RNA–Protein interactions for RNA: ENST00000511891.5

COPS4-211, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-211ENST00000511891 MYOM3Q5VTT5 1437 aa15.56■□□□□ 0.08
COPS4-211ENST00000511891 CLTCQ00610 1675 aaKnown RBP15.55■□□□□ 0.08
COPS4-211ENST00000511891 ARHGEF5Q12774 1597 aa15.55■□□□□ 0.08
COPS4-211ENST00000511891 SETD1BQ9UPS6 1966 aaKnown RBP15.55■□□□□ 0.08
COPS4-211ENST00000511891 KIF3BO15066 747 aa15.54■□□□□ 0.08
COPS4-211ENST00000511891 TSPY4P0CV99 314 aa15.54■□□□□ 0.08
COPS4-211ENST00000511891 TSPY10P0CW01 314 aa15.54■□□□□ 0.08
COPS4-211ENST00000511891 MROH2AA6NES4 1674 aa15.54■□□□□ 0.08
COPS4-211ENST00000511891 MIA2Q96PC5 1412 aa15.52■□□□□ 0.08
COPS4-211ENST00000511891 NPATQ14207 1427 aa15.51■□□□□ 0.07
COPS4-211ENST00000511891 PTPRKQ15262 1439 aa15.5■□□□□ 0.07
COPS4-211ENST00000511891 STRCQ7RTU9 1775 aa15.49■□□□□ 0.07
COPS4-211ENST00000511891 NCBP3Q53F19 620 aaKnown RBP15.48■□□□□ 0.07
COPS4-211ENST00000511891 MAST1Q9Y2H9 1570 aa15.48■□□□□ 0.07
COPS4-211ENST00000511891 PTPN23Q9H3S7 1636 aa15.46■□□□□ 0.06
COPS4-211ENST00000511891 WASHC2CQ9Y4E1 1318 aa15.45■□□□□ 0.06
COPS4-211ENST00000511891 FGD6Q6ZV73 1430 aa15.45■□□□□ 0.06
COPS4-211ENST00000511891 FBXO31Q5XUX0 539 aaPredicted RBP15.45■□□□□ 0.06
COPS4-211ENST00000511891 FBXO41Q8TF61 875 aa15.45■□□□□ 0.06
COPS4-211ENST00000511891 ABCC5O15440 1437 aa15.44■□□□□ 0.06
COPS4-211ENST00000511891 NCOA1Q15788 1441 aa15.43■□□□□ 0.06
COPS4-211ENST00000511891 KDM5DQ9BY66 1539 aa15.43■□□□□ 0.06
COPS4-211ENST00000511891 MYO3AQ8NEV4 1616 aa15.43■□□□□ 0.06
COPS4-211ENST00000511891 CAMSAP1Q5T5Y3 1602 aa15.43■□□□□ 0.06
COPS4-211ENST00000511891 CERKQ8TCT0 537 aa15.42■□□□□ 0.06
COPS4-211ENST00000511891 TCOF1Q13428 1488 aaKnown RBP15.41■□□□□ 0.06
COPS4-211ENST00000511891 RRP7BPQ9NSQ0 103 aa15.41■□□□□ 0.06
COPS4-211ENST00000511891 DAPK1P53355 1430 aa15.41■□□□□ 0.06
COPS4-211ENST00000511891 NCKAP5LQ9HCH0 1330 aa15.41■□□□□ 0.06
COPS4-211ENST00000511891 CEP170BQ9Y4F5 1589 aaPredicted RBP15.41■□□□□ 0.06
COPS4-211ENST00000511891 PZPP20742 1482 aa15.4■□□□□ 0.06
COPS4-211ENST00000511891 KIF15Q9NS87 1388 aa15.4■□□□□ 0.06
COPS4-211ENST00000511891 CHIC2Q9UKJ5 165 aa15.4■□□□□ 0.06
COPS4-211ENST00000511891 PTPRTO14522 1441 aa15.4■□□□□ 0.06
COPS4-211ENST00000511891 SHANK2Q9UPX8 1470 aa15.4■□□□□ 0.06
COPS4-211ENST00000511891 RNF17Q9BXT8 1623 aaKnown RBP15.39■□□□□ 0.05
COPS4-211ENST00000511891 TNRQ92752 1358 aa15.39■□□□□ 0.05
COPS4-211ENST00000511891 FAM135AQ9P2D6 1515 aa15.39■□□□□ 0.05
COPS4-211ENST00000511891 CROCC2H7BZ55 1655 aa15.39■□□□□ 0.05
COPS4-211ENST00000511891 ZNF142P52746 1687 aaPredicted RBP15.39■□□□□ 0.05
COPS4-211ENST00000511891 DNMT1P26358 1616 aaKnown RBP15.39■□□□□ 0.05
COPS4-211ENST00000511891 DUOX2Q9NRD8 1548 aa15.38■□□□□ 0.05
COPS4-211ENST00000511891 ABCC3O15438 1527 aa15.38■□□□□ 0.05
COPS4-211ENST00000511891 MROH1Q8NDA8 1641 aa15.37■□□□□ 0.05
COPS4-211ENST00000511891 EIF2AK4Q9P2K8 1649 aaKnown RBP15.37■□□□□ 0.05
COPS4-211ENST00000511891 FAM50AQ14320 339 aaKnown RBP15.37■□□□□ 0.05
COPS4-211ENST00000511891 A2ML1A8K2U0 1454 aa15.37■□□□□ 0.05
COPS4-211ENST00000511891 PLA2R1Q13018 1463 aa15.34■□□□□ 0.05
COPS4-211ENST00000511891 PPARGC1BQ86YN6 1023 aaKnown RBP15.34■□□□□ 0.05
COPS4-211ENST00000511891 ERBINQ96RT1 1412 aa15.34■□□□□ 0.05
COPS4-211ENST00000511891 PKD2Q13563 968 aa15.33■□□□□ 0.04
COPS4-211ENST00000511891 CEP152O94986 1710 aa15.33■□□□□ 0.04
COPS4-211ENST00000511891 ANKRD30AQ9BXX3 1397 aa15.33■□□□□ 0.04
COPS4-211ENST00000511891 ZC3H13Q5T200 1668 aaKnown RBP15.32■□□□□ 0.04
COPS4-211ENST00000511891 ERVK-7P63135 1459 aa15.3■□□□□ 0.04
COPS4-211ENST00000511891 LTBP4Q8N2S1 1624 aa15.3■□□□□ 0.04
COPS4-211ENST00000511891 ZNF335Q9H4Z2 1342 aaPredicted RBP15.3■□□□□ 0.04
COPS4-211ENST00000511891 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.3■□□□□ 0.04
COPS4-211ENST00000511891 SPATA31D1Q6ZQQ2 1576 aa15.29■□□□□ 0.04
COPS4-211ENST00000511891 PRDM15P57071 1507 aaPredicted RBP15.29■□□□□ 0.04
COPS4-211ENST00000511891 NLRP1Q9C000 1473 aa15.29■□□□□ 0.04
COPS4-211ENST00000511891 DSG3P32926 999 aa15.29■□□□□ 0.04
COPS4-211ENST00000511891 NPM3O75607 178 aaKnown RBP15.28■□□□□ 0.04
COPS4-211ENST00000511891 CAPN15O75808 1086 aa15.28■□□□□ 0.04
COPS4-211ENST00000511891 UGGT1Q9NYU2 1555 aa15.28■□□□□ 0.04
COPS4-211ENST00000511891 ADGRL2O95490 1459 aa15.27■□□□□ 0.04
COPS4-211ENST00000511891 CFAP65Q6ZU64 1925 aaKnown RBP15.27■□□□□ 0.04
COPS4-211ENST00000511891 SPINK5Q9NQ38 1064 aaPredicted RBP15.27■□□□□ 0.04
COPS4-211ENST00000511891 U3KPZ7 1027 aaPredicted RBP15.27■□□□□ 0.04
COPS4-211ENST00000511891 DEPDC5O75140 1603 aa15.26■□□□□ 0.03
COPS4-211ENST00000511891 THEMISQ8N1K5 641 aaPredicted RBP15.26■□□□□ 0.03
COPS4-211ENST00000511891 KANK1Q14678 1352 aa15.25■□□□□ 0.03
COPS4-211ENST00000511891 NEURL4Q96JN8 1562 aa15.25■□□□□ 0.03
COPS4-211ENST00000511891 ANKLE2Q86XL3 938 aa15.25■□□□□ 0.03
COPS4-211ENST00000511891 ARHGAP31Q2M1Z3 1444 aa15.24■□□□□ 0.03
COPS4-211ENST00000511891 POLR1AO95602 1720 aaPredicted RBP15.23■□□□□ 0.03
COPS4-211ENST00000511891 ANKRD50Q9ULJ7 1429 aa15.23■□□□□ 0.03
COPS4-211ENST00000511891 ITGAEP38570 1179 aa15.22■□□□□ 0.03
COPS4-211ENST00000511891 VWDEQ8N2E2 1590 aa15.22■□□□□ 0.03
COPS4-211ENST00000511891 NPHP4O75161 1426 aaPredicted RBP15.2■□□□□ 0.02
COPS4-211ENST00000511891 LMTK2Q8IWU2 1503 aa15.2■□□□□ 0.02
COPS4-211ENST00000511891 UBR1Q8IWV7 1749 aa15.18■□□□□ 0.02
COPS4-211ENST00000511891 MED14O60244 1454 aa15.17■□□□□ 0.02
COPS4-211ENST00000511891 IQSEC2Q5JU85 1478 aa15.17■□□□□ 0.02
COPS4-211ENST00000511891 EFCAB6Q5THR3 1501 aa15.17■□□□□ 0.02
COPS4-211ENST00000511891 ROCK1Q13464 1354 aa15.16■□□□□ 0.02
COPS4-211ENST00000511891 LTKP29376 864 aa15.16■□□□□ 0.02
COPS4-211ENST00000511891 IDI1Q13907 227 aa15.16■□□□□ 0.02
COPS4-211ENST00000511891 PIK3C2BO00750 1634 aa15.16■□□□□ 0.02
COPS4-211ENST00000511891 SYNMO15061 1565 aa15.15■□□□□ 0.02
COPS4-211ENST00000511891 STAG3Q9UJ98 1225 aa15.15■□□□□ 0.02
COPS4-211ENST00000511891 NOS1P29475 1434 aa15.15■□□□□ 0.02
COPS4-211ENST00000511891 IQGAP1P46940 1657 aa15.15■□□□□ 0.02
COPS4-211ENST00000511891 UBAP1LF5GYI3 381 aa15.14■□□□□ 0.01
COPS4-211ENST00000511891 TXNDC2Q86VQ3 553 aa15.14■□□□□ 0.01
COPS4-211ENST00000511891 SCAF11Q99590 1463 aaKnown RBP15.14■□□□□ 0.01
COPS4-211ENST00000511891 ARHGAP23Q9P227 1491 aa15.14■□□□□ 0.01
COPS4-211ENST00000511891 SLIT1O75093 1534 aa15.12■□□□□ 0.01
COPS4-211ENST00000511891 UNC13BO14795 1591 aa15.12■□□□□ 0.01
COPS4-211ENST00000511891 TMEM2Q9UHN6 1383 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms