RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 TSPY4P0CV99 314 aa21.02■□□□□ 0.96
PFDN1-206ENST00000514611 TSPY10P0CW01 314 aa21.02■□□□□ 0.96
PFDN1-206ENST00000514611 FAM135AQ9P2D6 1515 aa20.99■□□□□ 0.95
PFDN1-206ENST00000514611 PZPP20742 1482 aa20.98■□□□□ 0.95
PFDN1-206ENST00000514611 PLA2R1Q13018 1463 aa20.98■□□□□ 0.95
PFDN1-206ENST00000514611 NCKAP5LQ9HCH0 1330 aa20.97■□□□□ 0.95
PFDN1-206ENST00000514611 FBXO31Q5XUX0 539 aaPredicted RBP20.96■□□□□ 0.95
PFDN1-206ENST00000514611 WASHC2CQ9Y4E1 1318 aa20.96■□□□□ 0.95
PFDN1-206ENST00000514611 LTBP4Q8N2S1 1624 aa20.96■□□□□ 0.95
PFDN1-206ENST00000514611 A2ML1A8K2U0 1454 aa20.95■□□□□ 0.94
PFDN1-206ENST00000514611 TCOF1Q13428 1488 aaKnown RBP20.95■□□□□ 0.94
PFDN1-206ENST00000514611 RNF17Q9BXT8 1623 aaKnown RBP20.95■□□□□ 0.94
PFDN1-206ENST00000514611 TNRQ92752 1358 aa20.95■□□□□ 0.94
PFDN1-206ENST00000514611 DNMT1P26358 1616 aaKnown RBP20.93■□□□□ 0.94
PFDN1-206ENST00000514611 APLP2Q06481 763 aa20.93■□□□□ 0.94
PFDN1-206ENST00000514611 PTPN23Q9H3S7 1636 aa20.93■□□□□ 0.94
PFDN1-206ENST00000514611 ABCC3O15438 1527 aa20.92■□□□□ 0.94
PFDN1-206ENST00000514611 EIF2AK4Q9P2K8 1649 aaKnown RBP20.92■□□□□ 0.94
PFDN1-206ENST00000514611 MROH1Q8NDA8 1641 aa20.91■□□□□ 0.94
PFDN1-206ENST00000514611 CROCC2H7BZ55 1655 aa20.9■□□□□ 0.94
PFDN1-206ENST00000514611 ABCC5O15440 1437 aa20.9■□□□□ 0.94
PFDN1-206ENST00000514611 SHANK2Q9UPX8 1470 aa20.89■□□□□ 0.94
PFDN1-206ENST00000514611 FGD6Q6ZV73 1430 aa20.89■□□□□ 0.94
PFDN1-206ENST00000514611 PKD2Q13563 968 aa20.89■□□□□ 0.93
PFDN1-206ENST00000514611 DUOX2Q9NRD8 1548 aa20.88■□□□□ 0.93
PFDN1-206ENST00000514611 ZC3H13Q5T200 1668 aaKnown RBP20.88■□□□□ 0.93
PFDN1-206ENST00000514611 KIF15Q9NS87 1388 aa20.87■□□□□ 0.93
PFDN1-206ENST00000514611 ZNF335Q9H4Z2 1342 aaPredicted RBP20.87■□□□□ 0.93
PFDN1-206ENST00000514611 DAPK1P53355 1430 aa20.87■□□□□ 0.93
PFDN1-206ENST00000514611 NEURL4Q96JN8 1562 aa20.85■□□□□ 0.93
PFDN1-206ENST00000514611 NLRP1Q9C000 1473 aa20.84■□□□□ 0.93
PFDN1-206ENST00000514611 SPATA31D1Q6ZQQ2 1576 aa20.83■□□□□ 0.92
PFDN1-206ENST00000514611 CEP152O94986 1710 aa20.83■□□□□ 0.92
PFDN1-206ENST00000514611 ERVK-7P63135 1459 aa20.82■□□□□ 0.92
PFDN1-206ENST00000514611 IQSEC2Q5JU85 1478 aa20.82■□□□□ 0.92
PFDN1-206ENST00000514611 UGGT1Q9NYU2 1555 aa20.82■□□□□ 0.92
PFDN1-206ENST00000514611 ERBINQ96RT1 1412 aa20.82■□□□□ 0.92
PFDN1-206ENST00000514611 RRP7BPQ9NSQ0 103 aa20.82■□□□□ 0.92
PFDN1-206ENST00000514611 PRDM15P57071 1507 aaPredicted RBP20.82■□□□□ 0.92
PFDN1-206ENST00000514611 POLR1AO95602 1720 aaPredicted RBP20.81■□□□□ 0.92
PFDN1-206ENST00000514611 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.81■□□□□ 0.921e-20■■■■■ 166.9
PFDN1-206ENST00000514611 CHIC2Q9UKJ5 165 aa20.77■□□□□ 0.92
PFDN1-206ENST00000514611 DEPDC5O75140 1603 aa20.75■□□□□ 0.91
PFDN1-206ENST00000514611 THEMISQ8N1K5 641 aaPredicted RBP20.75■□□□□ 0.91
PFDN1-206ENST00000514611 ANKRD30AQ9BXX3 1397 aa20.73■□□□□ 0.91
PFDN1-206ENST00000514611 ANKLE2Q86XL3 938 aa20.73■□□□□ 0.91
PFDN1-206ENST00000514611 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.73■□□□□ 0.91
PFDN1-206ENST00000514611 NPHP4O75161 1426 aaPredicted RBP20.71■□□□□ 0.91
PFDN1-206ENST00000514611 ARHGAP31Q2M1Z3 1444 aa20.71■□□□□ 0.91
PFDN1-206ENST00000514611 MED14O60244 1454 aa20.7■□□□□ 0.9
PFDN1-206ENST00000514611 ADGRL2O95490 1459 aa20.7■□□□□ 0.9
PFDN1-206ENST00000514611 FAM50AQ14320 339 aaKnown RBP20.7■□□□□ 0.9
PFDN1-206ENST00000514611 VWDEQ8N2E2 1590 aa20.69■□□□□ 0.9
PFDN1-206ENST00000514611 UBR1Q8IWV7 1749 aa20.69■□□□□ 0.9
PFDN1-206ENST00000514611 IQGAP1P46940 1657 aa20.67■□□□□ 0.9
PFDN1-206ENST00000514611 UBAP1LF5GYI3 381 aa20.67■□□□□ 0.9
PFDN1-206ENST00000514611 KANK1Q14678 1352 aa20.67■□□□□ 0.9
PFDN1-206ENST00000514611 CPS1P31327 1500 aa20.67■□□□□ 0.9
PFDN1-206ENST00000514611 LMTK2Q8IWU2 1503 aa20.67■□□□□ 0.9
PFDN1-206ENST00000514611 CFAP65Q6ZU64 1925 aaKnown RBP20.65■□□□□ 0.9
PFDN1-206ENST00000514611 EFCAB6Q5THR3 1501 aa20.63■□□□□ 0.89
PFDN1-206ENST00000514611 SCAF11Q99590 1463 aaKnown RBP20.62■□□□□ 0.89
PFDN1-206ENST00000514611 PIK3C2BO00750 1634 aa20.62■□□□□ 0.89
PFDN1-206ENST00000514611 ARHGAP23Q9P227 1491 aa20.62■□□□□ 0.89
PFDN1-206ENST00000514611 SLIT1O75093 1534 aa20.61■□□□□ 0.89
PFDN1-206ENST00000514611 ANKRD50Q9ULJ7 1429 aa20.61■□□□□ 0.89
PFDN1-206ENST00000514611 SYNMO15061 1565 aa20.6■□□□□ 0.89
PFDN1-206ENST00000514611 LTKP29376 864 aa20.59■□□□□ 0.89
PFDN1-206ENST00000514611 DISP3Q9P2K9 1392 aa20.59■□□□□ 0.89
PFDN1-206ENST00000514611 STRCP1A6NGW2 1772 aa20.57■□□□□ 0.88
PFDN1-206ENST00000514611 NOS1P29475 1434 aa20.57■□□□□ 0.88
PFDN1-206ENST00000514611 TXNDC2Q86VQ3 553 aa20.55■□□□□ 0.88
PFDN1-206ENST00000514611 PPARGC1BQ86YN6 1023 aaKnown RBP20.55■□□□□ 0.88
PFDN1-206ENST00000514611 TMEM2Q9UHN6 1383 aa20.55■□□□□ 0.88
PFDN1-206ENST00000514611 IDI1Q13907 227 aa20.54■□□□□ 0.88
PFDN1-206ENST00000514611 SCAF1Q9H7N4 1312 aaKnown RBP20.53■□□□□ 0.88
PFDN1-206ENST00000514611 LRRC7Q96NW7 1537 aa20.53■□□□□ 0.88
PFDN1-206ENST00000514611 PIP4K2BP78356 416 aa20.53■□□□□ 0.88
PFDN1-206ENST00000514611 STAG3Q9UJ98 1225 aa20.53■□□□□ 0.88
PFDN1-206ENST00000514611 ALKQ9UM73 1620 aa20.53■□□□□ 0.88
PFDN1-206ENST00000514611 ADGRB3O60242 1522 aa20.53■□□□□ 0.88
PFDN1-206ENST00000514611 UNC13BO14795 1591 aa20.52■□□□□ 0.88
PFDN1-206ENST00000514611 KDM5AP29375 1690 aaKnown RBP20.51■□□□□ 0.87
PFDN1-206ENST00000514611 EID1Q9Y6B2 187 aa20.51■□□□□ 0.87
PFDN1-206ENST00000514611 RPRD2Q5VT52 1461 aaKnown RBP20.5■□□□□ 0.87
PFDN1-206ENST00000514611 ROCK1Q13464 1354 aa20.5■□□□□ 0.87
PFDN1-206ENST00000514611 TOM1O60784 492 aa20.5■□□□□ 0.87
PFDN1-206ENST00000514611 TET3O43151 1660 aa20.5■□□□□ 0.87
PFDN1-206ENST00000514611 ILDR2Q71H61 639 aa20.48■□□□□ 0.87
PFDN1-206ENST00000514611 HSPA1LP34931 641 aa20.47■□□□□ 0.87
PFDN1-206ENST00000514611 ITGAEP38570 1179 aa20.47■□□□□ 0.87
PFDN1-206ENST00000514611 SLC52A1Q9NWF4 448 aa20.45■□□□□ 0.86
PFDN1-206ENST00000514611 GCC2Q8IWJ2 1684 aa20.45■□□□□ 0.86
PFDN1-206ENST00000514611 IQGAP3Q86VI3 1631 aa20.42■□□□□ 0.86
PFDN1-206ENST00000514611 E9PCH4 1651 aa20.42■□□□□ 0.86
PFDN1-206ENST00000514611 ZFYVE9O95405 1425 aa20.4■□□□□ 0.86
PFDN1-206ENST00000514611 SLC26A8Q96RN1 970 aa20.4■□□□□ 0.86
PFDN1-206ENST00000514611 TMEM131LA2VDJ0 1609 aa20.39■□□□□ 0.86
PFDN1-206ENST00000514611 SENP3Q9H4L4 574 aaPredicted RBP20.39■□□□□ 0.85
PFDN1-206ENST00000514611 NUP155O75694 1391 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms