5VIR6 699 aa9.39□□□□□ -0.91
CCDC30-214ENST00000514642 KIAA0586Q9BVV6 1533 aa9.39□□□□□ -0.91
CCDC30-214ENST00000514642 RAPGEF3O95398 923 aa9.38□□□□□ -0.91
CCDC30-214ENST00000514642 LRRFIP1Q32MZ4 808 aaKnown RBP9.38□□□□□ -0.91
CCDC30-214ENST00000514642 HSP90AB1P08238 724 aaKnown RBP9.38□□□□□ -0.91
CCDC30-214ENST00000514642 NLRP6P59044 892 aa9.38□□□□□ -0.91
CCDC30-214ENST00000514642 TPRNQ4KMQ1 711 aa9.38□□□□□ -0.91
CCDC30-214ENST00000514642 SLC52A1Q9NWF4 448 aa9.38□□□□□ -0.91
CCDC30-214ENST00000514642 EHBP1L1Q8N3D4 1523 aa9.38□□□□□ -0.91
CCDC30-214ENST00000514642 GOLGA6L4A6NEF3 574 aa9.37□□□□□ -0.91
CCDC30-214ENST00000514642 NUTM2GQ5VZR2 741 aa9.37□□□□□ -0.91
CCDC30-214ENST00000514642 SMC4Q9NTJ3 1288 aa9.37□□□□□ -0.91
CCDC30-214ENST00000514642 USP35Q9P2H5 1018 aa9.37□□□□□ -0.91
CCDC30-214ENST00000514642 CUL7Q14999 1698 aa9.37□□□□□ -0.91
CCDC30-214ENST00000514642 NCBP3Q53F19 620 aaKnown RBP9.37□□□□□ -0.91
CCDC30-214ENST00000514642 KIF6Q6ZMV9 814 aa9.37□□□□□ -0.91
CCDC30-214ENST00000514642 L3MBTL2Q969R5 705 aa9.37□□□□□ -0.91
CCDC30-214ENST00000514642 TCEAL9Q9UHQ7 104 aa9.37□□□□□ -0.91
CCDC30-214ENST00000514642 TATP17735 454 aaPredicted RBP9.37□□□□□ -0.91
CCDC30-214ENST00000514642 TOM1L2Q6ZVM7 507 aa9.37□□□□□ -0.91
CCDC30-214ENST00000514642 TOMM22Q9NS69 142 aa9.37□□□□□ -0.91
CCDC30-214ENST00000514642 EPRSP07814 1512 aaKnown RBP9.37□□□□□ -0.91
CCDC30-214ENST00000514642 DIAPH1O60610 1272 aaKnown RBP9.36□□□□□ -0.91
CCDC30-214ENST00000514642 IQGAP2Q13576 1575 aa9.36□□□□□ -0.91
CCDC30-214ENST00000514642 ANKRD50Q9ULJ7 1429 aa9.36□□□□□ -0.91
CCDC30-214ENST00000514642 TOP2BQ02880 1626 aa9.36□□□□□ -0.91
CCDC30-214ENST00000514642 PLB1Q6P1J6 1458 aa9.36□□□□□ -0.91
CCDC30-214ENST00000514642 MARCH6O60337 910 aa9.36□□□□□ -0.91
CCDC30-214ENST00000514642 NLRP13Q86W25 1043 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms