RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 NUP153P49790 1475 aaKnown RBP11.26□□□□□ -0.61
COPS4-209ENST00000511653 ADAMTSL3P82987 1691 aa11.26□□□□□ -0.61
COPS4-209ENST00000511653 FHOD3Q2V2M9 1422 aa11.24□□□□□ -0.61
COPS4-209ENST00000511653 MS4A3Q96HJ5 214 aa11.24□□□□□ -0.61
COPS4-209ENST00000511653 PHF8Q9UPP1 1060 aa11.24□□□□□ -0.61
COPS4-209ENST00000511653 BCORL1Q5H9F3 1711 aa11.24□□□□□ -0.61
COPS4-209ENST00000511653 FBXO22Q8NEZ5 403 aa11.24□□□□□ -0.61
COPS4-209ENST00000511653 NEO1Q92859 1461 aa11.23□□□□□ -0.61
COPS4-209ENST00000511653 RICTORQ6R327 1708 aa11.23□□□□□ -0.61
COPS4-209ENST00000511653 MADDQ8WXG6 1647 aa11.23□□□□□ -0.61
COPS4-209ENST00000511653 RAPGEF3O95398 923 aa11.22□□□□□ -0.61
COPS4-209ENST00000511653 RYDENQ9NUL5 291 aaKnown RBP11.22□□□□□ -0.61
COPS4-209ENST00000511653 ARHGEF40Q8TER5 1519 aa11.21□□□□□ -0.61
COPS4-209ENST00000511653 PTPRMP28827 1452 aa11.21□□□□□ -0.61
COPS4-209ENST00000511653 TTC37Q6PGP7 1564 aa11.21□□□□□ -0.62
COPS4-209ENST00000511653 RANGAP1P46060 587 aaPredicted RBP11.2□□□□□ -0.62
COPS4-209ENST00000511653 SIGLEC1Q9BZZ2 1709 aa11.2□□□□□ -0.62
COPS4-209ENST00000511653 PHLDB1Q86UU1 1377 aa11.2□□□□□ -0.62
COPS4-209ENST00000511653 EVX2Q03828 476 aa11.2□□□□□ -0.62
COPS4-209ENST00000511653 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.19□□□□□ -0.62
COPS4-209ENST00000511653 EEA1Q15075 1411 aa11.18□□□□□ -0.62
COPS4-209ENST00000511653 RIMS1Q86UR5 1692 aaKnown RBP11.18□□□□□ -0.62
COPS4-209ENST00000511653 EFCAB5A4FU69 1503 aa11.18□□□□□ -0.62
COPS4-209ENST00000511653 FAM9AQ8IZU1 332 aaPredicted RBP11.17□□□□□ -0.62
COPS4-209ENST00000511653 MS4A4AQ96JQ5 239 aa11.17□□□□□ -0.62
COPS4-209ENST00000511653 CFAP74Q9C0B2 1584 aa11.17□□□□□ -0.62
COPS4-209ENST00000511653 CDK13Q14004 1512 aaKnown RBP11.17□□□□□ -0.62
COPS4-209ENST00000511653 TMEM106CQ9BVX2 250 aa11.16□□□□□ -0.62
COPS4-209ENST00000511653 PCF11O94913 1555 aaKnown RBP11.15□□□□□ -0.62
COPS4-209ENST00000511653 FANCAO15360 1455 aa11.15□□□□□ -0.62
COPS4-209ENST00000511653 ZMYM4Q5VZL5 1548 aa11.15□□□□□ -0.62
COPS4-209ENST00000511653 DENND4BO75064 1496 aaPredicted RBP11.15□□□□□ -0.63
COPS4-209ENST00000511653 TPRNQ4KMQ1 711 aa11.14□□□□□ -0.63
COPS4-209ENST00000511653 AKNAQ7Z591 1439 aa11.14□□□□□ -0.63
COPS4-209ENST00000511653 LMTK3Q96Q04 1460 aa11.14□□□□□ -0.63
COPS4-209ENST00000511653 SOX12O15370 315 aa11.14□□□□□ -0.63
COPS4-209ENST00000511653 NLRP6P59044 892 aa11.13□□□□□ -0.63
COPS4-209ENST00000511653 YEATS2Q9ULM3 1422 aa11.12□□□□□ -0.63
COPS4-209ENST00000511653 ARID4BQ4LE39 1312 aaPredicted RBP11.12□□□□□ -0.63
COPS4-209ENST00000511653 ZFYVE16Q7Z3T8 1539 aa11.12□□□□□ -0.63
COPS4-209ENST00000511653 FER1L4A9Z1Z3 1794 aa11.12□□□□□ -0.63
COPS4-209ENST00000511653 HECW1Q76N89 1606 aa11.11□□□□□ -0.63
COPS4-209ENST00000511653 GALR2O43603 387 aaPredicted RBP11.11□□□□□ -0.63
COPS4-209ENST00000511653 LRRIQ1Q96JM4 1722 aa11.11□□□□□ -0.63
COPS4-209ENST00000511653 MYO5CQ9NQX4 1742 aa11.11□□□□□ -0.63
COPS4-209ENST00000511653 PLEKHD1A6NEE1 506 aa11.11□□□□□ -0.63
COPS4-209ENST00000511653 KIF14Q15058 1648 aa11.1□□□□□ -0.63
COPS4-209ENST00000511653 NBR1Q14596 966 aa11.1□□□□□ -0.63
COPS4-209ENST00000511653 TTLL13PA6NNM8 815 aa11.08□□□□□ -0.64
COPS4-209ENST00000511653 BMP2KQ9NSY1 1161 aaPredicted RBP11.08□□□□□ -0.64
COPS4-209ENST00000511653 POGZQ7Z3K3 1410 aa11.08□□□□□ -0.64
COPS4-209ENST00000511653 KCNV2Q8TDN2 545 aa11.08□□□□□ -0.64
COPS4-209ENST00000511653 ARHGAP35Q9NRY4 1499 aa11.07□□□□□ -0.64
COPS4-209ENST00000511653 MAGI2Q86UL8 1455 aa11.06□□□□□ -0.64
COPS4-209ENST00000511653 PLCH2O75038 1416 aa11.06□□□□□ -0.64
COPS4-209ENST00000511653 HAX1O00165 279 aa11.06□□□□□ -0.64
COPS4-209ENST00000511653 SCAPERQ9BY12 1400 aa11.05□□□□□ -0.64
COPS4-209ENST00000511653 FBXO41Q8TF61 875 aa11.05□□□□□ -0.64
COPS4-209ENST00000511653 NCKAP5LQ9HCH0 1330 aa11.04□□□□□ -0.64
COPS4-209ENST00000511653 TIE1P35590 1138 aa11.04□□□□□ -0.64
COPS4-209ENST00000511653 HSPA2P54652 639 aa11.04□□□□□ -0.64
COPS4-209ENST00000511653 ARHGEF12Q9NZN5 1544 aa11.04□□□□□ -0.64
COPS4-209ENST00000511653 FMN1Q68DA7 1419 aa11.03□□□□□ -0.64
COPS4-209ENST00000511653 CDC42BPBQ9Y5S2 1711 aa11.03□□□□□ -0.64
COPS4-209ENST00000511653 KDM5CP41229 1560 aa11.02□□□□□ -0.64
COPS4-209ENST00000511653 MLECQ14165 292 aa11.02□□□□□ -0.64
COPS4-209ENST00000511653 PREX1Q8TCU6 1659 aa11.02□□□□□ -0.65
COPS4-209ENST00000511653 ARHGAP5Q13017 1502 aa11.01□□□□□ -0.65
COPS4-209ENST00000511653 ATP10AO60312 1499 aa11.01□□□□□ -0.65
COPS4-209ENST00000511653 ABCA6Q8N139 1617 aa11.01□□□□□ -0.65
COPS4-209ENST00000511653 UBTFP17480 764 aaKnown RBP11.01□□□□□ -0.65
COPS4-209ENST00000511653 GOLGA2Q08379 1002 aa11.01□□□□□ -0.65
COPS4-209ENST00000511653 ATP1B4Q9UN42 357 aaPredicted RBP11.01□□□□□ -0.65
COPS4-209ENST00000511653 TROQ12816 1431 aaPredicted RBP11.01□□□□□ -0.65
COPS4-209ENST00000511653 C9orf84Q5VXU9 1444 aa11.01□□□□□ -0.65
COPS4-209ENST00000511653 DIP2CQ9Y2E4 1556 aa11.01□□□□□ -0.65
COPS4-209ENST00000511653 PREX2Q70Z35 1606 aa11□□□□□ -0.65
COPS4-209ENST00000511653 MKRN3Q13064 507 aaKnown RBP11□□□□□ -0.65
COPS4-209ENST00000511653 WDR70Q9NW82 654 aa11□□□□□ -0.65
COPS4-209ENST00000511653 TRIM35Q9UPQ4 493 aa11□□□□□ -0.65
COPS4-209ENST00000511653 ZNF518AQ6AHZ1 1483 aa10.99□□□□□ -0.65
COPS4-209ENST00000511653 ITSN2Q9NZM3 1697 aa10.99□□□□□ -0.65
COPS4-209ENST00000511653 DPY19L2Q6NUT2 758 aa10.98□□□□□ -0.65
COPS4-209ENST00000511653 CDC42BPAQ5VT25 1732 aa10.98□□□□□ -0.65
COPS4-209ENST00000511653 EFCAB2Q5VUJ9 269 aa10.98□□□□□ -0.65
COPS4-209ENST00000511653 STRCQ7RTU9 1775 aa10.97□□□□□ -0.65
COPS4-209ENST00000511653 ABCC1P33527 1531 aa10.97□□□□□ -0.65
COPS4-209ENST00000511653 ATN1P54259 1190 aaPredicted RBP10.97□□□□□ -0.65
COPS4-209ENST00000511653 C3P01024 1663 aa10.96□□□□□ -0.65
COPS4-209ENST00000511653 REREQ9P2R6 1566 aa10.96□□□□□ -0.65
COPS4-209ENST00000511653 CLIP1P30622 1438 aa10.96□□□□□ -0.66
COPS4-209ENST00000511653 SETD1BQ9UPS6 1966 aaKnown RBP10.96□□□□□ -0.66
COPS4-209ENST00000511653 AFAP1Q8N556 730 aa10.95□□□□□ -0.66
COPS4-209ENST00000511653 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.95□□□□□ -0.66
COPS4-209ENST00000511653 KIDINS220Q9ULH0 1771 aa10.95□□□□□ -0.66
COPS4-209ENST00000511653 CEBPAP49715 358 aaPredicted RBP10.95□□□□□ -0.66
COPS4-209ENST00000511653 CDK11AQ9UQ88 783 aaPredicted RBP10.95□□□□□ -0.66
COPS4-209ENST00000511653 LARP6Q9BRS8 491 aaKnown RBP10.94□□□□□ -0.66
COPS4-209ENST00000511653 CRISPLD2Q9H0B8 497 aa10.94□□□□□ -0.66
COPS4-209ENST00000511653 TRAPPC8Q9Y2L5 1435 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms