RNA–Protein interactions for RNA: ENST00000513841.1

ARHGEF28-213, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 3

Gene ARHGEF28, Length 710 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-213ENST00000513841 MAST1Q9Y2H9 1570 aa17.78■□□□□ 0.44
ARHGEF28-213ENST00000513841 KIF15Q9NS87 1388 aa17.78■□□□□ 0.44
ARHGEF28-213ENST00000513841 CLTCQ00610 1675 aaKnown RBP17.77■□□□□ 0.44
ARHGEF28-213ENST00000513841 ILDR1Q86SU0 546 aaPredicted RBP17.77■□□□□ 0.44
ARHGEF28-213ENST00000513841 ANKRD30AQ9BXX3 1397 aa17.77■□□□□ 0.43
ARHGEF28-213ENST00000513841 PREX1Q8TCU6 1659 aa17.77■□□□□ 0.43
ARHGEF28-213ENST00000513841 MROH2AA6NES4 1674 aa17.75■□□□□ 0.43
ARHGEF28-213ENST00000513841 DUOX2Q9NRD8 1548 aa17.73■□□□□ 0.43
ARHGEF28-213ENST00000513841 NCOA1Q15788 1441 aa17.72■□□□□ 0.43
ARHGEF28-213ENST00000513841 SHANK2Q9UPX8 1470 aa17.72■□□□□ 0.43
ARHGEF28-213ENST00000513841 ITGAEP38570 1179 aa17.72■□□□□ 0.43
ARHGEF28-213ENST00000513841 NCKAP5LQ9HCH0 1330 aa17.71■□□□□ 0.42
ARHGEF28-213ENST00000513841 TNRQ92752 1358 aa17.7■□□□□ 0.42
ARHGEF28-213ENST00000513841 KDM5DQ9BY66 1539 aa17.69■□□□□ 0.42
ARHGEF28-213ENST00000513841 DNMT1P26358 1616 aaKnown RBP17.69■□□□□ 0.42
ARHGEF28-213ENST00000513841 PKD2Q13563 968 aa17.68■□□□□ 0.42
ARHGEF28-213ENST00000513841 THEMISQ8N1K5 641 aaPredicted RBP17.68■□□□□ 0.42
ARHGEF28-213ENST00000513841 ERBINQ96RT1 1412 aa17.68■□□□□ 0.42
ARHGEF28-213ENST00000513841 KANK1Q14678 1352 aa17.67■□□□□ 0.42
ARHGEF28-213ENST00000513841 PZPP20742 1482 aa17.67■□□□□ 0.42
ARHGEF28-213ENST00000513841 FAM135AQ9P2D6 1515 aa17.67■□□□□ 0.42
ARHGEF28-213ENST00000513841 CERKQ8TCT0 537 aa17.66■□□□□ 0.42
ARHGEF28-213ENST00000513841 FBXO41Q8TF61 875 aa17.65■□□□□ 0.42
ARHGEF28-213ENST00000513841 PTPRTO14522 1441 aa17.64■□□□□ 0.42
ARHGEF28-213ENST00000513841 EIF2AK4Q9P2K8 1649 aaKnown RBP17.64■□□□□ 0.41
ARHGEF28-213ENST00000513841 ABCC3O15438 1527 aa17.63■□□□□ 0.41
ARHGEF28-213ENST00000513841 CAMSAP1Q5T5Y3 1602 aa17.63■□□□□ 0.41
ARHGEF28-213ENST00000513841 ANKLE2Q86XL3 938 aa17.63■□□□□ 0.41
ARHGEF28-213ENST00000513841 STRCQ7RTU9 1775 aa17.63■□□□□ 0.41
ARHGEF28-213ENST00000513841 A2ML1A8K2U0 1454 aa17.63■□□□□ 0.41
ARHGEF28-213ENST00000513841 RNF17Q9BXT8 1623 aaKnown RBP17.62■□□□□ 0.41
ARHGEF28-213ENST00000513841 CROCC2H7BZ55 1655 aa17.61■□□□□ 0.41
ARHGEF28-213ENST00000513841 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.61■□□□□ 0.41
ARHGEF28-213ENST00000513841 ANKRD50Q9ULJ7 1429 aa17.61■□□□□ 0.41
ARHGEF28-213ENST00000513841 ADGRL2O95490 1459 aa17.61■□□□□ 0.41
ARHGEF28-213ENST00000513841 CEP170BQ9Y4F5 1589 aaPredicted RBP17.59■□□□□ 0.41
ARHGEF28-213ENST00000513841 ROCK1Q13464 1354 aa17.58■□□□□ 0.4
ARHGEF28-213ENST00000513841 MROH1Q8NDA8 1641 aa17.58■□□□□ 0.4
ARHGEF28-213ENST00000513841 NLRP1Q9C000 1473 aa17.57■□□□□ 0.4
ARHGEF28-213ENST00000513841 ARHGAP31Q2M1Z3 1444 aa17.57■□□□□ 0.4
ARHGEF28-213ENST00000513841 STAG3Q9UJ98 1225 aa17.57■□□□□ 0.4
ARHGEF28-213ENST00000513841 MYO3AQ8NEV4 1616 aa17.57■□□□□ 0.4
ARHGEF28-213ENST00000513841 PLA2R1Q13018 1463 aa17.56■□□□□ 0.4
ARHGEF28-213ENST00000513841 CFAP65Q6ZU64 1925 aaKnown RBP17.56■□□□□ 0.4
ARHGEF28-213ENST00000513841 ERVK-7P63135 1459 aa17.55■□□□□ 0.4
ARHGEF28-213ENST00000513841 ZC3H13Q5T200 1668 aaKnown RBP17.55■□□□□ 0.4
ARHGEF28-213ENST00000513841 IDI1Q13907 227 aa17.54■□□□□ 0.4
ARHGEF28-213ENST00000513841 PRDM15P57071 1507 aaPredicted RBP17.53■□□□□ 0.4
ARHGEF28-213ENST00000513841 UGGT1Q9NYU2 1555 aa17.53■□□□□ 0.4
ARHGEF28-213ENST00000513841 TXNDC2Q86VQ3 553 aa17.52■□□□□ 0.4
ARHGEF28-213ENST00000513841 SPATA31D1Q6ZQQ2 1576 aa17.52■□□□□ 0.39
ARHGEF28-213ENST00000513841 CEP152O94986 1710 aa17.52■□□□□ 0.39
ARHGEF28-213ENST00000513841 ZNF142P52746 1687 aaPredicted RBP17.52■□□□□ 0.39
ARHGEF28-213ENST00000513841 ZNF335Q9H4Z2 1342 aaPredicted RBP17.51■□□□□ 0.39
ARHGEF28-213ENST00000513841 SLC52A1Q9NWF4 448 aa17.51■□□□□ 0.39
ARHGEF28-213ENST00000513841 RRBP1Q9P2E9 1410 aaKnown RBP17.5■□□□□ 0.39
ARHGEF28-213ENST00000513841 EID1Q9Y6B2 187 aa17.5■□□□□ 0.39
ARHGEF28-213ENST00000513841 NUP155O75694 1391 aa17.5■□□□□ 0.39
ARHGEF28-213ENST00000513841 DEPDC5O75140 1603 aa17.49■□□□□ 0.39
ARHGEF28-213ENST00000513841 LMTK2Q8IWU2 1503 aa17.48■□□□□ 0.39
ARHGEF28-213ENST00000513841 LTKP29376 864 aa17.48■□□□□ 0.39
ARHGEF28-213ENST00000513841 VWDEQ8N2E2 1590 aa17.47■□□□□ 0.39
ARHGEF28-213ENST00000513841 NPHP4O75161 1426 aaPredicted RBP17.45■□□□□ 0.38
ARHGEF28-213ENST00000513841 NOS1P29475 1434 aa17.44■□□□□ 0.38
ARHGEF28-213ENST00000513841 LTBP4Q8N2S1 1624 aa17.43■□□□□ 0.38
ARHGEF28-213ENST00000513841 CHGAP10645 457 aaKnown RBP17.43■□□□□ 0.38
ARHGEF28-213ENST00000513841 HDGFP51858 240 aaKnown RBP17.42■□□□□ 0.38
ARHGEF28-213ENST00000513841 TRIM52Q96A61 297 aa17.42■□□□□ 0.38
ARHGEF28-213ENST00000513841 TMEM2Q9UHN6 1383 aa17.41■□□□□ 0.38
ARHGEF28-213ENST00000513841 MED14O60244 1454 aa17.41■□□□□ 0.38
ARHGEF28-213ENST00000513841 RPRD2Q5VT52 1461 aaKnown RBP17.41■□□□□ 0.38
ARHGEF28-213ENST00000513841 BCANQ96GW7 911 aa17.4■□□□□ 0.38
ARHGEF28-213ENST00000513841 EFCAB6Q5THR3 1501 aa17.4■□□□□ 0.38
ARHGEF28-213ENST00000513841 UBAP1LF5GYI3 381 aa17.38■□□□□ 0.37
ARHGEF28-213ENST00000513841 NAIPQ13075 1403 aa17.38■□□□□ 0.37
ARHGEF28-213ENST00000513841 SCAF11Q99590 1463 aaKnown RBP17.37■□□□□ 0.37
ARHGEF28-213ENST00000513841 NEURL4Q96JN8 1562 aa17.37■□□□□ 0.37
ARHGEF28-213ENST00000513841 ARHGAP23Q9P227 1491 aa17.37■□□□□ 0.37
ARHGEF28-213ENST00000513841 UBR1Q8IWV7 1749 aa17.36■□□□□ 0.37
ARHGEF28-213ENST00000513841 UNC13BO14795 1591 aa17.36■□□□□ 0.37
ARHGEF28-213ENST00000513841 PIK3C2BO00750 1634 aa17.36■□□□□ 0.37
ARHGEF28-213ENST00000513841 SLC26A8Q96RN1 970 aa17.35■□□□□ 0.37
ARHGEF28-213ENST00000513841 SLIT1O75093 1534 aa17.35■□□□□ 0.37
ARHGEF28-213ENST00000513841 TET3O43151 1660 aa17.35■□□□□ 0.37
ARHGEF28-213ENST00000513841 SYNMO15061 1565 aa17.34■□□□□ 0.37
ARHGEF28-213ENST00000513841 PPP1R15AO75807 674 aaPredicted RBP17.34■□□□□ 0.37
ARHGEF28-213ENST00000513841 POLR1AO95602 1720 aaPredicted RBP17.34■□□□□ 0.37
ARHGEF28-213ENST00000513841 IQSEC2Q5JU85 1478 aa17.34■□□□□ 0.37
ARHGEF28-213ENST00000513841 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.34■□□□□ 0.37
ARHGEF28-213ENST00000513841 SENP3Q9H4L4 574 aaPredicted RBP17.34■□□□□ 0.37
ARHGEF28-213ENST00000513841 SLC4A1APQ9BWU0 796 aaKnown RBP17.33■□□□□ 0.36
ARHGEF28-213ENST00000513841 TOM1O60784 492 aa17.32■□□□□ 0.36
ARHGEF28-213ENST00000513841 HFM1A2PYH4 1435 aa17.31■□□□□ 0.36
ARHGEF28-213ENST00000513841 NUTM2DQ5VT03 806 aaPredicted RBP17.31■□□□□ 0.36
ARHGEF28-213ENST00000513841 IQGAP3Q86VI3 1631 aa17.31■□□□□ 0.36
ARHGEF28-213ENST00000513841 KCNA6P17658 529 aa17.29■□□□□ 0.36
ARHGEF28-213ENST00000513841 ZNF326Q5BKZ1 582 aaKnown RBP17.29■□□□□ 0.36
ARHGEF28-213ENST00000513841 CPS1P31327 1500 aa17.29■□□□□ 0.36
ARHGEF28-213ENST00000513841 IQGAP1P46940 1657 aa17.29■□□□□ 0.36
ARHGEF28-213ENST00000513841 GCC2Q8IWJ2 1684 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms