RNA–Protein interactions for RNA: ENST00000513567.5

GABRB1-205, Transcript of gamma-aminobutyric acid type A receptor beta1 subunit, humanhuman

TSL 4

Gene GABRB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1-205ENST00000513567 KDM5DQ9BY66 1539 aa23.8■■□□□ 1.4
GABRB1-205ENST00000513567 RSPH4AQ5TD94 716 aa23.8■■□□□ 1.4
GABRB1-205ENST00000513567 DNMT1P26358 1616 aaKnown RBP23.77■■□□□ 1.4
GABRB1-205ENST00000513567 MIA2Q96PC5 1412 aa23.76■■□□□ 1.39
GABRB1-205ENST00000513567 PZPP20742 1482 aa23.76■■□□□ 1.39
GABRB1-205ENST00000513567 TCOF1Q13428 1488 aaKnown RBP23.76■■□□□ 1.39
GABRB1-205ENST00000513567 MROH1Q8NDA8 1641 aa23.76■■□□□ 1.39
GABRB1-205ENST00000513567 RNF17Q9BXT8 1623 aaKnown RBP23.76■■□□□ 1.39
GABRB1-205ENST00000513567 PLA2R1Q13018 1463 aa23.75■■□□□ 1.39
GABRB1-205ENST00000513567 TSPY4P0CV99 314 aa23.75■■□□□ 1.39
GABRB1-205ENST00000513567 TSPY10P0CW01 314 aa23.75■■□□□ 1.39
GABRB1-205ENST00000513567 A2ML1A8K2U0 1454 aa23.75■■□□□ 1.39
GABRB1-205ENST00000513567 TNRQ92752 1358 aa23.72■■□□□ 1.39
GABRB1-205ENST00000513567 FAM135AQ9P2D6 1515 aa23.72■■□□□ 1.39
GABRB1-205ENST00000513567 CROCC2H7BZ55 1655 aa23.71■■□□□ 1.39
GABRB1-205ENST00000513567 PTPN23Q9H3S7 1636 aa23.71■■□□□ 1.39
GABRB1-205ENST00000513567 WASHC2CQ9Y4E1 1318 aa23.71■■□□□ 1.39
GABRB1-205ENST00000513567 ABCC3O15438 1527 aa23.7■■□□□ 1.38
GABRB1-205ENST00000513567 ZNF335Q9H4Z2 1342 aaPredicted RBP23.7■■□□□ 1.38
GABRB1-205ENST00000513567 ABCC5O15440 1437 aa23.69■■□□□ 1.38
GABRB1-205ENST00000513567 EIF2AK4Q9P2K8 1649 aaKnown RBP23.69■■□□□ 1.38
GABRB1-205ENST00000513567 CEP152O94986 1710 aa23.68■■□□□ 1.38
GABRB1-205ENST00000513567 NEURL4Q96JN8 1562 aa23.68■■□□□ 1.38
GABRB1-205ENST00000513567 PKD2Q13563 968 aa23.65■■□□□ 1.38
GABRB1-205ENST00000513567 POLR1AO95602 1720 aaPredicted RBP23.64■■□□□ 1.38
GABRB1-205ENST00000513567 DUOX2Q9NRD8 1548 aa23.64■■□□□ 1.37
GABRB1-205ENST00000513567 ZC3H13Q5T200 1668 aaKnown RBP23.64■■□□□ 1.37
GABRB1-205ENST00000513567 FGD6Q6ZV73 1430 aa23.63■■□□□ 1.37
GABRB1-205ENST00000513567 SPATA31D1Q6ZQQ2 1576 aa23.62■■□□□ 1.37
GABRB1-205ENST00000513567 DAPK1P53355 1430 aa23.62■■□□□ 1.37
GABRB1-205ENST00000513567 SHANK2Q9UPX8 1470 aa23.62■■□□□ 1.37
GABRB1-205ENST00000513567 CFAP65Q6ZU64 1925 aaKnown RBP23.61■■□□□ 1.37
GABRB1-205ENST00000513567 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.6■■□□□ 1.37
GABRB1-205ENST00000513567 KIF15Q9NS87 1388 aa23.6■■□□□ 1.37
GABRB1-205ENST00000513567 RRP7BPQ9NSQ0 103 aa23.59■■□□□ 1.37
GABRB1-205ENST00000513567 ERVK-7P63135 1459 aa23.59■■□□□ 1.37
GABRB1-205ENST00000513567 UGGT1Q9NYU2 1555 aa23.58■■□□□ 1.37
GABRB1-205ENST00000513567 IQSEC2Q5JU85 1478 aa23.58■■□□□ 1.37
GABRB1-205ENST00000513567 NLRP1Q9C000 1473 aa23.58■■□□□ 1.37
GABRB1-205ENST00000513567 APLP2Q06481 763 aa23.57■■□□□ 1.36
GABRB1-205ENST00000513567 PRDM15P57071 1507 aaPredicted RBP23.57■■□□□ 1.36
GABRB1-205ENST00000513567 CHIC2Q9UKJ5 165 aa23.54■■□□□ 1.36
GABRB1-205ENST00000513567 DEPDC5O75140 1603 aa23.54■■□□□ 1.36
GABRB1-205ENST00000513567 ERBINQ96RT1 1412 aa23.53■■□□□ 1.36
GABRB1-205ENST00000513567 VWDEQ8N2E2 1590 aa23.51■■□□□ 1.35
GABRB1-205ENST00000513567 UBR1Q8IWV7 1749 aa23.5■■□□□ 1.35
GABRB1-205ENST00000513567 MED14O60244 1454 aa23.49■■□□□ 1.35
GABRB1-205ENST00000513567 THEMISQ8N1K5 641 aaPredicted RBP23.48■■□□□ 1.35
GABRB1-205ENST00000513567 ANKLE2Q86XL3 938 aa23.47■■□□□ 1.35
GABRB1-205ENST00000513567 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.47■■□□□ 1.35
GABRB1-205ENST00000513567 NPHP4O75161 1426 aaPredicted RBP23.47■■□□□ 1.35
GABRB1-205ENST00000513567 STRCP1A6NGW2 1772 aa23.47■■□□□ 1.35
GABRB1-205ENST00000513567 IQGAP1P46940 1657 aa23.46■■□□□ 1.35
GABRB1-205ENST00000513567 ARHGAP31Q2M1Z3 1444 aa23.46■■□□□ 1.35
GABRB1-205ENST00000513567 ADGRL2O95490 1459 aa23.43■■□□□ 1.34
GABRB1-205ENST00000513567 ANKRD30AQ9BXX3 1397 aa23.43■■□□□ 1.34
GABRB1-205ENST00000513567 UBAP1LF5GYI3 381 aa23.43■■□□□ 1.34
GABRB1-205ENST00000513567 PIK3C2BO00750 1634 aa23.42■■□□□ 1.34
GABRB1-205ENST00000513567 LMTK2Q8IWU2 1503 aa23.41■■□□□ 1.34
GABRB1-205ENST00000513567 CPS1P31327 1500 aa23.4■■□□□ 1.34
GABRB1-205ENST00000513567 FAM50AQ14320 339 aaKnown RBP23.4■■□□□ 1.34
GABRB1-205ENST00000513567 ALKQ9UM73 1620 aa23.4■■□□□ 1.34
GABRB1-205ENST00000513567 ARHGAP23Q9P227 1491 aa23.39■■□□□ 1.34
GABRB1-205ENST00000513567 LTKP29376 864 aa23.39■■□□□ 1.33
GABRB1-205ENST00000513567 SYNMO15061 1565 aa23.39■■□□□ 1.33
GABRB1-205ENST00000513567 SLIT1O75093 1534 aa23.37■■□□□ 1.33
GABRB1-205ENST00000513567 ILDR2Q71H61 639 aa23.36■■□□□ 1.33
GABRB1-205ENST00000513567 DISP3Q9P2K9 1392 aa23.36■■□□□ 1.33
GABRB1-205ENST00000513567 EFCAB6Q5THR3 1501 aa23.35■■□□□ 1.33
GABRB1-205ENST00000513567 SCAF11Q99590 1463 aaKnown RBP23.35■■□□□ 1.33
GABRB1-205ENST00000513567 KANK1Q14678 1352 aa23.33■■□□□ 1.33
GABRB1-205ENST00000513567 PPARGC1BQ86YN6 1023 aaKnown RBP23.32■■□□□ 1.32
GABRB1-205ENST00000513567 NOS1P29475 1434 aa23.32■■□□□ 1.32
GABRB1-205ENST00000513567 IDI1Q13907 227 aa23.31■■□□□ 1.32
GABRB1-205ENST00000513567 LRRC7Q96NW7 1537 aa23.31■■□□□ 1.32
GABRB1-205ENST00000513567 ANKRD50Q9ULJ7 1429 aa23.31■■□□□ 1.32
GABRB1-205ENST00000513567 TXNDC2Q86VQ3 553 aa23.29■■□□□ 1.32
GABRB1-205ENST00000513567 PIP4K2BP78356 416 aa23.28■■□□□ 1.32
GABRB1-205ENST00000513567 TMEM2Q9UHN6 1383 aa23.27■■□□□ 1.32
GABRB1-205ENST00000513567 XIRP1Q702N8 1843 aaKnown RBP23.26■■□□□ 1.31
GABRB1-205ENST00000513567 KDM5AP29375 1690 aaKnown RBP23.26■■□□□ 1.31
GABRB1-205ENST00000513567 HSPA1LP34931 641 aa23.25■■□□□ 1.31
GABRB1-205ENST00000513567 UNC13BO14795 1591 aa23.25■■□□□ 1.31
GABRB1-205ENST00000513567 SCAF1Q9H7N4 1312 aaKnown RBP23.25■■□□□ 1.31
GABRB1-205ENST00000513567 ADGRB3O60242 1522 aa23.24■■□□□ 1.31
GABRB1-205ENST00000513567 TET3O43151 1660 aa23.24■■□□□ 1.31
GABRB1-205ENST00000513567 MYO5BQ9ULV0 1848 aa23.24■■□□□ 1.31
GABRB1-205ENST00000513567 TOM1O60784 492 aa23.21■■□□□ 1.31
GABRB1-205ENST00000513567 GCC2Q8IWJ2 1684 aa23.2■■□□□ 1.3
GABRB1-205ENST00000513567 E9PCH4 1651 aa23.19■■□□□ 1.3
GABRB1-205ENST00000513567 STAG3Q9UJ98 1225 aa23.19■■□□□ 1.3
GABRB1-205ENST00000513567 RPRD2Q5VT52 1461 aaKnown RBP23.17■■□□□ 1.3
GABRB1-205ENST00000513567 ROCK1Q13464 1354 aa23.17■■□□□ 1.3
GABRB1-205ENST00000513567 EID1Q9Y6B2 187 aa23.17■■□□□ 1.3
GABRB1-205ENST00000513567 ITGAEP38570 1179 aa23.16■■□□□ 1.3
GABRB1-205ENST00000513567 SENP3Q9H4L4 574 aaPredicted RBP23.16■■□□□ 1.3
GABRB1-205ENST00000513567 TMEM131LA2VDJ0 1609 aa23.15■■□□□ 1.3
GABRB1-205ENST00000513567 IQGAP3Q86VI3 1631 aa23.15■■□□□ 1.3
GABRB1-205ENST00000513567 SLC26A8Q96RN1 970 aa23.14■■□□□ 1.29
GABRB1-205ENST00000513567 ZFYVE9O95405 1425 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms