RNA–Protein interactions for RNA: ENST00000513598.5

CTNND2-216, Transcript of catenin delta 2, humanhuman

TSL 3

Gene CTNND2, Length 720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-216ENST00000513598 WASHC2CQ9Y4E1 1318 aa34.82■■■■□ 3.17
CTNND2-216ENST00000513598 ZNF142P52746 1687 aaPredicted RBP34.82■■■■□ 3.16
CTNND2-216ENST00000513598 CEP170BQ9Y4F5 1589 aaPredicted RBP34.81■■■■□ 3.16
CTNND2-216ENST00000513598 APLP2Q06481 763 aa34.8■■■■□ 3.16
CTNND2-216ENST00000513598 MAST1Q9Y2H9 1570 aa34.79■■■■□ 3.16
CTNND2-216ENST00000513598 KDM5DQ9BY66 1539 aa34.77■■■■□ 3.16
CTNND2-216ENST00000513598 LTBP4Q8N2S1 1624 aa34.75■■■■□ 3.15
CTNND2-216ENST00000513598 TNRQ92752 1358 aa34.73■■■■□ 3.15
CTNND2-216ENST00000513598 A2ML1A8K2U0 1454 aa34.72■■■■□ 3.15
CTNND2-216ENST00000513598 PZPP20742 1482 aa34.72■■■■□ 3.15
CTNND2-216ENST00000513598 PKD2Q13563 968 aa34.72■■■■□ 3.15
CTNND2-216ENST00000513598 PLA2R1Q13018 1463 aa34.71■■■■□ 3.15
CTNND2-216ENST00000513598 DNMT1P26358 1616 aaKnown RBP34.71■■■■□ 3.15
CTNND2-216ENST00000513598 TCOF1Q13428 1488 aaKnown RBP34.7■■■■□ 3.15
CTNND2-216ENST00000513598 FAM135AQ9P2D6 1515 aa34.69■■■■□ 3.14
CTNND2-216ENST00000513598 RNF17Q9BXT8 1623 aaKnown RBP34.66■■■■□ 3.14
CTNND2-216ENST00000513598 PTPN23Q9H3S7 1636 aa34.66■■■■□ 3.14
CTNND2-216ENST00000513598 ABCC5O15440 1437 aa34.66■■■■□ 3.14
CTNND2-216ENST00000513598 ZNF335Q9H4Z2 1342 aaPredicted RBP34.66■■■■□ 3.14
CTNND2-216ENST00000513598 RRP7BPQ9NSQ0 103 aa34.62■■■■□ 3.13
CTNND2-216ENST00000513598 ABCC3O15438 1527 aa34.61■■■■□ 3.13
CTNND2-216ENST00000513598 CFAP65Q6ZU64 1925 aaKnown RBP34.61■■■■□ 3.13
CTNND2-216ENST00000513598 MROH1Q8NDA8 1641 aa34.6■■■■□ 3.13
CTNND2-216ENST00000513598 EIF2AK4Q9P2K8 1649 aaKnown RBP34.6■■■■□ 3.13
CTNND2-216ENST00000513598 FGD6Q6ZV73 1430 aa34.59■■■■□ 3.13
CTNND2-216ENST00000513598 DUOX2Q9NRD8 1548 aa34.59■■■■□ 3.13
CTNND2-216ENST00000513598 KIF15Q9NS87 1388 aa34.57■■■■□ 3.12
CTNND2-216ENST00000513598 CROCC2H7BZ55 1655 aa34.57■■■■□ 3.12
CTNND2-216ENST00000513598 DAPK1P53355 1430 aa34.55■■■■□ 3.12
CTNND2-216ENST00000513598 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.55■■■■□ 3.12
CTNND2-216ENST00000513598 CHIC2Q9UKJ5 165 aa34.55■■■■□ 3.12
CTNND2-216ENST00000513598 CEP152O94986 1710 aa34.54■■■■□ 3.12
CTNND2-216ENST00000513598 SHANK2Q9UPX8 1470 aa34.53■■■■□ 3.12
CTNND2-216ENST00000513598 ZC3H13Q5T200 1668 aaKnown RBP34.52■■■■□ 3.12
CTNND2-216ENST00000513598 THEMISQ8N1K5 641 aaPredicted RBP34.52■■■■□ 3.12
CTNND2-216ENST00000513598 NLRP1Q9C000 1473 aa34.52■■■■□ 3.12
CTNND2-216ENST00000513598 NEURL4Q96JN8 1562 aa34.49■■■■□ 3.11
CTNND2-216ENST00000513598 POLR1AO95602 1720 aaPredicted RBP34.49■■■■□ 3.11
CTNND2-216ENST00000513598 UGGT1Q9NYU2 1555 aa34.49■■■■□ 3.11
CTNND2-216ENST00000513598 IQSEC2Q5JU85 1478 aa34.48■■■■□ 3.11
CTNND2-216ENST00000513598 ANKLE2Q86XL3 938 aa34.48■■■■□ 3.11
CTNND2-216ENST00000513598 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.48■■■■□ 3.11
CTNND2-216ENST00000513598 SPATA31D1Q6ZQQ2 1576 aa34.48■■■■□ 3.11
CTNND2-216ENST00000513598 ERVK-7P63135 1459 aa34.46■■■■□ 3.11
CTNND2-216ENST00000513598 ERBINQ96RT1 1412 aa34.45■■■■□ 3.11
CTNND2-216ENST00000513598 PRDM15P57071 1507 aaPredicted RBP34.4■■■■□ 3.1
CTNND2-216ENST00000513598 ANKRD30AQ9BXX3 1397 aa34.39■■■■□ 3.1
CTNND2-216ENST00000513598 FAM50AQ14320 339 aaKnown RBP34.39■■■■□ 3.1
CTNND2-216ENST00000513598 UBAP1LF5GYI3 381 aa34.37■■■■□ 3.09
CTNND2-216ENST00000513598 NPHP4O75161 1426 aaPredicted RBP34.35■■■■□ 3.09
CTNND2-216ENST00000513598 DEPDC5O75140 1603 aa34.34■■■■□ 3.09
CTNND2-216ENST00000513598 ARHGAP31Q2M1Z3 1444 aa34.34■■■■□ 3.09
CTNND2-216ENST00000513598 MED14O60244 1454 aa34.33■■■■□ 3.09
CTNND2-216ENST00000513598 UBR1Q8IWV7 1749 aa34.3■■■■□ 3.08
CTNND2-216ENST00000513598 KANK1Q14678 1352 aa34.29■■■■□ 3.08
CTNND2-216ENST00000513598 VWDEQ8N2E2 1590 aa34.28■■■■□ 3.08
CTNND2-216ENST00000513598 ADGRL2O95490 1459 aa34.27■■■■□ 3.08
CTNND2-216ENST00000513598 IQGAP1P46940 1657 aa34.25■■■■□ 3.07
CTNND2-216ENST00000513598 LTKP29376 864 aa34.24■■■■□ 3.07
CTNND2-216ENST00000513598 CPS1P31327 1500 aa34.22■■■■□ 3.07
CTNND2-216ENST00000513598 PPARGC1BQ86YN6 1023 aaKnown RBP34.21■■■■□ 3.07
CTNND2-216ENST00000513598 LMTK2Q8IWU2 1503 aa34.2■■■■□ 3.07
CTNND2-216ENST00000513598 TXNDC2Q86VQ3 553 aa34.2■■■■□ 3.07
CTNND2-216ENST00000513598 IDI1Q13907 227 aa34.18■■■■□ 3.06
CTNND2-216ENST00000513598 DISP3Q9P2K9 1392 aa34.18■■■■□ 3.06
CTNND2-216ENST00000513598 PIK3C2BO00750 1634 aa34.18■■■■□ 3.06
CTNND2-216ENST00000513598 STRCP1A6NGW2 1772 aa34.18■■■■□ 3.06
CTNND2-216ENST00000513598 ARHGAP23Q9P227 1491 aa34.17■■■■□ 3.06
CTNND2-216ENST00000513598 ANKRD50Q9ULJ7 1429 aa34.16■■■■□ 3.06
CTNND2-216ENST00000513598 SCAF11Q99590 1463 aaKnown RBP34.15■■■■□ 3.06
CTNND2-216ENST00000513598 SLIT1O75093 1534 aa34.14■■■■□ 3.06
CTNND2-216ENST00000513598 PIP4K2BP78356 416 aa34.14■■■■□ 3.06
CTNND2-216ENST00000513598 STAG3Q9UJ98 1225 aa34.13■■■■□ 3.05
CTNND2-216ENST00000513598 SCAF1Q9H7N4 1312 aaKnown RBP34.11■■■■□ 3.05
CTNND2-216ENST00000513598 SYNMO15061 1565 aa34.11■■■■□ 3.05
CTNND2-216ENST00000513598 TOM1O60784 492 aa34.1■■■■□ 3.05
CTNND2-216ENST00000513598 NOS1P29475 1434 aa34.09■■■■□ 3.05
CTNND2-216ENST00000513598 TMEM2Q9UHN6 1383 aa34.09■■■■□ 3.05
CTNND2-216ENST00000513598 EFCAB6Q5THR3 1501 aa34.09■■■■□ 3.05
CTNND2-216ENST00000513598 ILDR2Q71H61 639 aa34.08■■■■□ 3.05
CTNND2-216ENST00000513598 EID1Q9Y6B2 187 aa34.08■■■■□ 3.05
CTNND2-216ENST00000513598 LRRC7Q96NW7 1537 aa34.04■■■■□ 3.04
CTNND2-216ENST00000513598 ITGAEP38570 1179 aa34.04■■■■□ 3.04
CTNND2-216ENST00000513598 HSPA1LP34931 641 aa34.03■■■■□ 3.04
CTNND2-216ENST00000513598 ALKQ9UM73 1620 aa34.02■■■■□ 3.04
CTNND2-216ENST00000513598 KDM5AP29375 1690 aaKnown RBP33.99■■■■□ 3.03
CTNND2-216ENST00000513598 SLC52A1Q9NWF4 448 aa33.98■■■■□ 3.03
CTNND2-216ENST00000513598 ROCK1Q13464 1354 aa33.97■■■■□ 3.03
CTNND2-216ENST00000513598 TET3O43151 1660 aa33.96■■■■□ 3.03
CTNND2-216ENST00000513598 RPRD2Q5VT52 1461 aaKnown RBP33.94■■■■□ 3.02
CTNND2-216ENST00000513598 UNC13BO14795 1591 aa33.94■■■■□ 3.02
CTNND2-216ENST00000513598 SLC26A8Q96RN1 970 aa33.93■■■■□ 3.02
CTNND2-216ENST00000513598 ADGRB3O60242 1522 aa33.93■■■■□ 3.02
CTNND2-216ENST00000513598 SENP3Q9H4L4 574 aaPredicted RBP33.92■■■■□ 3.02
CTNND2-216ENST00000513598 MYO5BQ9ULV0 1848 aa33.91■■■■□ 3.02
CTNND2-216ENST00000513598 XIRP1Q702N8 1843 aaKnown RBP33.89■■■■□ 3.02
CTNND2-216ENST00000513598 GCC2Q8IWJ2 1684 aa33.89■■■■□ 3.02
CTNND2-216ENST00000513598 E9PCH4 1651 aa33.86■■■■□ 3.01
CTNND2-216ENST00000513598 NUP155O75694 1391 aa33.84■■■■□ 3.01
CTNND2-216ENST00000513598 KCNA6P17658 529 aa33.83■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms