RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 THEMISQ8N1K5 641 aaPredicted RBP11.31□□□□□ -0.6
HTT-212ENST00000513639 ARHGEF5Q12774 1597 aa11.31□□□□□ -0.6
HTT-212ENST00000513639 NCKAP5LQ9HCH0 1330 aa11.3□□□□□ -0.6
HTT-212ENST00000513639 RRP7BPQ9NSQ0 103 aa11.29□□□□□ -0.6
HTT-212ENST00000513639 MROH2AA6NES4 1674 aa11.29□□□□□ -0.6
HTT-212ENST00000513639 NCOA1Q15788 1441 aa11.28□□□□□ -0.6
HTT-212ENST00000513639 ANKLE2Q86XL3 938 aa11.28□□□□□ -0.6
HTT-212ENST00000513639 TNRQ92752 1358 aa11.28□□□□□ -0.6
HTT-212ENST00000513639 FAM135AQ9P2D6 1515 aa11.26□□□□□ -0.61
HTT-212ENST00000513639 CLTCQ00610 1675 aaKnown RBP11.26□□□□□ -0.61
HTT-212ENST00000513639 FAM50AQ14320 339 aaKnown RBP11.25□□□□□ -0.61
HTT-212ENST00000513639 CHIC2Q9UKJ5 165 aa11.25□□□□□ -0.61
HTT-212ENST00000513639 ANKRD30AQ9BXX3 1397 aa11.25□□□□□ -0.61
HTT-212ENST00000513639 ABCC5O15440 1437 aa11.25□□□□□ -0.61
HTT-212ENST00000513639 PZPP20742 1482 aa11.25□□□□□ -0.61
HTT-212ENST00000513639 STRCQ7RTU9 1775 aa11.24□□□□□ -0.61
HTT-212ENST00000513639 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.24□□□□□ -0.61
HTT-212ENST00000513639 KIF15Q9NS87 1388 aa11.24□□□□□ -0.61
HTT-212ENST00000513639 FGD6Q6ZV73 1430 aa11.24□□□□□ -0.61
HTT-212ENST00000513639 A2ML1A8K2U0 1454 aa11.24□□□□□ -0.61
HTT-212ENST00000513639 PLA2R1Q13018 1463 aa11.24□□□□□ -0.61
HTT-212ENST00000513639 KDM5DQ9BY66 1539 aa11.24□□□□□ -0.61
HTT-212ENST00000513639 MAST1Q9Y2H9 1570 aa11.24□□□□□ -0.61
HTT-212ENST00000513639 CAMSAP1Q5T5Y3 1602 aa11.24□□□□□ -0.61
HTT-212ENST00000513639 KANK1Q14678 1352 aa11.23□□□□□ -0.61
HTT-212ENST00000513639 DUOX2Q9NRD8 1548 aa11.23□□□□□ -0.61
HTT-212ENST00000513639 NLRP1Q9C000 1473 aa11.21□□□□□ -0.61
HTT-212ENST00000513639 DAPK1P53355 1430 aa11.21□□□□□ -0.61
HTT-212ENST00000513639 CEP170BQ9Y4F5 1589 aaPredicted RBP11.2□□□□□ -0.62
HTT-212ENST00000513639 TCOF1Q13428 1488 aaKnown RBP11.2□□□□□ -0.62
HTT-212ENST00000513639 SHANK2Q9UPX8 1470 aa11.2□□□□□ -0.62
HTT-212ENST00000513639 ERBINQ96RT1 1412 aa11.2□□□□□ -0.62
HTT-212ENST00000513639 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.19□□□□□ -0.62
HTT-212ENST00000513639 ZNF335Q9H4Z2 1342 aaPredicted RBP11.19□□□□□ -0.62
HTT-212ENST00000513639 STAG3Q9UJ98 1225 aa11.19□□□□□ -0.62
HTT-212ENST00000513639 PTPN23Q9H3S7 1636 aa11.19□□□□□ -0.62
HTT-212ENST00000513639 EID1Q9Y6B2 187 aa11.18□□□□□ -0.62
HTT-212ENST00000513639 ARHGAP31Q2M1Z3 1444 aa11.18□□□□□ -0.62
HTT-212ENST00000513639 UBAP1LF5GYI3 381 aa11.17□□□□□ -0.62
HTT-212ENST00000513639 ABCC3O15438 1527 aa11.17□□□□□ -0.62
HTT-212ENST00000513639 IQSEC2Q5JU85 1478 aa11.17□□□□□ -0.62
HTT-212ENST00000513639 DNMT1P26358 1616 aaKnown RBP11.17□□□□□ -0.62
HTT-212ENST00000513639 MYO3AQ8NEV4 1616 aa11.17□□□□□ -0.62
HTT-212ENST00000513639 EIF2AK4Q9P2K8 1649 aaKnown RBP11.17□□□□□ -0.62
HTT-212ENST00000513639 TXNDC2Q86VQ3 553 aa11.16□□□□□ -0.62
HTT-212ENST00000513639 SLC52A1Q9NWF4 448 aa11.16□□□□□ -0.62
HTT-212ENST00000513639 RNF17Q9BXT8 1623 aaKnown RBP11.16□□□□□ -0.62
HTT-212ENST00000513639 UGGT1Q9NYU2 1555 aa11.16□□□□□ -0.62
HTT-212ENST00000513639 TOM1O60784 492 aa11.15□□□□□ -0.62
HTT-212ENST00000513639 KCNA4P22459 653 aa11.15□□□□□ -0.62
HTT-212ENST00000513639 LTBP4Q8N2S1 1624 aa11.15□□□□□ -0.62
HTT-212ENST00000513639 ZNF142P52746 1687 aaPredicted RBP11.14□□□□□ -0.63
HTT-212ENST00000513639 HDGFP51858 240 aaKnown RBP11.14□□□□□ -0.63
HTT-212ENST00000513639 IDI1Q13907 227 aa11.14□□□□□ -0.63
HTT-212ENST00000513639 ERVK-7P63135 1459 aa11.13□□□□□ -0.63
HTT-212ENST00000513639 ANKRD50Q9ULJ7 1429 aa11.13□□□□□ -0.63
HTT-212ENST00000513639 NPHP4O75161 1426 aaPredicted RBP11.12□□□□□ -0.63
HTT-212ENST00000513639 ZC3H13Q5T200 1668 aaKnown RBP11.12□□□□□ -0.63
HTT-212ENST00000513639 MED14O60244 1454 aa11.12□□□□□ -0.63
HTT-212ENST00000513639 SPATA31D1Q6ZQQ2 1576 aa11.11□□□□□ -0.63
HTT-212ENST00000513639 LTKP29376 864 aa11.11□□□□□ -0.63
HTT-212ENST00000513639 ITGAEP38570 1179 aa11.11□□□□□ -0.63
HTT-212ENST00000513639 PPARGC1BQ86YN6 1023 aaKnown RBP11.11□□□□□ -0.63
HTT-212ENST00000513639 ROCK1Q13464 1354 aa11.11□□□□□ -0.63
HTT-212ENST00000513639 ADGRL2O95490 1459 aa11.11□□□□□ -0.63
HTT-212ENST00000513639 PRDM15P57071 1507 aaPredicted RBP11.09□□□□□ -0.63
HTT-212ENST00000513639 MROH1Q8NDA8 1641 aa11.09□□□□□ -0.63
HTT-212ENST00000513639 LMTK2Q8IWU2 1503 aa11.09□□□□□ -0.63
HTT-212ENST00000513639 TMEM2Q9UHN6 1383 aa11.08□□□□□ -0.64
HTT-212ENST00000513639 CPS1P31327 1500 aa11.08□□□□□ -0.64
HTT-212ENST00000513639 CFAP65Q6ZU64 1925 aaKnown RBP11.07□□□□□ -0.64
HTT-212ENST00000513639 PIP4K2BP78356 416 aa11.07□□□□□ -0.64
HTT-212ENST00000513639 PPP4R3CPQ6ZMV5 832 aa11.07□□□□□ -0.64
HTT-212ENST00000513639 BCANQ96GW7 911 aa11.07□□□□□ -0.64
HTT-212ENST00000513639 CROCC2H7BZ55 1655 aa11.07□□□□□ -0.64
HTT-212ENST00000513639 SCAF1Q9H7N4 1312 aaKnown RBP11.07□□□□□ -0.64
HTT-212ENST00000513639 DEPDC5O75140 1603 aa11.06□□□□□ -0.64
HTT-212ENST00000513639 SCAF11Q99590 1463 aaKnown RBP11.06□□□□□ -0.64
HTT-212ENST00000513639 NUP155O75694 1391 aa11.05□□□□□ -0.64
HTT-212ENST00000513639 NOS1P29475 1434 aa11.05□□□□□ -0.64
HTT-212ENST00000513639 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.05□□□□□ -0.64
HTT-212ENST00000513639 RPRD2Q5VT52 1461 aaKnown RBP11.05□□□□□ -0.64
HTT-212ENST00000513639 ARHGAP23Q9P227 1491 aa11.05□□□□□ -0.64
HTT-212ENST00000513639 SLIT1O75093 1534 aa11.04□□□□□ -0.64
HTT-212ENST00000513639 VWDEQ8N2E2 1590 aa11.04□□□□□ -0.64
HTT-212ENST00000513639 NEURL4Q96JN8 1562 aa11.04□□□□□ -0.64
HTT-212ENST00000513639 PPP1R15AO75807 674 aaPredicted RBP11.04□□□□□ -0.64
HTT-212ENST00000513639 KCNA6P17658 529 aa11.04□□□□□ -0.64
HTT-212ENST00000513639 CEP152O94986 1710 aa11.04□□□□□ -0.64
HTT-212ENST00000513639 DISP3Q9P2K9 1392 aa11.03□□□□□ -0.64
HTT-212ENST00000513639 CHGAP10645 457 aaKnown RBP11.03□□□□□ -0.64
HTT-212ENST00000513639 SLC26A8Q96RN1 970 aa11.03□□□□□ -0.64
HTT-212ENST00000513639 POLR1AO95602 1720 aaPredicted RBP11.02□□□□□ -0.65
HTT-212ENST00000513639 PROSER2Q86WR7 435 aaPredicted RBP11.02□□□□□ -0.65
HTT-212ENST00000513639 EFCAB6Q5THR3 1501 aa11.01□□□□□ -0.65
HTT-212ENST00000513639 HSPA1LP34931 641 aa11.01□□□□□ -0.65
HTT-212ENST00000513639 UBR1Q8IWV7 1749 aa11.01□□□□□ -0.65
HTT-212ENST00000513639 TBX22Q9Y458 520 aa11□□□□□ -0.65
HTT-212ENST00000513639 IQGAP1P46940 1657 aa11□□□□□ -0.65
HTT-212ENST00000513639 LRRC7Q96NW7 1537 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms