RNA–Protein interactions for RNA: ENST00000513785.5

SSBP2-217, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 746 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-217ENST00000513785 WDR70Q9NW82 654 aa12.92□□□□□ -0.34
SSBP2-217ENST00000513785 HCSTQ9UBK5 93 aa12.91□□□□□ -0.34
SSBP2-217ENST00000513785 PDIA6Q15084 440 aa12.9□□□□□ -0.34
SSBP2-217ENST00000513785 PPP1R3GB7ZBB8 358 aa12.89□□□□□ -0.35
SSBP2-217ENST00000513785 PROX2Q3B8N5 592 aa12.89□□□□□ -0.35
SSBP2-217ENST00000513785 C6orf132Q5T0Z8 1188 aa12.89□□□□□ -0.35
SSBP2-217ENST00000513785 RBM33Q96EV2 1170 aaKnown RBP12.89□□□□□ -0.35
SSBP2-217ENST00000513785 EPAS1Q99814 870 aa12.89□□□□□ -0.35
SSBP2-217ENST00000513785 SPDYE16A6NNV3 312 aaPredicted RBP12.85□□□□□ -0.35
SSBP2-217ENST00000513785 ARIH1Q9Y4X5 557 aaPredicted RBP12.85□□□□□ -0.35
SSBP2-217ENST00000513785 MRPL50Q8N5N7 158 aaKnown RBP12.84□□□□□ -0.35
SSBP2-217ENST00000513785 NBR1Q14596 966 aa12.83□□□□□ -0.36
SSBP2-217ENST00000513785 PTPN5P54829 565 aa12.81□□□□□ -0.36
SSBP2-217ENST00000513785 RABGEF1Q9UJ41 708 aa12.81□□□□□ -0.36
SSBP2-217ENST00000513785 PRIM1P49642 420 aaKnown RBP12.8□□□□□ -0.36
SSBP2-217ENST00000513785 TSR1Q2NL82 804 aaKnown RBP12.8□□□□□ -0.36
SSBP2-217ENST00000513785 EN1Q05925 392 aaPredicted RBP12.79□□□□□ -0.36
SSBP2-217ENST00000513785 NBPF3Q9H094 633 aa12.79□□□□□ -0.36
SSBP2-217ENST00000513785 KIAA1468Q9P260 1216 aa12.79□□□□□ -0.36
SSBP2-217ENST00000513785 GRXCR2A6NFK2 248 aa12.78□□□□□ -0.36
SSBP2-217ENST00000513785 GOLGA8CPA6NN73 597 aa12.78□□□□□ -0.36
SSBP2-217ENST00000513785 MAP3K7O43318 606 aa12.78□□□□□ -0.36
SSBP2-217ENST00000513785 WNT2BQ93097 391 aa12.78□□□□□ -0.36
SSBP2-217ENST00000513785 THSD4Q6ZMP0 1018 aa12.77□□□□□ -0.37
SSBP2-217ENST00000513785 PLA2G2EQ9NZK7 142 aa12.77□□□□□ -0.37
SSBP2-217ENST00000513785 TRIM6-TRIM34B2RNG4 842 aa12.73□□□□□ -0.37
SSBP2-217ENST00000513785 ONECUT3O60422 494 aaPredicted RBP12.72□□□□□ -0.37
SSBP2-217ENST00000513785 OSBPP22059 807 aa12.72□□□□□ -0.37
SSBP2-217ENST00000513785 SEPT9Q9UHD8 586 aaPredicted RBP12.72□□□□□ -0.37
SSBP2-217ENST00000513785 TSKSQ9UJT2 592 aa12.7□□□□□ -0.38
SSBP2-217ENST00000513785 KCNV2Q8TDN2 545 aa12.69□□□□□ -0.38
SSBP2-217ENST00000513785 LAPTM4BQ86VI4 370 aa12.68□□□□□ -0.38
SSBP2-217ENST00000513785 ZFRQ96KR1 1074 aaKnown RBP12.67□□□□□ -0.38
SSBP2-217ENST00000513785 BCAMP50895 628 aa12.66□□□□□ -0.38
SSBP2-217ENST00000513785 ANKK1Q8NFD2 765 aa12.66□□□□□ -0.38
SSBP2-217ENST00000513785 CDHR5Q9HBB8 845 aa12.66□□□□□ -0.38
SSBP2-217ENST00000513785 ARHGEF1Q92888 912 aaKnown RBP12.65□□□□□ -0.38
SSBP2-217ENST00000513785 CDCA7LQ96GN5 454 aa12.65□□□□□ -0.38
SSBP2-217ENST00000513785 FAM198AQ9UFP1 575 aa12.65□□□□□ -0.38
SSBP2-217ENST00000513785 C3orf80F5H4A9 247 aa12.63□□□□□ -0.39
SSBP2-217ENST00000513785 MLLT3P42568 568 aaPredicted RBP12.63□□□□□ -0.39
SSBP2-217ENST00000513785 PRSS12P56730 875 aa12.63□□□□□ -0.39
SSBP2-217ENST00000513785 PLCB2Q00722 1185 aa12.63□□□□□ -0.39
SSBP2-217ENST00000513785 SOWAHBA6NEL2 793 aa12.62□□□□□ -0.39
SSBP2-217ENST00000513785 FAM98CQ17RN3 349 aaKnown RBP12.62□□□□□ -0.39
SSBP2-217ENST00000513785 PACS2Q86VP3 889 aa12.62□□□□□ -0.39
SSBP2-217ENST00000513785 SMAPO00193 183 aa12.61□□□□□ -0.39
SSBP2-217ENST00000513785 CERKQ8TCT0 537 aa12.59□□□□□ -0.39
SSBP2-217ENST00000513785 NPDC1Q9NQX5 325 aaPredicted RBP12.59□□□□□ -0.39
SSBP2-217ENST00000513785 WBP1LQ9NX94 342 aa12.57□□□□□ -0.4
SSBP2-217ENST00000513785 TATDN2Q93075 761 aa12.54□□□□□ -0.4
SSBP2-217ENST00000513785 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.54□□□□□ -0.4
SSBP2-217ENST00000513785 LRCH3Q96II8 777 aa12.53□□□□□ -0.4
SSBP2-217ENST00000513785 PNMA3Q9UL41 463 aa12.52□□□□□ -0.41
SSBP2-217ENST00000513785 NUDT18Q6ZVK8 323 aa12.51□□□□□ -0.41
SSBP2-217ENST00000513785 TTC13Q8NBP0 860 aa12.51□□□□□ -0.41
SSBP2-217ENST00000513785 HPS5Q9UPZ3 1129 aa12.51□□□□□ -0.41
SSBP2-217ENST00000513785 PADI6Q6TGC4 694 aa12.5□□□□□ -0.41
SSBP2-217ENST00000513785 SAMD7Q7Z3H4 446 aa12.5□□□□□ -0.41
SSBP2-217ENST00000513785 TSR3Q9UJK0 312 aaKnown RBP12.5□□□□□ -0.41
SSBP2-217ENST00000513785 NBPF26B4DH59 902 aa12.49□□□□□ -0.41
SSBP2-217ENST00000513785 SEMA3EO15041 775 aa12.49□□□□□ -0.41
SSBP2-217ENST00000513785 IFFO2Q5TF58 517 aa12.49□□□□□ -0.41
SSBP2-217ENST00000513785 P3H3Q8IVL6 736 aa12.49□□□□□ -0.41
SSBP2-217ENST00000513785 RBM27Q9P2N5 1060 aaKnown RBP12.49□□□□□ -0.41
SSBP2-217ENST00000513785 NYAP1Q6ZVC0 841 aa12.46□□□□□ -0.41
SSBP2-217ENST00000513785 ITGBL1O95965 494 aaPredicted RBP12.45□□□□□ -0.42
SSBP2-217ENST00000513785 HAP1P54257 671 aaPredicted RBP12.44□□□□□ -0.42
SSBP2-217ENST00000513785 PPP4CP60510 307 aa12.43□□□□□ -0.42
SSBP2-217ENST00000513785 PTGDRQ13258 359 aa12.43□□□□□ -0.42
SSBP2-217ENST00000513785 A0A0G2JS52 829 aa12.41□□□□□ -0.42
SSBP2-217ENST00000513785 NUTM2FA1L443 756 aa12.41□□□□□ -0.42
SSBP2-217ENST00000513785 KDM2AQ9Y2K7 1162 aa12.41□□□□□ -0.42
SSBP2-217ENST00000513785 EYA1Q99502 592 aa12.4□□□□□ -0.42
SSBP2-217ENST00000513785 SWT1Q5T5J6 900 aaKnown RBP12.37□□□□□ -0.43
SSBP2-217ENST00000513785 RNF40O75150 1001 aa12.36□□□□□ -0.43
SSBP2-217ENST00000513785 KCNC4Q03721 635 aa12.36□□□□□ -0.43
SSBP2-217ENST00000513785 TESPA1A2RU30 521 aaPredicted RBP12.35□□□□□ -0.43
SSBP2-217ENST00000513785 HDGFP51858 240 aaKnown RBP12.35□□□□□ -0.43
SSBP2-217ENST00000513785 FAM161AQ3B820 660 aa12.35□□□□□ -0.43
SSBP2-217ENST00000513785 TJAP1Q5JTD0 557 aa12.33□□□□□ -0.44
SSBP2-217ENST00000513785 RBM26Q5T8P6 1007 aaKnown RBP12.33□□□□□ -0.44
SSBP2-217ENST00000513785 ADGRG1Q9Y653 693 aa12.32□□□□□ -0.44
SSBP2-217ENST00000513785 APLP1P51693 650 aa12.31□□□□□ -0.44
SSBP2-217ENST00000513785 FCHSD2O94868 740 aa12.3□□□□□ -0.44
SSBP2-217ENST00000513785 RGS20O76081 388 aa12.29□□□□□ -0.44
SSBP2-217ENST00000513785 MTRQ99707 1265 aa12.28□□□□□ -0.44
SSBP2-217ENST00000513785 SLF2Q8IX21 1173 aa12.27□□□□□ -0.45
SSBP2-217ENST00000513785 RBM46Q8TBY0 533 aaKnown RBP12.26□□□□□ -0.45
SSBP2-217ENST00000513785 ZNF516Q92618 1163 aa12.26□□□□□ -0.45
SSBP2-217ENST00000513785 RCCD1A6NED2 376 aa12.24□□□□□ -0.45
SSBP2-217ENST00000513785 DNAJB2P25686 324 aa12.24□□□□□ -0.45
SSBP2-217ENST00000513785 SMYD5Q6GMV2 418 aa12.24□□□□□ -0.45
SSBP2-217ENST00000513785 TMEM134Q9H6X4 195 aa12.24□□□□□ -0.45
SSBP2-217ENST00000513785 FECHP22830 423 aa12.23□□□□□ -0.45
SSBP2-217ENST00000513785 IL21Q9HBE4 155 aa12.23□□□□□ -0.45
SSBP2-217ENST00000513785 GPR37O15354 613 aa12.21□□□□□ -0.45
SSBP2-217ENST00000513785 HIC1Q14526 733 aa12.21□□□□□ -0.45
SSBP2-217ENST00000513785 COPS2P61201 443 aa12.2□□□□□ -0.46
SSBP2-217ENST00000513785 SLC4A3P48751 1232 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms