RNA–Protein interactions for RNA: ENST00000511498.1

IFT122-223, Transcript of intraflagellar transport 122, human

TSL 4

Gene IFT122, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFT122-223	ENST00000511498	C9orf84	Q5VXU9	1444 aa		13.47	□□□□□ -0.25
IFT122-223	ENST00000511498	PLXNC1	O60486	1568 aa		13.46	□□□□□ -0.25
IFT122-223	ENST00000511498	CEBPA	P49715	358 aa	Predicted RBP	13.46	□□□□□ -0.25
IFT122-223	ENST00000511498	SIN3A	Q96ST3	1273 aa		13.46	□□□□□ -0.25
IFT122-223	ENST00000511498	ZNF644	Q9H582	1327 aa	Predicted RBP	13.45	□□□□□ -0.26
IFT122-223	ENST00000511498	ARHGAP5	Q13017	1502 aa		13.45	□□□□□ -0.26
IFT122-223	ENST00000511498	NEUROD1	Q13562	356 aa		13.45	□□□□□ -0.26
IFT122-223	ENST00000511498	MLEC	Q14165	292 aa		13.45	□□□□□ -0.26
IFT122-223	ENST00000511498	PPP1R15A	O75807	674 aa	Predicted RBP	13.44	□□□□□ -0.26
IFT122-223	ENST00000511498	RSPH4A	Q5TD94	716 aa		13.44	□□□□□ -0.26
IFT122-223	ENST00000511498	TRIM52	Q96A61	297 aa		13.44	□□□□□ -0.26
IFT122-223	ENST00000511498	MBD5	Q9P267	1494 aa		13.43	□□□□□ -0.26
IFT122-223	ENST00000511498	CFAP74	Q9C0B2	1584 aa		13.43	□□□□□ -0.26
IFT122-223	ENST00000511498	PZP	P20742	1482 aa		13.42	□□□□□ -0.26
IFT122-223	ENST00000511498	RPRD2	Q5VT52	1461 aa	Known RBP	13.42	□□□□□ -0.26
IFT122-223	ENST00000511498	ANKRD50	Q9ULJ7	1429 aa		13.42	□□□□□ -0.26
IFT122-223	ENST00000511498	KIAA1107	Q9UPP5	1409 aa		13.42	□□□□□ -0.26
IFT122-223	ENST00000511498	CENPB	P07199	599 aa	Predicted RBP	13.42	□□□□□ -0.26
IFT122-223	ENST00000511498	SYCP2	Q9BX26	1530 aa		13.42	□□□□□ -0.26
IFT122-223	ENST00000511498	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.41	□□□□□ -0.26
IFT122-223	ENST00000511498	MPHOSPH9	Q99550	1183 aa		13.41	□□□□□ -0.26
IFT122-223	ENST00000511498	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.41	□□□□□ -0.26
IFT122-223	ENST00000511498	UNC13B	O14795	1591 aa		13.41	□□□□□ -0.26
IFT122-223	ENST00000511498	C3	P01024	1663 aa		13.4	□□□□□ -0.26
IFT122-223	ENST00000511498	ABCC1	P33527	1531 aa		13.39	□□□□□ -0.27
IFT122-223	ENST00000511498	ANKRD30B	Q9BXX2	1392 aa		13.38	□□□□□ -0.27
IFT122-223	ENST00000511498	TSPY4	P0CV99	314 aa		13.38	□□□□□ -0.27
IFT122-223	ENST00000511498	TSPY10	P0CW01	314 aa		13.38	□□□□□ -0.27
IFT122-223	ENST00000511498	ATP10A	O60312	1499 aa		13.37	□□□□□ -0.27
IFT122-223	ENST00000511498	CAMSAP1	Q5T5Y3	1602 aa		13.37	□□□□□ -0.27
IFT122-223	ENST00000511498	PLCH2	O75038	1416 aa		13.37	□□□□□ -0.27
IFT122-223	ENST00000511498	POLR1A	O95602	1720 aa	Predicted RBP	13.36	□□□□□ -0.27
IFT122-223	ENST00000511498	KIF15	Q9NS87	1388 aa		13.36	□□□□□ -0.27
IFT122-223	ENST00000511498	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.35	□□□□□ -0.27
IFT122-223	ENST00000511498	TRAPPC8	Q9Y2L5	1435 aa		13.35	□□□□□ -0.27
IFT122-223	ENST00000511498	DUOX2	Q9NRD8	1548 aa		13.34	□□□□□ -0.27
IFT122-223	ENST00000511498	MIER1	Q8N108	512 aa		13.34	□□□□□ -0.27
IFT122-223	ENST00000511498	RGS17	Q9UGC6	210 aa	Predicted RBP	13.34	□□□□□ -0.27
IFT122-223	ENST00000511498	IQGAP3	Q86VI3	1631 aa		13.34	□□□□□ -0.27
IFT122-223	ENST00000511498	ALK	Q9UM73	1620 aa		13.33	□□□□□ -0.28
IFT122-223	ENST00000511498	ERBIN	Q96RT1	1412 aa		13.32	□□□□□ -0.28
IFT122-223	ENST00000511498	PLA2R1	Q13018	1463 aa		13.31	□□□□□ -0.28
IFT122-223	ENST00000511498	FAM135A	Q9P2D6	1515 aa		13.3	□□□□□ -0.28
IFT122-223	ENST00000511498	RERE	Q9P2R6	1566 aa		13.3	□□□□□ -0.28
IFT122-223	ENST00000511498	PIP4K2B	P78356	416 aa		13.29	□□□□□ -0.28
IFT122-223	ENST00000511498	EFCAB2	Q5VUJ9	269 aa		13.29	□□□□□ -0.28
IFT122-223	ENST00000511498	SCAF1	Q9H7N4	1312 aa	Known RBP	13.29	□□□□□ -0.28
IFT122-223	ENST00000511498	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.29	□□□□□ -0.28
IFT122-223	ENST00000511498	INO80	Q9ULG1	1556 aa	Predicted RBP	13.28	□□□□□ -0.28
IFT122-223	ENST00000511498	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
IFT122-223	ENST00000511498	NUP155	O75694	1391 aa		13.28	□□□□□ -0.28
IFT122-223	ENST00000511498	EIF2AK4	Q9P2K8	1649 aa	Known RBP	13.28	□□□□□ -0.28
IFT122-223	ENST00000511498	TOM1	O60784	492 aa		13.27	□□□□□ -0.29
IFT122-223	ENST00000511498	CPS1	P31327	1500 aa		13.27	□□□□□ -0.29
IFT122-223	ENST00000511498	ZNF142	P52746	1687 aa	Predicted RBP	13.27	□□□□□ -0.29
IFT122-223	ENST00000511498	DEPDC5	O75140	1603 aa		13.26	□□□□□ -0.29
IFT122-223	ENST00000511498	AGL	P35573	1532 aa		13.26	□□□□□ -0.29
IFT122-223	ENST00000511498	NPAT	Q14207	1427 aa		13.25	□□□□□ -0.29
IFT122-223	ENST00000511498	SCAPER	Q9BY12	1400 aa		13.25	□□□□□ -0.29
IFT122-223	ENST00000511498	NCKAP5L	Q9HCH0	1330 aa		13.25	□□□□□ -0.29
IFT122-223	ENST00000511498	PKD2	Q13563	968 aa		13.24	□□□□□ -0.29
IFT122-223	ENST00000511498	L3MBTL2	Q969R5	705 aa		13.24	□□□□□ -0.29
IFT122-223	ENST00000511498	SETD1A	O15047	1707 aa	Known RBP	13.24	□□□□□ -0.29
IFT122-223	ENST00000511498	DIP2C	Q9Y2E4	1556 aa		13.24	□□□□□ -0.29
IFT122-223	ENST00000511498	KDM5C	P41229	1560 aa		13.23	□□□□□ -0.29
IFT122-223	ENST00000511498	ATP7A	Q04656	1500 aa		13.23	□□□□□ -0.29
IFT122-223	ENST00000511498	MYO3A	Q8NEV4	1616 aa		13.21	□□□□□ -0.29
IFT122-223	ENST00000511498	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.21	□□□□□ -0.29	2e-6	■■■■■ 26.9
IFT122-223	ENST00000511498	RALGAPB	Q86X10	1494 aa		13.21	□□□□□ -0.3
IFT122-223	ENST00000511498	MROH2A	A6NES4	1674 aa		13.21	□□□□□ -0.3
IFT122-223	ENST00000511498	CNTLN	Q9NXG0	1405 aa		13.21	□□□□□ -0.3
IFT122-223	ENST00000511498	TET3	O43151	1660 aa		13.19	□□□□□ -0.3
IFT122-223	ENST00000511498	POTEA	Q6S8J7	498 aa		13.19	□□□□□ -0.3
IFT122-223	ENST00000511498	PPP6R1	Q9UPN7	881 aa		13.19	□□□□□ -0.3
IFT122-223	ENST00000511498	LAMC1	P11047	1609 aa		13.19	□□□□□ -0.3
IFT122-223	ENST00000511498	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.19	□□□□□ -0.3
IFT122-223	ENST00000511498	ZNF518A	Q6AHZ1	1483 aa		13.18	□□□□□ -0.3
IFT122-223	ENST00000511498	ABCA6	Q8N139	1617 aa		13.18	□□□□□ -0.3
IFT122-223	ENST00000511498	SPHKAP	Q2M3C7	1700 aa		13.17	□□□□□ -0.3
IFT122-223	ENST00000511498	CCDC144A	A2RUR9	1427 aa		13.17	□□□□□ -0.3
IFT122-223	ENST00000511498	ADRA2B	P18089	450 aa		13.17	□□□□□ -0.3
IFT122-223	ENST00000511498	DDX10	Q13206	875 aa	Known RBP	13.17	□□□□□ -0.3
IFT122-223	ENST00000511498	CEP152	O94986	1710 aa		13.16	□□□□□ -0.3
IFT122-223	ENST00000511498	HSPA5	P11021	654 aa	Known RBP	13.16	□□□□□ -0.3
IFT122-223	ENST00000511498	PRDM15	P57071	1507 aa	Predicted RBP	13.16	□□□□□ -0.3
IFT122-223	ENST00000511498	TRPM1	Q7Z4N2	1603 aa		13.16	□□□□□ -0.3
IFT122-223	ENST00000511498	VWDE	Q8N2E2	1590 aa		13.15	□□□□□ -0.3
IFT122-223	ENST00000511498	SPAG9	O60271	1321 aa	Known RBP	13.15	□□□□□ -0.3
IFT122-223	ENST00000511498		E9PCH4	1651 aa		13.15	□□□□□ -0.3
IFT122-223	ENST00000511498	SPATA31E1	Q6ZUB1	1445 aa		13.15	□□□□□ -0.3
IFT122-223	ENST00000511498	CCER2	I3L3R5	266 aa		13.15	□□□□□ -0.3
IFT122-223	ENST00000511498	NEURL4	Q96JN8	1562 aa		13.15	□□□□□ -0.3
IFT122-223	ENST00000511498	ANP32C	O43423	234 aa		13.14	□□□□□ -0.31
IFT122-223	ENST00000511498	YTHDC1	Q96MU7	727 aa	Known RBP	13.14	□□□□□ -0.31
IFT122-223	ENST00000511498	KIDINS220	Q9ULH0	1771 aa		13.14	□□□□□ -0.31
IFT122-223	ENST00000511498	TRPM2	O94759	1503 aa		13.13	□□□□□ -0.31
IFT122-223	ENST00000511498	RNF17	Q9BXT8	1623 aa	Known RBP	13.13	□□□□□ -0.31
IFT122-223	ENST00000511498	NBPF8	Q3BBV2	869 aa		13.12	□□□□□ -0.31
IFT122-223	ENST00000511498	MLH3	Q9UHC1	1453 aa		13.11	□□□□□ -0.31
IFT122-223	ENST00000511498	CCDC7	Q96M83	1385 aa		13.11	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms