RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 HECW2Q9P2P5 1572 aa18.54■□□□□ 0.56
PVT1-203ENST00000513868 MLH3Q9UHC1 1453 aa18.54■□□□□ 0.56
PVT1-203ENST00000513868 FAM69CQ0P6D2 419 aa18.52■□□□□ 0.56
PVT1-203ENST00000513868 TEX14Q8IWB6 1497 aa18.51■□□□□ 0.55
PVT1-203ENST00000513868 DHX29Q7Z478 1369 aaKnown RBP18.5■□□□□ 0.55
PVT1-203ENST00000513868 ABCA6Q8N139 1617 aa18.5■□□□□ 0.55
PVT1-203ENST00000513868 MROH1Q8NDA8 1641 aa18.49■□□□□ 0.55
PVT1-203ENST00000513868 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.49■□□□□ 0.551e-6■■■■□ 19.8
PVT1-203ENST00000513868 FRMPD1Q5SYB0 1578 aa18.49■□□□□ 0.55
PVT1-203ENST00000513868 VWDEQ8N2E2 1590 aa18.49■□□□□ 0.55
PVT1-203ENST00000513868 L3MBTL2Q969R5 705 aa18.47■□□□□ 0.55
PVT1-203ENST00000513868 E9PCH4 1651 aa18.47■□□□□ 0.55
PVT1-203ENST00000513868 BCORL1Q5H9F3 1711 aa18.47■□□□□ 0.55
PVT1-203ENST00000513868 RAPGEF3O95398 923 aa18.46■□□□□ 0.55
PVT1-203ENST00000513868 A2MP01023 1474 aa18.46■□□□□ 0.55
PVT1-203ENST00000513868 PRDM15P57071 1507 aaPredicted RBP18.46■□□□□ 0.55
PVT1-203ENST00000513868 MYT1LQ9UL68 1186 aa18.45■□□□□ 0.54
PVT1-203ENST00000513868 RNF17Q9BXT8 1623 aaKnown RBP18.45■□□□□ 0.54
PVT1-203ENST00000513868 PLA2R1Q13018 1463 aa18.44■□□□□ 0.54
PVT1-203ENST00000513868 TET3O43151 1660 aa18.44■□□□□ 0.54
PVT1-203ENST00000513868 DIP2CQ9Y2E4 1556 aa18.44■□□□□ 0.54
PVT1-203ENST00000513868 DIEXFQ68CQ4 756 aaKnown RBP18.43■□□□□ 0.54
PVT1-203ENST00000513868 ATP10AO60312 1499 aa18.42■□□□□ 0.54
PVT1-203ENST00000513868 ZMYM4Q5VZL5 1548 aa18.41■□□□□ 0.54
PVT1-203ENST00000513868 KIF3BO15066 747 aa18.41■□□□□ 0.54
PVT1-203ENST00000513868 CEP152O94986 1710 aa18.39■□□□□ 0.53
PVT1-203ENST00000513868 SPHKAPQ2M3C7 1700 aa18.39■□□□□ 0.53
PVT1-203ENST00000513868 YEATS2Q9ULM3 1422 aa18.36■□□□□ 0.53
PVT1-203ENST00000513868 NBPF8Q3BBV2 869 aa18.36■□□□□ 0.53
PVT1-203ENST00000513868 KANK1Q14678 1352 aa18.36■□□□□ 0.53
PVT1-203ENST00000513868 CCDC144AA2RUR9 1427 aa18.35■□□□□ 0.53
PVT1-203ENST00000513868 LMTK2Q8IWU2 1503 aa18.35■□□□□ 0.53
PVT1-203ENST00000513868 TRPM2O94759 1503 aa18.33■□□□□ 0.52
PVT1-203ENST00000513868 EFCAB6Q5THR3 1501 aa18.33■□□□□ 0.52
PVT1-203ENST00000513868 PTPRTO14522 1441 aa18.33■□□□□ 0.52
PVT1-203ENST00000513868 COL17A1Q9UMD9 1497 aaPredicted RBP18.31■□□□□ 0.52
PVT1-203ENST00000513868 UHRF1BP1Q6BDS2 1440 aa18.31■□□□□ 0.52
PVT1-203ENST00000513868 CLTCL1P53675 1640 aa18.3■□□□□ 0.52
PVT1-203ENST00000513868 CFAP65Q6ZU64 1925 aaKnown RBP18.3■□□□□ 0.52
PVT1-203ENST00000513868 REREQ9P2R6 1566 aa18.28■□□□□ 0.52
PVT1-203ENST00000513868 HIRIP3Q9BW71 556 aaPredicted RBP18.28■□□□□ 0.52
PVT1-203ENST00000513868 ABCC3O15438 1527 aa18.27■□□□□ 0.52
PVT1-203ENST00000513868 SIGLEC1Q9BZZ2 1709 aa18.27■□□□□ 0.52
PVT1-203ENST00000513868 CAMSAP1Q5T5Y3 1602 aa18.26■□□□□ 0.51
PVT1-203ENST00000513868 SPATA31E1Q6ZUB1 1445 aa18.25■□□□□ 0.51
PVT1-203ENST00000513868 ZC3H13Q5T200 1668 aaKnown RBP18.25■□□□□ 0.51
PVT1-203ENST00000513868 GGT6Q6P531 493 aa18.25■□□□□ 0.51
PVT1-203ENST00000513868 KIF1BO60333 1816 aa18.24■□□□□ 0.51
PVT1-203ENST00000513868 DCAF11Q8TEB1 546 aa18.22■□□□□ 0.51
PVT1-203ENST00000513868 TRPM1Q7Z4N2 1603 aa18.22■□□□□ 0.51
PVT1-203ENST00000513868 RALGAPBQ86X10 1494 aa18.22■□□□□ 0.51
PVT1-203ENST00000513868 HSPA5P11021 654 aaKnown RBP18.22■□□□□ 0.51
PVT1-203ENST00000513868 NEURL4Q96JN8 1562 aa18.22■□□□□ 0.51
PVT1-203ENST00000513868 AGLP35573 1532 aa18.21■□□□□ 0.51
PVT1-203ENST00000513868 NPATQ14207 1427 aa18.21■□□□□ 0.51
PVT1-203ENST00000513868 UGGT1Q9NYU2 1555 aa18.21■□□□□ 0.51
PVT1-203ENST00000513868 ARHGEF40Q8TER5 1519 aa18.21■□□□□ 0.51
PVT1-203ENST00000513868 POLR1AO95602 1720 aaPredicted RBP18.2■□□□□ 0.5
PVT1-203ENST00000513868 RGL3Q3MIN7 710 aa18.2■□□□□ 0.5
PVT1-203ENST00000513868 KDM2AQ9Y2K7 1162 aa18.2■□□□□ 0.5
PVT1-203ENST00000513868 EIF4G2P78344 907 aaKnown RBP eCLIP18.19■□□□□ 0.59e-7■■■■□ 21
PVT1-203ENST00000513868 PRAG1Q86YV5 1406 aa18.19■□□□□ 0.5
PVT1-203ENST00000513868 WASHC2CQ9Y4E1 1318 aa18.19■□□□□ 0.5
PVT1-203ENST00000513868 ZNF326Q5BKZ1 582 aaKnown RBP18.18■□□□□ 0.5
PVT1-203ENST00000513868 MROH2AA6NES4 1674 aa18.18■□□□□ 0.5
PVT1-203ENST00000513868 MIER1Q8N108 512 aa18.17■□□□□ 0.5
PVT1-203ENST00000513868 IFT172Q9UG01 1749 aa18.17■□□□□ 0.5
PVT1-203ENST00000513868 ARHGAP31Q2M1Z3 1444 aa18.15■□□□□ 0.5
PVT1-203ENST00000513868 PIK3C2BO00750 1634 aa18.14■□□□□ 0.5
PVT1-203ENST00000513868 DNAJC5Q9H3Z4 198 aa18.14■□□□□ 0.49
PVT1-203ENST00000513868 MADDQ8WXG6 1647 aa18.14■□□□□ 0.49
PVT1-203ENST00000513868 NOS1P29475 1434 aa18.14■□□□□ 0.49
PVT1-203ENST00000513868 SYNMO15061 1565 aa18.13■□□□□ 0.49
PVT1-203ENST00000513868 CNTLNQ9NXG0 1405 aa18.13■□□□□ 0.49
PVT1-203ENST00000513868 PREX1Q8TCU6 1659 aa18.13■□□□□ 0.49
PVT1-203ENST00000513868 LAMC1P11047 1609 aa18.13■□□□□ 0.49
PVT1-203ENST00000513868 DDX10Q13206 875 aaKnown RBP18.12■□□□□ 0.49
PVT1-203ENST00000513868 CLTCQ00610 1675 aaKnown RBP18.11■□□□□ 0.49
PVT1-203ENST00000513868 ADGRB3O60242 1522 aa18.11■□□□□ 0.49
PVT1-203ENST00000513868 USP47Q96K76 1375 aa18.11■□□□□ 0.49
PVT1-203ENST00000513868 WASHC2AQ641Q2 1341 aa18.1■□□□□ 0.49
PVT1-203ENST00000513868 GPRASP1Q5JY77 1395 aa18.09■□□□□ 0.49
PVT1-203ENST00000513868 PPLO60437 1756 aa18.09■□□□□ 0.49
PVT1-203ENST00000513868 C11orf95C9JLR9 678 aaPredicted RBP18.09■□□□□ 0.49
PVT1-203ENST00000513868 KIAA1210Q9ULL0 1709 aa18.07■□□□□ 0.48
PVT1-203ENST00000513868 CARD11Q9BXL7 1154 aa18.07■□□□□ 0.48
PVT1-203ENST00000513868 PPP6R1Q9UPN7 881 aa18.07■□□□□ 0.48
PVT1-203ENST00000513868 ROCK2O75116 1388 aaKnown RBP18.07■□□□□ 0.48
PVT1-203ENST00000513868 MYO5BQ9ULV0 1848 aa18.07■□□□□ 0.48
PVT1-203ENST00000513868 NBPF1Q3BBV0 1214 aa18.06■□□□□ 0.48
PVT1-203ENST00000513868 STAC3Q96MF2 364 aa18.06■□□□□ 0.48
PVT1-203ENST00000513868 MYOM2P54296 1465 aa18.05■□□□□ 0.48
PVT1-203ENST00000513868 CCDC7Q96M83 1385 aa18.05■□□□□ 0.48
PVT1-203ENST00000513868 TRHP20396 242 aaPredicted RBP18.05■□□□□ 0.48
PVT1-203ENST00000513868 IQGAP1P46940 1657 aa18.03■□□□□ 0.48
PVT1-203ENST00000513868 NRXN1Q9ULB1 1477 aa18.02■□□□□ 0.47
PVT1-203ENST00000513868 ERVK-7P63135 1459 aa18■□□□□ 0.47
PVT1-203ENST00000513868 TMEM131LA2VDJ0 1609 aa18■□□□□ 0.47
PVT1-203ENST00000513868 KIF7Q2M1P5 1343 aa18■□□□□ 0.47
PVT1-203ENST00000513868 ST20-MTHFSA0A0A6YYL1 179 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms