RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 RASEFQ8IZ41 740 aa4.77□□□□□ -1.65
PVT1-202ENST00000512617 GLMNQ92990 594 aa4.77□□□□□ -1.65
PVT1-202ENST00000512617 TCF3P15923 654 aa4.76□□□□□ -1.65
PVT1-202ENST00000512617 NLRP6P59044 892 aa4.76□□□□□ -1.65
PVT1-202ENST00000512617 SKIV2LQ15477 1246 aaKnown RBP4.76□□□□□ -1.65
PVT1-202ENST00000512617 ZNF467Q7Z7K2 595 aaPredicted RBP4.76□□□□□ -1.65
PVT1-202ENST00000512617 KIAA1522Q9P206 1035 aaPredicted RBP4.76□□□□□ -1.65
PVT1-202ENST00000512617 CADPSQ9ULU8 1353 aa4.76□□□□□ -1.65
PVT1-202ENST00000512617 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.75□□□□□ -1.65
PVT1-202ENST00000512617 ANKRD62A6NC57 917 aa4.75□□□□□ -1.65
PVT1-202ENST00000512617 NOL8Q76FK4 1167 aaKnown RBP4.75□□□□□ -1.65
PVT1-202ENST00000512617 C8orf37Q96NL8 207 aa4.75□□□□□ -1.65
PVT1-202ENST00000512617 BRPF3Q9ULD4 1205 aa4.75□□□□□ -1.65
PVT1-202ENST00000512617 NUTM2FA1L443 756 aa4.74□□□□□ -1.65
PVT1-202ENST00000512617 CARNS1A5YM72 827 aa4.74□□□□□ -1.65
PVT1-202ENST00000512617 GNPATO15228 680 aa4.74□□□□□ -1.65
PVT1-202ENST00000512617 RFX1P22670 979 aa4.74□□□□□ -1.65
PVT1-202ENST00000512617 BANK1Q8NDB2 785 aa4.74□□□□□ -1.65
PVT1-202ENST00000512617 OXER1Q8TDS5 423 aa4.74□□□□□ -1.65
PVT1-202ENST00000512617 ZNF526Q8TF50 670 aaPredicted RBP4.74□□□□□ -1.65
PVT1-202ENST00000512617 CRISPLD2Q9H0B8 497 aa4.74□□□□□ -1.65
PVT1-202ENST00000512617 VRTNQ9H8Y1 702 aa4.74□□□□□ -1.65
PVT1-202ENST00000512617 SNRKQ9NRH2 765 aa4.74□□□□□ -1.65
PVT1-202ENST00000512617 PPP1R1BQ9UD71 204 aaPredicted RBP4.74□□□□□ -1.65
PVT1-202ENST00000512617 ERCC3P19447 782 aa4.73□□□□□ -1.65
PVT1-202ENST00000512617 PROCA1Q8NCQ7 364 aaPredicted RBP4.73□□□□□ -1.65
PVT1-202ENST00000512617 FBXO22Q8NEZ5 403 aa4.73□□□□□ -1.65
PVT1-202ENST00000512617 UBXN4Q92575 508 aa4.73□□□□□ -1.65
PVT1-202ENST00000512617 GDPD2Q9HCC8 539 aa4.73□□□□□ -1.65
PVT1-202ENST00000512617 SPDYE16A6NNV3 312 aaPredicted RBP4.72□□□□□ -1.65
PVT1-202ENST00000512617 POM121CA8CG34 1229 aa4.72□□□□□ -1.65
PVT1-202ENST00000512617 NEFLP07196 543 aa4.72□□□□□ -1.65
PVT1-202ENST00000512617 TXNDC2Q86VQ3 553 aa4.72□□□□□ -1.65
PVT1-202ENST00000512617 HIRIP3Q9BW71 556 aaPredicted RBP4.72□□□□□ -1.65
PVT1-202ENST00000512617 DPYSL4O14531 572 aa4.71□□□□□ -1.66
PVT1-202ENST00000512617 ABL2P42684 1182 aa4.71□□□□□ -1.66
PVT1-202ENST00000512617 ZC3H6P61129 1189 aaKnown RBP4.71□□□□□ -1.66
PVT1-202ENST00000512617 HIC1Q14526 733 aa4.71□□□□□ -1.66
PVT1-202ENST00000512617 PDIA6Q15084 440 aa4.71□□□□□ -1.66
PVT1-202ENST00000512617 SF3A1Q15459 793 aaKnown RBP4.71□□□□□ -1.66
PVT1-202ENST00000512617 B4GALNT3Q6L9W6 998 aa4.71□□□□□ -1.66
PVT1-202ENST00000512617 PRM3Q9NNZ6 103 aa4.71□□□□□ -1.66
PVT1-202ENST00000512617 POLR3EQ9NVU0 708 aa4.71□□□□□ -1.66
PVT1-202ENST00000512617 GNEQ9Y223 722 aaKnown RBP4.71□□□□□ -1.66
PVT1-202ENST00000512617 ZC3H4Q9UPT8 1303 aaKnown RBP4.71□□□□□ -1.66
PVT1-202ENST00000512617 SOX12O15370 315 aa4.7□□□□□ -1.66
PVT1-202ENST00000512617 MARCH6O60337 910 aa4.7□□□□□ -1.66
PVT1-202ENST00000512617 ZNF16P17020 682 aaPredicted RBP4.7□□□□□ -1.66
PVT1-202ENST00000512617 PSEN1P49768 467 aa4.7□□□□□ -1.66
PVT1-202ENST00000512617 SIRT1Q96EB6 747 aa4.7□□□□□ -1.66
PVT1-202ENST00000512617 BCL2L13Q9BXK5 485 aa4.7□□□□□ -1.66
PVT1-202ENST00000512617 PHF8Q9UPP1 1060 aa4.7□□□□□ -1.66
PVT1-202ENST00000512617 PLEKHD1A6NEE1 506 aa4.69□□□□□ -1.66
PVT1-202ENST00000512617 FCHSD2O94868 740 aa4.69□□□□□ -1.66
PVT1-202ENST00000512617 RFC5P40937 340 aa4.69□□□□□ -1.66
PVT1-202ENST00000512617 CFAP70Q5T0N1 1121 aa4.69□□□□□ -1.66
PVT1-202ENST00000512617 TMED8Q6PL24 325 aaPredicted RBP4.69□□□□□ -1.66
PVT1-202ENST00000512617 EFCAB3Q8N7B9 438 aa4.69□□□□□ -1.66
PVT1-202ENST00000512617 CCER1Q8TC90 406 aaPredicted RBP4.69□□□□□ -1.66
PVT1-202ENST00000512617 REPIN1Q9BWE0 567 aaKnown RBP4.69□□□□□ -1.66
PVT1-202ENST00000512617 FECHP22830 423 aa4.68□□□□□ -1.66
PVT1-202ENST00000512617 CLCN1P35523 988 aa4.68□□□□□ -1.66
PVT1-202ENST00000512617 MNX1P50219 401 aaPredicted RBP4.68□□□□□ -1.66
PVT1-202ENST00000512617 TMEM259Q4ZIN3 620 aa4.68□□□□□ -1.66
PVT1-202ENST00000512617 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.68□□□□□ -1.66
PVT1-202ENST00000512617 PRDM16Q9HAZ2 1276 aa4.68□□□□□ -1.66
PVT1-202ENST00000512617 PCDHB8Q9UN66 801 aa4.68□□□□□ -1.66
PVT1-202ENST00000512617 PCDHB13Q9Y5F0 798 aa4.68□□□□□ -1.66
PVT1-202ENST00000512617 GRXCR2A6NFK2 248 aa4.67□□□□□ -1.66
PVT1-202ENST00000512617 SRPK2P78362 688 aaKnown RBP4.67□□□□□ -1.66
PVT1-202ENST00000512617 NAALADL2Q58DX5 795 aa4.67□□□□□ -1.66
PVT1-202ENST00000512617 PPP1R15BQ5SWA1 713 aa4.67□□□□□ -1.66
PVT1-202ENST00000512617 HDGFL1Q5TGJ6 251 aa4.67□□□□□ -1.66
PVT1-202ENST00000512617 DNAJC14Q6Y2X3 702 aaPredicted RBP4.67□□□□□ -1.66
PVT1-202ENST00000512617 MTMR14Q8NCE2 650 aa4.67□□□□□ -1.66
PVT1-202ENST00000512617 GIPC2Q8TF65 315 aa4.67□□□□□ -1.66
PVT1-202ENST00000512617 BEGAINQ9BUH8 593 aa4.67□□□□□ -1.66
PVT1-202ENST00000512617 RIPOR2Q9Y4F9 1068 aa4.67□□□□□ -1.66
PVT1-202ENST00000512617 LOC102724159A0A0B4J2E5 919 aa4.66□□□□□ -1.66
PVT1-202ENST00000512617 TMEM88BA6NKF7 163 aa4.66□□□□□ -1.66
PVT1-202ENST00000512617 CLK2P49760 499 aaKnown RBP4.66□□□□□ -1.66
PVT1-202ENST00000512617 IRX6P78412 446 aaPredicted RBP4.66□□□□□ -1.66
PVT1-202ENST00000512617 PWP2Q15269 919 aaKnown RBP4.66□□□□□ -1.66
PVT1-202ENST00000512617 MYH16Q9H6N6 1097 aa4.66□□□□□ -1.66
PVT1-202ENST00000512617 GPCPD1Q9NPB8 672 aa4.66□□□□□ -1.66
PVT1-202ENST00000512617 CREBZFQ9NS37 354 aa4.66□□□□□ -1.66
PVT1-202ENST00000512617 SSTR3P32745 418 aaPredicted RBP4.65□□□□□ -1.67
PVT1-202ENST00000512617 ZNF326Q5BKZ1 582 aaKnown RBP4.65□□□□□ -1.67
PVT1-202ENST00000512617 GIMAP6Q6P9H5 292 aa4.65□□□□□ -1.67
PVT1-202ENST00000512617 POTEHQ6S545 545 aa4.65□□□□□ -1.67
PVT1-202ENST00000512617 MICAL1Q8TDZ2 1067 aa4.65□□□□□ -1.67
PVT1-202ENST00000512617 PPP1R12CQ9BZL4 782 aa4.65□□□□□ -1.67
PVT1-202ENST00000512617 CABP2Q9NPB3 220 aa4.65□□□□□ -1.67
PVT1-202ENST00000512617 EMILIN3Q9NT22 766 aa4.65□□□□□ -1.67
PVT1-202ENST00000512617 TBC1D2BQ9UPU7 963 aa4.65□□□□□ -1.67
PVT1-202ENST00000512617 PPME1Q9Y570 386 aa4.65□□□□□ -1.67
PVT1-202ENST00000512617 ATG7O95352 703 aa4.64□□□□□ -1.67
PVT1-202ENST00000512617 LMOD1P29536 600 aaPredicted RBP4.64□□□□□ -1.67
PVT1-202ENST00000512617 MDM2Q00987 491 aaPredicted RBP4.64□□□□□ -1.67
PVT1-202ENST00000512617 GORABQ5T7V8 394 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms