RNA–Protein interactions for RNA: ENST00000513263.1

SKP2-207, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-207ENST00000513263 GGT6Q6P531 493 aa17.45■□□□□ 0.38
SKP2-207ENST00000513263 RNF17Q9BXT8 1623 aaKnown RBP17.45■□□□□ 0.38
SKP2-207ENST00000513263 A2ML1A8K2U0 1454 aa17.44■□□□□ 0.38
SKP2-207ENST00000513263 TCOF1Q13428 1488 aaKnown RBP17.44■□□□□ 0.38
SKP2-207ENST00000513263 PKD2Q13563 968 aa17.44■□□□□ 0.38
SKP2-207ENST00000513263 PZPP20742 1482 aa17.44■□□□□ 0.38
SKP2-207ENST00000513263 ZNF644Q9H582 1327 aaPredicted RBP17.43■□□□□ 0.38
SKP2-207ENST00000513263 DNMT1P26358 1616 aaKnown RBP17.43■□□□□ 0.38
SKP2-207ENST00000513263 MIA2Q96PC5 1412 aa17.4■□□□□ 0.38
SKP2-207ENST00000513263 TSPY4P0CV99 314 aa17.4■□□□□ 0.38
SKP2-207ENST00000513263 TSPY10P0CW01 314 aa17.4■□□□□ 0.38
SKP2-207ENST00000513263 CROCC2H7BZ55 1655 aa17.39■□□□□ 0.37
SKP2-207ENST00000513263 NLRP1Q9C000 1473 aa17.39■□□□□ 0.37
SKP2-207ENST00000513263 TNRQ92752 1358 aa17.37■□□□□ 0.37
SKP2-207ENST00000513263 MYOM3Q5VTT5 1437 aa17.37■□□□□ 0.37
SKP2-207ENST00000513263 KIF3BO15066 747 aa17.36■□□□□ 0.37
SKP2-207ENST00000513263 DEPDC5O75140 1603 aa17.35■□□□□ 0.37
SKP2-207ENST00000513263 SHANK2Q9UPX8 1470 aa17.34■□□□□ 0.37
SKP2-207ENST00000513263 WASHC2CQ9Y4E1 1318 aa17.34■□□□□ 0.37
SKP2-207ENST00000513263 CPS1P31327 1500 aa17.33■□□□□ 0.37
SKP2-207ENST00000513263 DUOX2Q9NRD8 1548 aa17.33■□□□□ 0.37
SKP2-207ENST00000513263 SPATA31D1Q6ZQQ2 1576 aa17.32■□□□□ 0.36
SKP2-207ENST00000513263 UGGT1Q9NYU2 1555 aa17.32■□□□□ 0.36
SKP2-207ENST00000513263 ABCC3O15438 1527 aa17.32■□□□□ 0.36
SKP2-207ENST00000513263 CEP152O94986 1710 aa17.32■□□□□ 0.36
SKP2-207ENST00000513263 NEURL4Q96JN8 1562 aa17.32■□□□□ 0.36
SKP2-207ENST00000513263 NCKAP5LQ9HCH0 1330 aa17.3■□□□□ 0.36
SKP2-207ENST00000513263 PRDM15P57071 1507 aaPredicted RBP17.3■□□□□ 0.36
SKP2-207ENST00000513263 IQGAP1P46940 1657 aa17.29■□□□□ 0.36
SKP2-207ENST00000513263 PTPN23Q9H3S7 1636 aa17.29■□□□□ 0.36
SKP2-207ENST00000513263 MROH1Q8NDA8 1641 aa17.29■□□□□ 0.36
SKP2-207ENST00000513263 ERBINQ96RT1 1412 aa17.28■□□□□ 0.36
SKP2-207ENST00000513263 APLP2Q06481 763 aa17.27■□□□□ 0.36
SKP2-207ENST00000513263 THEMISQ8N1K5 641 aaPredicted RBP17.27■□□□□ 0.36
SKP2-207ENST00000513263 CFAP65Q6ZU64 1925 aaKnown RBP17.27■□□□□ 0.35
SKP2-207ENST00000513263 ZNF335Q9H4Z2 1342 aaPredicted RBP17.26■□□□□ 0.35
SKP2-207ENST00000513263 MED14O60244 1454 aa17.26■□□□□ 0.35
SKP2-207ENST00000513263 SYNMO15061 1565 aa17.26■□□□□ 0.35
SKP2-207ENST00000513263 UBR1Q8IWV7 1749 aa17.25■□□□□ 0.35
SKP2-207ENST00000513263 ERVK-7P63135 1459 aa17.24■□□□□ 0.35
SKP2-207ENST00000513263 KDM5AP29375 1690 aaKnown RBP17.24■□□□□ 0.35
SKP2-207ENST00000513263 ANKLE2Q86XL3 938 aa17.23■□□□□ 0.35
SKP2-207ENST00000513263 DISP3Q9P2K9 1392 aa17.23■□□□□ 0.35
SKP2-207ENST00000513263 ARHGAP31Q2M1Z3 1444 aa17.21■□□□□ 0.35
SKP2-207ENST00000513263 KIF15Q9NS87 1388 aa17.21■□□□□ 0.35
SKP2-207ENST00000513263 VWDEQ8N2E2 1590 aa17.2■□□□□ 0.34
SKP2-207ENST00000513263 FBXO31Q5XUX0 539 aaPredicted RBP17.2■□□□□ 0.34
SKP2-207ENST00000513263 NPHP4O75161 1426 aaPredicted RBP17.2■□□□□ 0.34
SKP2-207ENST00000513263 FGD6Q6ZV73 1430 aa17.2■□□□□ 0.34
SKP2-207ENST00000513263 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.19■□□□□ 0.34
SKP2-207ENST00000513263 UBAP1LF5GYI3 381 aa17.19■□□□□ 0.34
SKP2-207ENST00000513263 KANK4Q5T7N3 995 aaPredicted RBP17.19■□□□□ 0.34
SKP2-207ENST00000513263 KANK1Q14678 1352 aa17.18■□□□□ 0.34
SKP2-207ENST00000513263 LOC105371045A0A1W2PR82 267 aa17.18■□□□□ 0.34
SKP2-207ENST00000513263 DAPK1P53355 1430 aa17.18■□□□□ 0.34
SKP2-207ENST00000513263 ABCC5O15440 1437 aa17.16■□□□□ 0.34
SKP2-207ENST00000513263 SLIT1O75093 1534 aa17.16■□□□□ 0.34
SKP2-207ENST00000513263 LMTK2Q8IWU2 1503 aa17.16■□□□□ 0.34
SKP2-207ENST00000513263 SCAF11Q99590 1463 aaKnown RBP17.15■□□□□ 0.34
SKP2-207ENST00000513263 ANKRD30AQ9BXX3 1397 aa17.15■□□□□ 0.34
SKP2-207ENST00000513263 TOM1O60784 492 aa17.14■□□□□ 0.33
SKP2-207ENST00000513263 PIK3C2BO00750 1634 aa17.13■□□□□ 0.33
SKP2-207ENST00000513263 ARHGAP23Q9P227 1491 aa17.12■□□□□ 0.33
SKP2-207ENST00000513263 ADGRL2O95490 1459 aa17.12■□□□□ 0.33
SKP2-207ENST00000513263 EFCAB6Q5THR3 1501 aa17.11■□□□□ 0.33
SKP2-207ENST00000513263 STRCP1A6NGW2 1772 aa17.11■□□□□ 0.33
SKP2-207ENST00000513263 GCC2Q8IWJ2 1684 aa17.07■□□□□ 0.32
SKP2-207ENST00000513263 RPRD2Q5VT52 1461 aaKnown RBP17.07■□□□□ 0.32
SKP2-207ENST00000513263 ADGRB3O60242 1522 aa17.06■□□□□ 0.32
SKP2-207ENST00000513263 RRP7BPQ9NSQ0 103 aa17.06■□□□□ 0.32
SKP2-207ENST00000513263 EID1Q9Y6B2 187 aa17.06■□□□□ 0.32
SKP2-207ENST00000513263 TET3O43151 1660 aa17.06■□□□□ 0.32
SKP2-207ENST00000513263 SCAF1Q9H7N4 1312 aaKnown RBP17.05■□□□□ 0.32
SKP2-207ENST00000513263 SOCS7O14512 581 aa17.05■□□□□ 0.32
SKP2-207ENST00000513263 LRRC7Q96NW7 1537 aa17.05■□□□□ 0.32
SKP2-207ENST00000513263 MED1Q15648 1581 aaPredicted RBP17.04■□□□□ 0.32
SKP2-207ENST00000513263 XIRP1Q702N8 1843 aaKnown RBP17.03■□□□□ 0.32
SKP2-207ENST00000513263 TMEM2Q9UHN6 1383 aa17.02■□□□□ 0.32
SKP2-207ENST00000513263 STAG3Q9UJ98 1225 aa17.02■□□□□ 0.32
SKP2-207ENST00000513263 UNC13BO14795 1591 aa17.02■□□□□ 0.31
SKP2-207ENST00000513263 ALKQ9UM73 1620 aa17.01■□□□□ 0.31
SKP2-207ENST00000513263 NOS1P29475 1434 aa17■□□□□ 0.31
SKP2-207ENST00000513263 PIP4K2BP78356 416 aa17■□□□□ 0.31
SKP2-207ENST00000513263 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17■□□□□ 0.311e-6■■□□□ 12.2
SKP2-207ENST00000513263 ANKRD50Q9ULJ7 1429 aa17■□□□□ 0.31
SKP2-207ENST00000513263 ILDR2Q71H61 639 aa16.99■□□□□ 0.31
SKP2-207ENST00000513263 TXNDC2Q86VQ3 553 aa16.99■□□□□ 0.31
SKP2-207ENST00000513263 MYO5BQ9ULV0 1848 aa16.98■□□□□ 0.31
SKP2-207ENST00000513263 SLC52A1Q9NWF4 448 aa16.98■□□□□ 0.31
SKP2-207ENST00000513263 NKTRP30414 1462 aaKnown RBP16.98■□□□□ 0.31
SKP2-207ENST00000513263 NWD1Q149M9 1564 aa16.98■□□□□ 0.31
SKP2-207ENST00000513263 HSPA1LP34931 641 aa16.97■□□□□ 0.31
SKP2-207ENST00000513263 CHIC2Q9UKJ5 165 aa16.96■□□□□ 0.31
SKP2-207ENST00000513263 IQGAP3Q86VI3 1631 aa16.96■□□□□ 0.3
SKP2-207ENST00000513263 FAM50AQ14320 339 aaKnown RBP16.95■□□□□ 0.3
SKP2-207ENST00000513263 LTKP29376 864 aa16.94■□□□□ 0.3
SKP2-207ENST00000513263 ROCK1Q13464 1354 aa16.93■□□□□ 0.3
SKP2-207ENST00000513263 E9PCH4 1651 aa16.92■□□□□ 0.3
SKP2-207ENST00000513263 CHD2O14647 1828 aaKnown RBP16.92■□□□□ 0.3
SKP2-207ENST00000513263 DIP2AQ14689 1571 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms