RNA–Protein interactions for RNA: ENST00000514588.1

CCND3-221, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-221ENST00000514588 PLA2R1Q13018 1463 aa38.12■■■■□ 3.69
CCND3-221ENST00000514588 KDM5DQ9BY66 1539 aa38.09■■■■□ 3.69
CCND3-221ENST00000514588 FAM135AQ9P2D6 1515 aa38.08■■■■□ 3.69
CCND3-221ENST00000514588 PKD2Q13563 968 aa38.07■■■■□ 3.68
CCND3-221ENST00000514588 TCOF1Q13428 1488 aaKnown RBP38.07■■■■□ 3.68
CCND3-221ENST00000514588 A2ML1A8K2U0 1454 aa38.05■■■■□ 3.68
CCND3-221ENST00000514588 FBXO31Q5XUX0 539 aaPredicted RBP38.05■■■■□ 3.68
CCND3-221ENST00000514588 WASHC2CQ9Y4E1 1318 aa38.05■■■■□ 3.68
CCND3-221ENST00000514588 MYOM3Q5VTT5 1437 aa38.04■■■■□ 3.68
CCND3-221ENST00000514588 PZPP20742 1482 aa38.03■■■■□ 3.68
CCND3-221ENST00000514588 TNRQ92752 1358 aa38.02■■■■□ 3.68
CCND3-221ENST00000514588 MIA2Q96PC5 1412 aa38.02■■■■□ 3.68
CCND3-221ENST00000514588 MAST1Q9Y2H9 1570 aa38.02■■■■□ 3.68
CCND3-221ENST00000514588 DNMT1P26358 1616 aaKnown RBP38■■■■□ 3.67
CCND3-221ENST00000514588 IQSEC2Q5JU85 1478 aa37.98■■■■□ 3.67
CCND3-221ENST00000514588 ZNF335Q9H4Z2 1342 aaPredicted RBP37.97■■■■□ 3.67
CCND3-221ENST00000514588 RNF17Q9BXT8 1623 aaKnown RBP37.92■■■■□ 3.66
CCND3-221ENST00000514588 EIF2AK4Q9P2K8 1649 aaKnown RBP37.86■■■■□ 3.65
CCND3-221ENST00000514588 ABCC3O15438 1527 aa37.86■■■■□ 3.65
CCND3-221ENST00000514588 APLP2Q06481 763 aa37.83■■■■□ 3.65
CCND3-221ENST00000514588 NLRP1Q9C000 1473 aa37.83■■■■□ 3.65
CCND3-221ENST00000514588 MROH1Q8NDA8 1641 aa37.81■■■■□ 3.64
CCND3-221ENST00000514588 ZC3H13Q5T200 1668 aaKnown RBP37.81■■■■□ 3.64
CCND3-221ENST00000514588 NEURL4Q96JN8 1562 aa37.8■■■■□ 3.64
CCND3-221ENST00000514588 DUOX2Q9NRD8 1548 aa37.8■■■■□ 3.64
CCND3-221ENST00000514588 ABCC5O15440 1437 aa37.78■■■■□ 3.64
CCND3-221ENST00000514588 POLR1AO95602 1720 aaPredicted RBP37.78■■■■□ 3.64
CCND3-221ENST00000514588 THEMISQ8N1K5 641 aaPredicted RBP37.78■■■■□ 3.64
CCND3-221ENST00000514588 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.78■■■■□ 3.643e-7■□□□□ 10.7
CCND3-221ENST00000514588 PTPN23Q9H3S7 1636 aa37.76■■■■□ 3.64
CCND3-221ENST00000514588 UGGT1Q9NYU2 1555 aa37.76■■■■□ 3.63
CCND3-221ENST00000514588 SHANK2Q9UPX8 1470 aa37.75■■■■□ 3.63
CCND3-221ENST00000514588 SPATA31D1Q6ZQQ2 1576 aa37.75■■■■□ 3.63
CCND3-221ENST00000514588 ANKLE2Q86XL3 938 aa37.74■■■■□ 3.63
CCND3-221ENST00000514588 KIF15Q9NS87 1388 aa37.74■■■■□ 3.63
CCND3-221ENST00000514588 CROCC2H7BZ55 1655 aa37.72■■■■□ 3.63
CCND3-221ENST00000514588 ERVK-7P63135 1459 aa37.71■■■■□ 3.63
CCND3-221ENST00000514588 FGD6Q6ZV73 1430 aa37.7■■■■□ 3.63
CCND3-221ENST00000514588 UBAP1LF5GYI3 381 aa37.7■■■■□ 3.63
CCND3-221ENST00000514588 RRP7BPQ9NSQ0 103 aa37.69■■■■□ 3.62
CCND3-221ENST00000514588 DAPK1P53355 1430 aa37.69■■■■□ 3.62
CCND3-221ENST00000514588 CEP152O94986 1710 aa37.68■■■■□ 3.62
CCND3-221ENST00000514588 ERBINQ96RT1 1412 aa37.67■■■■□ 3.62
CCND3-221ENST00000514588 DEPDC5O75140 1603 aa37.64■■■■□ 3.62
CCND3-221ENST00000514588 MED14O60244 1454 aa37.64■■■■□ 3.62
CCND3-221ENST00000514588 NPHP4O75161 1426 aaPredicted RBP37.63■■■■□ 3.61
CCND3-221ENST00000514588 PRDM15P57071 1507 aaPredicted RBP37.63■■■■□ 3.61
CCND3-221ENST00000514588 DISP3Q9P2K9 1392 aa37.63■■■■□ 3.61
CCND3-221ENST00000514588 CPS1P31327 1500 aa37.6■■■■□ 3.61
CCND3-221ENST00000514588 VWDEQ8N2E2 1590 aa37.58■■■■□ 3.61
CCND3-221ENST00000514588 ARHGAP31Q2M1Z3 1444 aa37.57■■■■□ 3.6
CCND3-221ENST00000514588 CFAP65Q6ZU64 1925 aaKnown RBP37.55■■■■□ 3.6
CCND3-221ENST00000514588 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.54■■■■□ 3.6
CCND3-221ENST00000514588 CHIC2Q9UKJ5 165 aa37.54■■■■□ 3.6
CCND3-221ENST00000514588 ANKRD30AQ9BXX3 1397 aa37.54■■■■□ 3.6
CCND3-221ENST00000514588 IQGAP1P46940 1657 aa37.52■■■■□ 3.6
CCND3-221ENST00000514588 UBR1Q8IWV7 1749 aa37.51■■■■□ 3.6
CCND3-221ENST00000514588 KANK1Q14678 1352 aa37.47■■■■□ 3.59
CCND3-221ENST00000514588 ILDR2Q71H61 639 aa37.46■■■■□ 3.59
CCND3-221ENST00000514588 LMTK2Q8IWU2 1503 aa37.41■■■■□ 3.58
CCND3-221ENST00000514588 SCAF11Q99590 1463 aaKnown RBP37.41■■■■□ 3.58
CCND3-221ENST00000514588 ARHGAP23Q9P227 1491 aa37.41■■■■□ 3.58
CCND3-221ENST00000514588 TOM1O60784 492 aa37.41■■■■□ 3.58
CCND3-221ENST00000514588 ADGRL2O95490 1459 aa37.4■■■■□ 3.58
CCND3-221ENST00000514588 SLIT1O75093 1534 aa37.4■■■■□ 3.58
CCND3-221ENST00000514588 LTKP29376 864 aa37.38■■■■□ 3.57
CCND3-221ENST00000514588 PIP4K2BP78356 416 aa37.38■■■■□ 3.57
CCND3-221ENST00000514588 FAM50AQ14320 339 aaKnown RBP37.38■■■■□ 3.57
CCND3-221ENST00000514588 SCAF1Q9H7N4 1312 aaKnown RBP37.37■■■■□ 3.57
CCND3-221ENST00000514588 TXNDC2Q86VQ3 553 aa37.36■■■■□ 3.57
CCND3-221ENST00000514588 STRCP1A6NGW2 1772 aa37.35■■■■□ 3.57
CCND3-221ENST00000514588 PIK3C2BO00750 1634 aa37.35■■■■□ 3.57
CCND3-221ENST00000514588 LRRC7Q96NW7 1537 aa37.32■■■■□ 3.57
CCND3-221ENST00000514588 HSPA1LP34931 641 aa37.31■■■■□ 3.56
CCND3-221ENST00000514588 ALKQ9UM73 1620 aa37.3■■■■□ 3.56
CCND3-221ENST00000514588 TMEM2Q9UHN6 1383 aa37.29■■■■□ 3.56
CCND3-221ENST00000514588 EID1Q9Y6B2 187 aa37.29■■■■□ 3.56
CCND3-221ENST00000514588 EFCAB6Q5THR3 1501 aa37.29■■■■□ 3.56
CCND3-221ENST00000514588 IDI1Q13907 227 aa37.28■■■■□ 3.56
CCND3-221ENST00000514588 STAG3Q9UJ98 1225 aa37.27■■■■□ 3.56
CCND3-221ENST00000514588 ANKRD50Q9ULJ7 1429 aa37.27■■■■□ 3.56
CCND3-221ENST00000514588 SYNMO15061 1565 aa37.26■■■■□ 3.56
CCND3-221ENST00000514588 NOS1P29475 1434 aa37.26■■■■□ 3.55
CCND3-221ENST00000514588 KDM5AP29375 1690 aaKnown RBP37.23■■■■□ 3.55
CCND3-221ENST00000514588 SOCS7O14512 581 aa37.2■■■■□ 3.55
CCND3-221ENST00000514588 RPRD2Q5VT52 1461 aaKnown RBP37.14■■■■□ 3.54
CCND3-221ENST00000514588 ADGRB3O60242 1522 aa37.14■■■■□ 3.54
CCND3-221ENST00000514588 SLC52A1Q9NWF4 448 aa37.13■■■■□ 3.53
CCND3-221ENST00000514588 TET3O43151 1660 aa37.09■■■■□ 3.53
CCND3-221ENST00000514588 ROCK1Q13464 1354 aa37.06■■■■□ 3.52
CCND3-221ENST00000514588 UNC13BO14795 1591 aa37.06■■■■□ 3.52
CCND3-221ENST00000514588 MED1Q15648 1581 aaPredicted RBP37.06■■■■□ 3.52
CCND3-221ENST00000514588 XIRP1Q702N8 1843 aaKnown RBP37.04■■■■□ 3.52
CCND3-221ENST00000514588 SLC26A8Q96RN1 970 aa37.04■■■■□ 3.52
CCND3-221ENST00000514588 KCNA6P17658 529 aa37.01■■■■□ 3.52
CCND3-221ENST00000514588 GCC2Q8IWJ2 1684 aa37■■■■□ 3.51
CCND3-221ENST00000514588 SENP3Q9H4L4 574 aaPredicted RBP36.99■■■■□ 3.51
CCND3-221ENST00000514588 TMEM94Q12767 1356 aa36.97■■■■□ 3.51
CCND3-221ENST00000514588 ZFYVE9O95405 1425 aa36.96■■■■□ 3.51
CCND3-221ENST00000514588 PPARGC1BQ86YN6 1023 aaKnown RBP36.95■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms