RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-208ENST00000511895 POTEB3A0JP26 581 aa13.24□□□□□ -0.29
LINC01088-208ENST00000511895 POTEBQ6S5H4 581 aa13.24□□□□□ -0.29
LINC01088-208ENST00000511895 KCNK17Q96T54 332 aa13.24□□□□□ -0.29
LINC01088-208ENST00000511895 POTEGQ6S5H5 508 aa13.23□□□□□ -0.29
LINC01088-208ENST00000511895 ZNF687Q8N1G0 1237 aa13.23□□□□□ -0.29
LINC01088-208ENST00000511895 CDHR5Q9HBB8 845 aa13.23□□□□□ -0.29
LINC01088-208ENST00000511895 AXIN2Q9Y2T1 843 aa13.21□□□□□ -0.29
LINC01088-208ENST00000511895 POTEMA6NI47 508 aa13.2□□□□□ -0.3
LINC01088-208ENST00000511895 ARHGAP33O14559 1287 aa13.19□□□□□ -0.3
LINC01088-208ENST00000511895 FCHSD2O94868 740 aa13.19□□□□□ -0.3
LINC01088-208ENST00000511895 PBX2P40425 430 aa13.18□□□□□ -0.3
LINC01088-208ENST00000511895 PSEN2P49810 448 aa13.18□□□□□ -0.3
LINC01088-208ENST00000511895 PPP1R3GB7ZBB8 358 aa13.16□□□□□ -0.3
LINC01088-208ENST00000511895 COL9A1P20849 921 aa13.16□□□□□ -0.3
LINC01088-208ENST00000511895 PTGDRQ13258 359 aa13.15□□□□□ -0.3
LINC01088-208ENST00000511895 TPRNQ4KMQ1 711 aa13.15□□□□□ -0.3
LINC01088-208ENST00000511895 CERKQ8TCT0 537 aa13.15□□□□□ -0.3
LINC01088-208ENST00000511895 ZC3H15Q8WU90 426 aaKnown RBP13.15□□□□□ -0.3
LINC01088-208ENST00000511895 POTEEQ6S8J3 1075 aa13.14□□□□□ -0.31
LINC01088-208ENST00000511895 NPDC1Q9NQX5 325 aaPredicted RBP13.13□□□□□ -0.31
LINC01088-208ENST00000511895 HIC1Q14526 733 aa13.12□□□□□ -0.31
LINC01088-208ENST00000511895 GPR37O15354 613 aa13.1□□□□□ -0.31
LINC01088-208ENST00000511895 DMRTA1Q5VZB9 504 aa13.1□□□□□ -0.31
LINC01088-208ENST00000511895 GNPATO15228 680 aa13.09□□□□□ -0.31
LINC01088-208ENST00000511895 PRSS12P56730 875 aa13.08□□□□□ -0.32
LINC01088-208ENST00000511895 CDAN1Q8IWY9 1227 aa13.08□□□□□ -0.32
LINC01088-208ENST00000511895 CDCA7LQ96GN5 454 aa13.08□□□□□ -0.32
LINC01088-208ENST00000511895 KRI1Q8N9T8 703 aaKnown RBP13.07□□□□□ -0.32
LINC01088-208ENST00000511895 LSM11P83369 360 aaKnown RBP eCLIP13.06□□□□□ -0.32
LINC01088-208ENST00000511895 PROX2Q3B8N5 592 aa13.06□□□□□ -0.32
LINC01088-208ENST00000511895 PADI6Q6TGC4 694 aa13.06□□□□□ -0.32
LINC01088-208ENST00000511895 ANKRD13DQ6ZTN6 518 aa13.06□□□□□ -0.32
LINC01088-208ENST00000511895 ZBED2Q9BTP6 218 aa13.06□□□□□ -0.32
LINC01088-208ENST00000511895 ZMYND10O75800 440 aa13.05□□□□□ -0.32
LINC01088-208ENST00000511895 PRKCSHP14314 528 aaPredicted RBP13.04□□□□□ -0.32
LINC01088-208ENST00000511895 FECHP22830 423 aa13.04□□□□□ -0.32
LINC01088-208ENST00000511895 RBM27Q9P2N5 1060 aaKnown RBP13.03□□□□□ -0.32
LINC01088-208ENST00000511895 TRIM6-TRIM34B2RNG4 842 aa13.02□□□□□ -0.33
LINC01088-208ENST00000511895 BARGINQ6ZT62 677 aa13.02□□□□□ -0.33
LINC01088-208ENST00000511895 PACS2Q86VP3 889 aa13.01□□□□□ -0.33
LINC01088-208ENST00000511895 KRTAP3-3Q9BYR6 98 aa13.01□□□□□ -0.33
LINC01088-208ENST00000511895 KRTAP3-2Q9BYR7 98 aa13.01□□□□□ -0.33
LINC01088-208ENST00000511895 TSKSQ9UJT2 592 aa13.01□□□□□ -0.33
LINC01088-208ENST00000511895 SLC4A5Q9BY07 1137 aa13□□□□□ -0.33
LINC01088-208ENST00000511895 VPS9D1Q9Y2B5 631 aa13□□□□□ -0.33
LINC01088-208ENST00000511895 ADGRD1Q6QNK2 874 aa12.99□□□□□ -0.33
LINC01088-208ENST00000511895 KIAA1468Q9P260 1216 aa12.99□□□□□ -0.33
LINC01088-208ENST00000511895 TK2O00142 265 aa12.98□□□□□ -0.33
LINC01088-208ENST00000511895 MAP2K5Q13163 448 aa12.98□□□□□ -0.33
LINC01088-208ENST00000511895 FAM198AQ9UFP1 575 aa12.98□□□□□ -0.33
LINC01088-208ENST00000511895 ONECUT3O60422 494 aaPredicted RBP12.97□□□□□ -0.33
LINC01088-208ENST00000511895 TTC13Q8NBP0 860 aa12.97□□□□□ -0.33
LINC01088-208ENST00000511895 MINK1Q8N4C8 1332 aaPredicted RBP12.96□□□□□ -0.33
LINC01088-208ENST00000511895 NBPF26B4DH59 902 aa12.96□□□□□ -0.33
LINC01088-208ENST00000511895 FAM161AQ3B820 660 aa12.96□□□□□ -0.33
LINC01088-208ENST00000511895 STAC3Q96MF2 364 aa12.96□□□□□ -0.33
LINC01088-208ENST00000511895 SLC24A3Q9HC58 644 aa12.96□□□□□ -0.33
LINC01088-208ENST00000511895 RABGEF1Q9UJ41 708 aa12.96□□□□□ -0.33
LINC01088-208ENST00000511895 PNMA3Q9UL41 463 aa12.96□□□□□ -0.33
LINC01088-208ENST00000511895 IRF6O14896 467 aa12.94□□□□□ -0.34
LINC01088-208ENST00000511895 NUDT18Q6ZVK8 323 aa12.94□□□□□ -0.34
LINC01088-208ENST00000511895 SMAPO00193 183 aa12.93□□□□□ -0.34
LINC01088-208ENST00000511895 TATDN2Q93075 761 aa12.93□□□□□ -0.34
LINC01088-208ENST00000511895 CCDC102AQ96A19 550 aa12.93□□□□□ -0.34
LINC01088-208ENST00000511895 NBPF3Q9H094 633 aa12.93□□□□□ -0.34
LINC01088-208ENST00000511895 ADGRG1Q9Y653 693 aa12.93□□□□□ -0.34
LINC01088-208ENST00000511895 RBM46Q8TBY0 533 aaKnown RBP12.92□□□□□ -0.34
LINC01088-208ENST00000511895 PCDH10Q9P2E7 1040 aa12.92□□□□□ -0.34
LINC01088-208ENST00000511895 SEPT9Q9UHD8 586 aaPredicted RBP12.92□□□□□ -0.34
LINC01088-208ENST00000511895 OATP04181 439 aa12.91□□□□□ -0.34
LINC01088-208ENST00000511895 MRPL50Q8N5N7 158 aaKnown RBP12.9□□□□□ -0.34
LINC01088-208ENST00000511895 AK7Q96M32 723 aa12.9□□□□□ -0.34
LINC01088-208ENST00000511895 C3orf80F5H4A9 247 aa12.89□□□□□ -0.35
LINC01088-208ENST00000511895 HRO43593 1189 aa12.87□□□□□ -0.35
LINC01088-208ENST00000511895 GOLGA8CPA6NN73 597 aa12.86□□□□□ -0.35
LINC01088-208ENST00000511895 BHMG1C9JSJ3 638 aaPredicted RBP12.86□□□□□ -0.35
LINC01088-208ENST00000511895 METTL3Q86U44 580 aaKnown RBP12.86□□□□□ -0.35
LINC01088-208ENST00000511895 PXYLP1Q8TE99 480 aa12.86□□□□□ -0.35
LINC01088-208ENST00000511895 EYA1Q99502 592 aa12.85□□□□□ -0.35
LINC01088-208ENST00000511895 FAM98CQ17RN3 349 aaKnown RBP12.84□□□□□ -0.35
LINC01088-208ENST00000511895 LAPTM4BQ86VI4 370 aa12.83□□□□□ -0.36
LINC01088-208ENST00000511895 RCCD1A6NED2 376 aa12.82□□□□□ -0.36
LINC01088-208ENST00000511895 TRIM66O15016 1216 aa12.81□□□□□ -0.36
LINC01088-208ENST00000511895 DNAJB2P25686 324 aa12.81□□□□□ -0.36
LINC01088-208ENST00000511895 NLRP7Q8WX94 980 aa12.81□□□□□ -0.36
LINC01088-208ENST00000511895 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.8□□□□□ -0.36
LINC01088-208ENST00000511895 HDGFP51858 240 aaKnown RBP12.8□□□□□ -0.36
LINC01088-208ENST00000511895 PHOX2BQ99453 314 aa12.8□□□□□ -0.36
LINC01088-208ENST00000511895 ZFRQ96KR1 1074 aaKnown RBP12.79□□□□□ -0.36
LINC01088-208ENST00000511895 MDM2Q00987 491 aaPredicted RBP12.77□□□□□ -0.37
LINC01088-208ENST00000511895 TTLL12Q14166 644 aaPredicted RBP12.77□□□□□ -0.37
LINC01088-208ENST00000511895 ANKK1Q8NFD2 765 aa12.76□□□□□ -0.37
LINC01088-208ENST00000511895 PDE4DQ08499 809 aa12.75□□□□□ -0.37
LINC01088-208ENST00000511895 SWT1Q5T5J6 900 aaKnown RBP12.75□□□□□ -0.37
LINC01088-208ENST00000511895 SAMD7Q7Z3H4 446 aa12.75□□□□□ -0.37
LINC01088-208ENST00000511895 WNT2BQ93097 391 aa12.75□□□□□ -0.37
LINC01088-208ENST00000511895 TMEM134Q9H6X4 195 aa12.75□□□□□ -0.37
LINC01088-208ENST00000511895 RNF40O75150 1001 aa12.74□□□□□ -0.37
LINC01088-208ENST00000511895 MYT1LQ9UL68 1186 aa12.74□□□□□ -0.37
LINC01088-208ENST00000511895 CLCN1P35523 988 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms