RNA–Protein interactions for RNA: ENST00000514168.1

SMAD1-212, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-212ENST00000514168 MIA2Q96PC5 1412 aa18.22■□□□□ 0.51
SMAD1-212ENST00000514168 RTEL1-TNFRSF6BF6WH68 1400 aa18.21■□□□□ 0.51
SMAD1-212ENST00000514168 SOCS7O14512 581 aa18.2■□□□□ 0.5
SMAD1-212ENST00000514168 PKD2Q13563 968 aa18.2■□□□□ 0.5
SMAD1-212ENST00000514168 GGT6Q6P531 493 aa18.2■□□□□ 0.5
SMAD1-212ENST00000514168 PPP6R1Q9UPN7 881 aa18.2■□□□□ 0.5
SMAD1-212ENST00000514168 FGD6Q6ZV73 1430 aa18.19■□□□□ 0.5
SMAD1-212ENST00000514168 A2ML1A8K2U0 1454 aa18.19■□□□□ 0.5
SMAD1-212ENST00000514168 PTPN23Q9H3S7 1636 aa18.18■□□□□ 0.5
SMAD1-212ENST00000514168 NEURL4Q96JN8 1562 aa18.17■□□□□ 0.5
SMAD1-212ENST00000514168 DHX29Q7Z478 1369 aaKnown RBP18.17■□□□□ 0.5
SMAD1-212ENST00000514168 POLR1AO95602 1720 aaPredicted RBP18.16■□□□□ 0.5
SMAD1-212ENST00000514168 CAMSAP2Q08AD1 1489 aa18.14■□□□□ 0.5
SMAD1-212ENST00000514168 RRBP1Q9P2E9 1410 aaKnown RBP18.13■□□□□ 0.49
SMAD1-212ENST00000514168 PZPP20742 1482 aa18.13■□□□□ 0.49
SMAD1-212ENST00000514168 FAM135AQ9P2D6 1515 aa18.13■□□□□ 0.49
SMAD1-212ENST00000514168 CCDC141Q6ZP82 1450 aa18.12■□□□□ 0.49
SMAD1-212ENST00000514168 KDM5DQ9BY66 1539 aa18.12■□□□□ 0.49
SMAD1-212ENST00000514168 FBXO31Q5XUX0 539 aaPredicted RBP18.11■□□□□ 0.49
SMAD1-212ENST00000514168 UBAP1LF5GYI3 381 aa18.1■□□□□ 0.49
SMAD1-212ENST00000514168 FAM50AQ14320 339 aaKnown RBP18.1■□□□□ 0.49
SMAD1-212ENST00000514168 ARHGEF5Q12774 1597 aa18.09■□□□□ 0.49
SMAD1-212ENST00000514168 TNRQ92752 1358 aa18.09■□□□□ 0.49
SMAD1-212ENST00000514168 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.09■□□□□ 0.49
SMAD1-212ENST00000514168 VWDEQ8N2E2 1590 aa18.08■□□□□ 0.48
SMAD1-212ENST00000514168 KIF3BO15066 747 aa18.07■□□□□ 0.48
SMAD1-212ENST00000514168 ALKQ9UM73 1620 aa18.07■□□□□ 0.48
SMAD1-212ENST00000514168 RSPH4AQ5TD94 716 aa18.06■□□□□ 0.48
SMAD1-212ENST00000514168 RNF17Q9BXT8 1623 aaKnown RBP18.05■□□□□ 0.48
SMAD1-212ENST00000514168 CPS1P31327 1500 aa18.05■□□□□ 0.48
SMAD1-212ENST00000514168 SHANK2Q9UPX8 1470 aa18.05■□□□□ 0.48
SMAD1-212ENST00000514168 DEPDC5O75140 1603 aa18.05■□□□□ 0.48
SMAD1-212ENST00000514168 STRCP1A6NGW2 1772 aa18.04■□□□□ 0.48
SMAD1-212ENST00000514168 CROCC2H7BZ55 1655 aa18.03■□□□□ 0.48
SMAD1-212ENST00000514168 MED14O60244 1454 aa18.03■□□□□ 0.48
SMAD1-212ENST00000514168 NLRP1Q9C000 1473 aa18.02■□□□□ 0.48
SMAD1-212ENST00000514168 MAST1Q9Y2H9 1570 aa18.02■□□□□ 0.48
SMAD1-212ENST00000514168 MROH1Q8NDA8 1641 aa18.01■□□□□ 0.47
SMAD1-212ENST00000514168 DAPK1P53355 1430 aa18.01■□□□□ 0.47
SMAD1-212ENST00000514168 UGGT1Q9NYU2 1555 aa18■□□□□ 0.47
SMAD1-212ENST00000514168 ABCC3O15438 1527 aa18■□□□□ 0.47
SMAD1-212ENST00000514168 WASHC2CQ9Y4E1 1318 aa17.99■□□□□ 0.47
SMAD1-212ENST00000514168 ABCC5O15440 1437 aa17.99■□□□□ 0.47
SMAD1-212ENST00000514168 IQGAP1P46940 1657 aa17.99■□□□□ 0.47
SMAD1-212ENST00000514168 ZC3H13Q5T200 1668 aaKnown RBP17.99■□□□□ 0.47
SMAD1-212ENST00000514168 TSPY4P0CV99 314 aa17.98■□□□□ 0.47
SMAD1-212ENST00000514168 TSPY10P0CW01 314 aa17.98■□□□□ 0.47
SMAD1-212ENST00000514168 HSPA1LP34931 641 aa17.98■□□□□ 0.47
SMAD1-212ENST00000514168 MED1Q15648 1581 aaPredicted RBP17.98■□□□□ 0.47
SMAD1-212ENST00000514168 EIF2AK4Q9P2K8 1649 aaKnown RBP17.98■□□□□ 0.47
SMAD1-212ENST00000514168 TRIM26Q12899 539 aaPredicted RBP17.97■□□□□ 0.47
SMAD1-212ENST00000514168 CFAP65Q6ZU64 1925 aaKnown RBP17.97■□□□□ 0.47
SMAD1-212ENST00000514168 NPHP4O75161 1426 aaPredicted RBP17.97■□□□□ 0.47
SMAD1-212ENST00000514168 ITGAEP38570 1179 aa17.96■□□□□ 0.47
SMAD1-212ENST00000514168 ANKLE2Q86XL3 938 aa17.96■□□□□ 0.47
SMAD1-212ENST00000514168 CEP152O94986 1710 aa17.95■□□□□ 0.46
SMAD1-212ENST00000514168 THEMISQ8N1K5 641 aaPredicted RBP17.95■□□□□ 0.46
SMAD1-212ENST00000514168 ERVK-7P63135 1459 aa17.95■□□□□ 0.46
SMAD1-212ENST00000514168 UBR1Q8IWV7 1749 aa17.94■□□□□ 0.46
SMAD1-212ENST00000514168 TOM1O60784 492 aa17.92■□□□□ 0.46
SMAD1-212ENST00000514168 PIP4K2BP78356 416 aa17.92■□□□□ 0.46
SMAD1-212ENST00000514168 CHIC2Q9UKJ5 165 aa17.91■□□□□ 0.46
SMAD1-212ENST00000514168 LRRC7Q96NW7 1537 aa17.91■□□□□ 0.46
SMAD1-212ENST00000514168 XIRP1Q702N8 1843 aaKnown RBP17.9■□□□□ 0.46
SMAD1-212ENST00000514168 ADGRL2O95490 1459 aa17.89■□□□□ 0.45
SMAD1-212ENST00000514168 SYNMO15061 1565 aa17.89■□□□□ 0.45
SMAD1-212ENST00000514168 ANKRD30AQ9BXX3 1397 aa17.89■□□□□ 0.45
SMAD1-212ENST00000514168 ROCK1Q13464 1354 aa17.88■□□□□ 0.45
SMAD1-212ENST00000514168 ARHGAP23Q9P227 1491 aa17.88■□□□□ 0.45
SMAD1-212ENST00000514168 SCAF1Q9H7N4 1312 aaKnown RBP17.87■□□□□ 0.45
SMAD1-212ENST00000514168 PRDM15P57071 1507 aaPredicted RBP17.87■□□□□ 0.45
SMAD1-212ENST00000514168 SLIT1O75093 1534 aa17.86■□□□□ 0.45
SMAD1-212ENST00000514168 DUOX2Q9NRD8 1548 aa17.86■□□□□ 0.45
SMAD1-212ENST00000514168 ARHGAP31Q2M1Z3 1444 aa17.84■□□□□ 0.45
SMAD1-212ENST00000514168 GCC2Q8IWJ2 1684 aa17.83■□□□□ 0.45
SMAD1-212ENST00000514168 SCAF11Q99590 1463 aaKnown RBP17.83■□□□□ 0.45
SMAD1-212ENST00000514168 LTKP29376 864 aa17.83■□□□□ 0.44
SMAD1-212ENST00000514168 RRP7BPQ9NSQ0 103 aa17.83■□□□□ 0.44
SMAD1-212ENST00000514168 KIF15Q9NS87 1388 aa17.82■□□□□ 0.44
SMAD1-212ENST00000514168 PIK3C2BO00750 1634 aa17.81■□□□□ 0.44
SMAD1-212ENST00000514168 HFM1A2PYH4 1435 aa17.79■□□□□ 0.44
SMAD1-212ENST00000514168 ERBINQ96RT1 1412 aa17.79■□□□□ 0.44
SMAD1-212ENST00000514168 NAIPQ13075 1403 aa17.78■□□□□ 0.44
SMAD1-212ENST00000514168 KDM5AP29375 1690 aaKnown RBP17.77■□□□□ 0.44
SMAD1-212ENST00000514168 PCGF6Q9BYE7 350 aa17.76■□□□□ 0.43
SMAD1-212ENST00000514168 ANKRD50Q9ULJ7 1429 aa17.75■□□□□ 0.43
SMAD1-212ENST00000514168 LMTK2Q8IWU2 1503 aa17.75■□□□□ 0.43
SMAD1-212ENST00000514168 TXNDC2Q86VQ3 553 aa17.74■□□□□ 0.43
SMAD1-212ENST00000514168 TMEM2Q9UHN6 1383 aa17.74■□□□□ 0.43
SMAD1-212ENST00000514168 TET3O43151 1660 aa17.74■□□□□ 0.43
SMAD1-212ENST00000514168 SETD5Q9C0A6 1442 aa17.73■□□□□ 0.43
SMAD1-212ENST00000514168 RGS17Q9UGC6 210 aaPredicted RBP17.72■□□□□ 0.43
SMAD1-212ENST00000514168 EFCAB6Q5THR3 1501 aa17.7■□□□□ 0.42
SMAD1-212ENST00000514168 NOS1P29475 1434 aa17.7■□□□□ 0.42
SMAD1-212ENST00000514168 IDI1Q13907 227 aa17.68■□□□□ 0.42
SMAD1-212ENST00000514168 FAM135BQ49AJ0 1406 aa17.68■□□□□ 0.42
SMAD1-212ENST00000514168 SENP3Q9H4L4 574 aaPredicted RBP17.68■□□□□ 0.42
SMAD1-212ENST00000514168 RAB3GAP2Q9H2M9 1393 aa17.67■□□□□ 0.42
SMAD1-212ENST00000514168 NWD1Q149M9 1564 aa17.67■□□□□ 0.42
SMAD1-212ENST00000514168 PHF23Q9BUL5 403 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms