RNA–Protein interactions for RNA: ENST00000511896.5

APBB3-219, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 2

Gene APBB3, Length 2,032 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-219ENST00000511896 KDM5CP41229 1560 aa27.06■■□□□ 1.92
APBB3-219ENST00000511896 HSPA5P11021 654 aaKnown RBP27.06■■□□□ 1.92
APBB3-219ENST00000511896 EIF4G2P78344 907 aaKnown RBP eCLIP27.06■■□□□ 1.92
APBB3-219ENST00000511896 DDX10Q13206 875 aaKnown RBP27.06■■□□□ 1.92
APBB3-219ENST00000511896 DEPDC5O75140 1603 aa27.05■■□□□ 1.92
APBB3-219ENST00000511896 CCDC144AA2RUR9 1427 aa27.05■■□□□ 1.92
APBB3-219ENST00000511896 MAP3K4Q9Y6R4 1608 aa27.04■■□□□ 1.92
APBB3-219ENST00000511896 GLI2P10070 1586 aa27.03■■□□□ 1.92
APBB3-219ENST00000511896 ATP10AO60312 1499 aa27.03■■□□□ 1.92
APBB3-219ENST00000511896 KIF3BO15066 747 aa27.02■■□□□ 1.92
APBB3-219ENST00000511896 MLH3Q9UHC1 1453 aa27.02■■□□□ 1.92
APBB3-219ENST00000511896 EIF2AK4Q9P2K8 1649 aaKnown RBP27.01■■□□□ 1.91
APBB3-219ENST00000511896 UHRF1BP1Q6BDS2 1440 aa26.99■■□□□ 1.91
APBB3-219ENST00000511896 VWDEQ8N2E2 1590 aa26.97■■□□□ 1.91
APBB3-219ENST00000511896 KANK1Q14678 1352 aa26.96■■□□□ 1.91
APBB3-219ENST00000511896 ZNF326Q5BKZ1 582 aaKnown RBP26.96■■□□□ 1.91
APBB3-219ENST00000511896 HECW2Q9P2P5 1572 aa26.96■■□□□ 1.91
APBB3-219ENST00000511896 A2MP01023 1474 aa26.96■■□□□ 1.91
APBB3-219ENST00000511896 RAPGEF3O95398 923 aa26.95■■□□□ 1.9
APBB3-219ENST00000511896 PRDM15P57071 1507 aaPredicted RBP26.95■■□□□ 1.9
APBB3-219ENST00000511896 E9PCH4 1651 aa26.94■■□□□ 1.9
APBB3-219ENST00000511896 DCAF11Q8TEB1 546 aa26.94■■□□□ 1.9
APBB3-219ENST00000511896 FAM69CQ0P6D2 419 aa26.94■■□□□ 1.9
APBB3-219ENST00000511896 SPATA31E1Q6ZUB1 1445 aa26.93■■□□□ 1.9
APBB3-219ENST00000511896 MROH1Q8NDA8 1641 aa26.93■■□□□ 1.9
APBB3-219ENST00000511896 DIP2BQ9P265 1576 aa26.93■■□□□ 1.9
APBB3-219ENST00000511896 TET3O43151 1660 aa26.92■■□□□ 1.9
APBB3-219ENST00000511896 KDM2AQ9Y2K7 1162 aa26.92■■□□□ 1.9
APBB3-219ENST00000511896 WASHC2AQ641Q2 1341 aa26.88■■□□□ 1.89
APBB3-219ENST00000511896 FRMPD1Q5SYB0 1578 aa26.88■■□□□ 1.89
APBB3-219ENST00000511896 RALGAPBQ86X10 1494 aa26.88■■□□□ 1.89
APBB3-219ENST00000511896 RGL3Q3MIN7 710 aa26.88■■□□□ 1.89
APBB3-219ENST00000511896 PTPRTO14522 1441 aa26.87■■□□□ 1.89
APBB3-219ENST00000511896 ABCA6Q8N139 1617 aa26.87■■□□□ 1.89
APBB3-219ENST00000511896 RICTORQ6R327 1708 aa26.86■■□□□ 1.89
APBB3-219ENST00000511896 TRPM2O94759 1503 aa26.85■■□□□ 1.89
APBB3-219ENST00000511896 RNF17Q9BXT8 1623 aaKnown RBP26.84■■□□□ 1.89
APBB3-219ENST00000511896 SPHKAPQ2M3C7 1700 aa26.83■■□□□ 1.89
APBB3-219ENST00000511896 USP47Q96K76 1375 aa26.82■■□□□ 1.88
APBB3-219ENST00000511896 C11orf95C9JLR9 678 aaPredicted RBP26.82■■□□□ 1.88
APBB3-219ENST00000511896 YTHDC1Q96MU7 727 aaKnown RBP26.82■■□□□ 1.88
APBB3-219ENST00000511896 PRAG1Q86YV5 1406 aa26.8■■□□□ 1.88
APBB3-219ENST00000511896 CENPBP07199 599 aaPredicted RBP26.8■■□□□ 1.88
APBB3-219ENST00000511896 BCORL1Q5H9F3 1711 aa26.8■■□□□ 1.88
APBB3-219ENST00000511896 LMTK2Q8IWU2 1503 aa26.79■■□□□ 1.88
APBB3-219ENST00000511896 DIP2CQ9Y2E4 1556 aa26.79■■□□□ 1.88
APBB3-219ENST00000511896 CARD11Q9BXL7 1154 aa26.78■■□□□ 1.88
APBB3-219ENST00000511896 EFCAB6Q5THR3 1501 aa26.78■■□□□ 1.88
APBB3-219ENST00000511896 CCDC7Q96M83 1385 aa26.77■■□□□ 1.88
APBB3-219ENST00000511896 PPRC1Q5VV67 1664 aaKnown RBP26.77■■□□□ 1.88
APBB3-219ENST00000511896 TSPOAP1O95153 1857 aa26.76■■□□□ 1.87
APBB3-219ENST00000511896 GGT6Q6P531 493 aa26.76■■□□□ 1.87
APBB3-219ENST00000511896 CLTCL1P53675 1640 aa26.75■■□□□ 1.87
APBB3-219ENST00000511896 YEATS2Q9ULM3 1422 aa26.74■■□□□ 1.87
APBB3-219ENST00000511896 CEP152O94986 1710 aa26.74■■□□□ 1.87
APBB3-219ENST00000511896 ROCK2O75116 1388 aaKnown RBP26.73■■□□□ 1.87
APBB3-219ENST00000511896 ANP32CO43423 234 aa26.73■■□□□ 1.87
APBB3-219ENST00000511896 TRPM1Q7Z4N2 1603 aa26.73■■□□□ 1.87
APBB3-219ENST00000511896 KIF7Q2M1P5 1343 aa26.71■■□□□ 1.87
APBB3-219ENST00000511896 POLR1AO95602 1720 aaPredicted RBP26.71■■□□□ 1.87
APBB3-219ENST00000511896 ZMYM4Q5VZL5 1548 aa26.7■■□□□ 1.87
APBB3-219ENST00000511896 WASHC2CQ9Y4E1 1318 aa26.68■■□□□ 1.86
APBB3-219ENST00000511896 GPRASP1Q5JY77 1395 aa26.67■■□□□ 1.86
APBB3-219ENST00000511896 KIF13AQ9H1H9 1805 aa26.67■■□□□ 1.86
APBB3-219ENST00000511896 NBPF1Q3BBV0 1214 aa26.66■■□□□ 1.86
APBB3-219ENST00000511896 NPATQ14207 1427 aa26.66■■□□□ 1.86
APBB3-219ENST00000511896 STAC3Q96MF2 364 aa26.66■■□□□ 1.86
APBB3-219ENST00000511896 CNTLNQ9NXG0 1405 aa26.66■■□□□ 1.86
APBB3-219ENST00000511896 ABCC3O15438 1527 aa26.66■■□□□ 1.86
APBB3-219ENST00000511896 NEURL4Q96JN8 1562 aa26.65■■□□□ 1.86
APBB3-219ENST00000511896 UGGT1Q9NYU2 1555 aa26.64■■□□□ 1.85
APBB3-219ENST00000511896 ST20-MTHFSA0A0A6YYL1 179 aa26.63■■□□□ 1.85
APBB3-219ENST00000511896 CCER2I3L3R5 266 aa26.62■■□□□ 1.85
APBB3-219ENST00000511896 ARID4BQ4LE39 1312 aaPredicted RBP26.62■■□□□ 1.85
APBB3-219ENST00000511896 LAMC1P11047 1609 aa26.6■■□□□ 1.85
APBB3-219ENST00000511896 MADDQ8WXG6 1647 aa26.58■■□□□ 1.85
APBB3-219ENST00000511896 CFAP65Q6ZU64 1925 aaKnown RBP26.58■■□□□ 1.85
APBB3-219ENST00000511896 CAMSAP1Q5T5Y3 1602 aa26.57■■□□□ 1.84
APBB3-219ENST00000511896 KIF1BO60333 1816 aa26.57■■□□□ 1.84
APBB3-219ENST00000511896 COL17A1Q9UMD9 1497 aaPredicted RBP26.53■■□□□ 1.84
APBB3-219ENST00000511896 ARHGAP31Q2M1Z3 1444 aa26.53■■□□□ 1.84
APBB3-219ENST00000511896 ZC3H13Q5T200 1668 aaKnown RBP26.53■■□□□ 1.84
APBB3-219ENST00000511896 NOS1P29475 1434 aa26.52■■□□□ 1.84
APBB3-219ENST00000511896 REREQ9P2R6 1566 aa26.51■■□□□ 1.83
APBB3-219ENST00000511896 POLR3GLQ9BT43 218 aa26.49■■□□□ 1.83
APBB3-219ENST00000511896 SIGLEC1Q9BZZ2 1709 aa26.49■■□□□ 1.83
APBB3-219ENST00000511896 MROH2AA6NES4 1674 aa26.49■■□□□ 1.83
APBB3-219ENST00000511896 ADGRB3O60242 1522 aa26.49■■□□□ 1.83
APBB3-219ENST00000511896 MYOM2P54296 1465 aa26.48■■□□□ 1.83
APBB3-219ENST00000511896 AGLP35573 1532 aa26.47■■□□□ 1.83
APBB3-219ENST00000511896 IFT172Q9UG01 1749 aa26.45■■□□□ 1.83
APBB3-219ENST00000511896 TESK2Q96S53 571 aa26.45■■□□□ 1.82
APBB3-219ENST00000511896 CHGAP10645 457 aaKnown RBP26.44■■□□□ 1.82
APBB3-219ENST00000511896 PRKRIP1Q9H875 184 aaPredicted RBP26.44■■□□□ 1.82
APBB3-219ENST00000511896 ADGRF5Q8IZF2 1346 aa26.44■■□□□ 1.82
APBB3-219ENST00000511896 SCAF1Q9H7N4 1312 aaKnown RBP26.44■■□□□ 1.82
APBB3-219ENST00000511896 SYNMO15061 1565 aa26.43■■□□□ 1.82
APBB3-219ENST00000511896 KIAA1210Q9ULL0 1709 aa26.42■■□□□ 1.82
APBB3-219ENST00000511896 PIK3C2BO00750 1634 aa26.42■■□□□ 1.82
APBB3-219ENST00000511896 PPP6R1Q9UPN7 881 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms