RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 PTPREP23469 700 aa8.5□□□□□ -1.05
CALCOCO2-220ENST00000511816 MAP3K7O43318 606 aa8.49□□□□□ -1.05
CALCOCO2-220ENST00000511816 GPIHBP1Q8IV16 184 aa8.49□□□□□ -1.05
CALCOCO2-220ENST00000511816 ZC3H15Q8WU90 426 aaKnown RBP8.49□□□□□ -1.05
CALCOCO2-220ENST00000511816 PCDHGA10Q9Y5H3 936 aa8.49□□□□□ -1.05
CALCOCO2-220ENST00000511816 MLLT3P42568 568 aaPredicted RBP8.48□□□□□ -1.05
CALCOCO2-220ENST00000511816 ARHGAP33O14559 1287 aa8.47□□□□□ -1.05
CALCOCO2-220ENST00000511816 KCNK17Q96T54 332 aa8.47□□□□□ -1.05
CALCOCO2-220ENST00000511816 BCL2L12Q9HB09 334 aa8.47□□□□□ -1.05
CALCOCO2-220ENST00000511816 EN1Q05925 392 aaPredicted RBP8.46□□□□□ -1.06
CALCOCO2-220ENST00000511816 RBM33Q96EV2 1170 aaKnown RBP8.46□□□□□ -1.06
CALCOCO2-220ENST00000511816 RBM26Q5T8P6 1007 aaKnown RBP8.44□□□□□ -1.06
CALCOCO2-220ENST00000511816 ADAM33Q9BZ11 813 aa8.44□□□□□ -1.06
CALCOCO2-220ENST00000511816 KRI1Q8N9T8 703 aaKnown RBP8.43□□□□□ -1.06
CALCOCO2-220ENST00000511816 CERKQ8TCT0 537 aa8.43□□□□□ -1.06
CALCOCO2-220ENST00000511816 STAC3Q96MF2 364 aa8.43□□□□□ -1.06
CALCOCO2-220ENST00000511816 ZMYND10O75800 440 aa8.42□□□□□ -1.06
CALCOCO2-220ENST00000511816 C6orf132Q5T0Z8 1188 aa8.42□□□□□ -1.06
CALCOCO2-220ENST00000511816 PPP1R3GB7ZBB8 358 aa8.41□□□□□ -1.06
CALCOCO2-220ENST00000511816 OSBPP22059 807 aa8.41□□□□□ -1.06
CALCOCO2-220ENST00000511816 ANKRD13DQ6ZTN6 518 aa8.41□□□□□ -1.06
CALCOCO2-220ENST00000511816 AXIN2Q9Y2T1 843 aa8.41□□□□□ -1.06
CALCOCO2-220ENST00000511816 NUTM2FA1L443 756 aa8.4□□□□□ -1.06
CALCOCO2-220ENST00000511816 LSM11P83369 360 aaKnown RBP eCLIP8.4□□□□□ -1.06
CALCOCO2-220ENST00000511816 BARGINQ6ZT62 677 aa8.4□□□□□ -1.06
CALCOCO2-220ENST00000511816 PSEN2P49810 448 aa8.39□□□□□ -1.07
CALCOCO2-220ENST00000511816 SLC24A3Q9HC58 644 aa8.38□□□□□ -1.07
CALCOCO2-220ENST00000511816 TSR1Q2NL82 804 aaKnown RBP8.37□□□□□ -1.07
CALCOCO2-220ENST00000511816 DAXXQ9UER7 740 aaPredicted RBP8.37□□□□□ -1.07
CALCOCO2-220ENST00000511816 TK2O00142 265 aa8.36□□□□□ -1.07
CALCOCO2-220ENST00000511816 AK7Q96M32 723 aa8.36□□□□□ -1.07
CALCOCO2-220ENST00000511816 FCHSD2O94868 740 aa8.35□□□□□ -1.07
CALCOCO2-220ENST00000511816 ADGRD1Q6QNK2 874 aa8.35□□□□□ -1.07
CALCOCO2-220ENST00000511816 NBPF3Q9H094 633 aa8.35□□□□□ -1.07
CALCOCO2-220ENST00000511816 HIC1Q14526 733 aa8.34□□□□□ -1.07
CALCOCO2-220ENST00000511816 DMRTA1Q5VZB9 504 aa8.34□□□□□ -1.07
CALCOCO2-220ENST00000511816 PACS2Q86VP3 889 aa8.34□□□□□ -1.07
CALCOCO2-220ENST00000511816 SLC4A5Q9BY07 1137 aa8.34□□□□□ -1.07
CALCOCO2-220ENST00000511816 POTEEQ6S8J3 1075 aa8.33□□□□□ -1.08
CALCOCO2-220ENST00000511816 ZBED2Q9BTP6 218 aa8.33□□□□□ -1.08
CALCOCO2-220ENST00000511816 MINK1Q8N4C8 1332 aaPredicted RBP8.32□□□□□ -1.08
CALCOCO2-220ENST00000511816 GNPATO15228 680 aa8.32□□□□□ -1.08
CALCOCO2-220ENST00000511816 ONECUT3O60422 494 aaPredicted RBP8.32□□□□□ -1.08
CALCOCO2-220ENST00000511816 COL9A1P20849 921 aa8.32□□□□□ -1.08
CALCOCO2-220ENST00000511816 PRSS12P56730 875 aa8.32□□□□□ -1.08
CALCOCO2-220ENST00000511816 NEUROD2Q15784 382 aa8.32□□□□□ -1.08
CALCOCO2-220ENST00000511816 RBM27Q9P2N5 1060 aaKnown RBP8.32□□□□□ -1.08
CALCOCO2-220ENST00000511816 GOLGA8CPA6NN73 597 aa8.31□□□□□ -1.08
CALCOCO2-220ENST00000511816 TRIM6-TRIM34B2RNG4 842 aa8.31□□□□□ -1.08
CALCOCO2-220ENST00000511816 CDCA7LQ96GN5 454 aa8.31□□□□□ -1.08
CALCOCO2-220ENST00000511816 CDHR5Q9HBB8 845 aa8.31□□□□□ -1.08
CALCOCO2-220ENST00000511816 RABGEF1Q9UJ41 708 aa8.31□□□□□ -1.08
CALCOCO2-220ENST00000511816 VPS9D1Q9Y2B5 631 aa8.31□□□□□ -1.08
CALCOCO2-220ENST00000511816 NBPF26B4DH59 902 aa8.3□□□□□ -1.08
CALCOCO2-220ENST00000511816 PRIM1P49642 420 aaKnown RBP8.3□□□□□ -1.08
CALCOCO2-220ENST00000511816 PTGDRQ13258 359 aa8.3□□□□□ -1.08
CALCOCO2-220ENST00000511816 TMEM132AQ24JP5 1023 aa8.3□□□□□ -1.08
CALCOCO2-220ENST00000511816 MRPL50Q8N5N7 158 aaKnown RBP8.3□□□□□ -1.08
CALCOCO2-220ENST00000511816 MAP2K5Q13163 448 aa8.29□□□□□ -1.08
CALCOCO2-220ENST00000511816 PROX2Q3B8N5 592 aa8.29□□□□□ -1.08
CALCOCO2-220ENST00000511816 BRPF1P55201 1214 aaPredicted RBP8.27□□□□□ -1.09
CALCOCO2-220ENST00000511816 KIAA1468Q9P260 1216 aa8.27□□□□□ -1.09
CALCOCO2-220ENST00000511816 GPR37O15354 613 aa8.26□□□□□ -1.09
CALCOCO2-220ENST00000511816 HDGFP51858 240 aaKnown RBP8.26□□□□□ -1.09
CALCOCO2-220ENST00000511816 PADI6Q6TGC4 694 aa8.26□□□□□ -1.09
CALCOCO2-220ENST00000511816 MYT1LQ9UL68 1186 aa8.26□□□□□ -1.09
CALCOCO2-220ENST00000511816 IRF6O14896 467 aa8.25□□□□□ -1.09
CALCOCO2-220ENST00000511816 SLC4A3P48751 1232 aa8.25□□□□□ -1.09
CALCOCO2-220ENST00000511816 LAPTM4BQ86VI4 370 aa8.25□□□□□ -1.09
CALCOCO2-220ENST00000511816 TRIM66O15016 1216 aa8.24□□□□□ -1.09
CALCOCO2-220ENST00000511816 RBM46Q8TBY0 533 aaKnown RBP8.24□□□□□ -1.09
CALCOCO2-220ENST00000511816 NPDC1Q9NQX5 325 aaPredicted RBP8.24□□□□□ -1.09
CALCOCO2-220ENST00000511816 PNMA3Q9UL41 463 aa8.24□□□□□ -1.09
CALCOCO2-220ENST00000511816 HRO43593 1189 aa8.23□□□□□ -1.09
CALCOCO2-220ENST00000511816 TSKSQ9UJT2 592 aa8.23□□□□□ -1.09
CALCOCO2-220ENST00000511816 OATP04181 439 aa8.22□□□□□ -1.09
CALCOCO2-220ENST00000511816 PDE4DQ08499 809 aa8.22□□□□□ -1.09
CALCOCO2-220ENST00000511816 FAM98CQ17RN3 349 aaKnown RBP8.22□□□□□ -1.09
CALCOCO2-220ENST00000511816 ANKK1Q8NFD2 765 aa8.22□□□□□ -1.09
CALCOCO2-220ENST00000511816 TATDN2Q93075 761 aa8.22□□□□□ -1.09
CALCOCO2-220ENST00000511816 CCDC102AQ96A19 550 aa8.22□□□□□ -1.09
CALCOCO2-220ENST00000511816 NUDT18Q6ZVK8 323 aa8.21□□□□□ -1.1
CALCOCO2-220ENST00000511816 RNF166Q96A37 237 aaPredicted RBP8.21□□□□□ -1.1
CALCOCO2-220ENST00000511816 SEPT9Q9UHD8 586 aaPredicted RBP8.21□□□□□ -1.1
CALCOCO2-220ENST00000511816 BHMG1C9JSJ3 638 aaPredicted RBP8.2□□□□□ -1.1
CALCOCO2-220ENST00000511816 NECTIN2Q92692 538 aa8.19□□□□□ -1.1
CALCOCO2-220ENST00000511816 WNT2BQ93097 391 aa8.19□□□□□ -1.1
CALCOCO2-220ENST00000511816 AMHR2Q16671 573 aa8.18□□□□□ -1.1
CALCOCO2-220ENST00000511816 ERICH6Q7L0X2 663 aa8.18□□□□□ -1.1
CALCOCO2-220ENST00000511816 TTC13Q8NBP0 860 aa8.18□□□□□ -1.1
CALCOCO2-220ENST00000511816 KCTD12Q96CX2 325 aaKnown RBP8.18□□□□□ -1.1
CALCOCO2-220ENST00000511816 ZFRQ96KR1 1074 aaKnown RBP8.18□□□□□ -1.1
CALCOCO2-220ENST00000511816 FECHP22830 423 aa8.17□□□□□ -1.1
CALCOCO2-220ENST00000511816 TTLL12Q14166 644 aaPredicted RBP8.17□□□□□ -1.1
CALCOCO2-220ENST00000511816 LRCH3Q96II8 777 aa8.17□□□□□ -1.1
CALCOCO2-220ENST00000511816 KDM4CQ9H3R0 1056 aa8.17□□□□□ -1.1
CALCOCO2-220ENST00000511816 SMAPO00193 183 aa8.16□□□□□ -1.1
CALCOCO2-220ENST00000511816 DNAJB2P25686 324 aa8.16□□□□□ -1.1
CALCOCO2-220ENST00000511816 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.16□□□□□ -1.1
CALCOCO2-220ENST00000511816 ADGRG1Q9Y653 693 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 330.2 ms