RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 A2MP01023 1474 aa21.98■■□□□ 1.11
SCLT1-209ENST00000511426 BCORL1Q5H9F3 1711 aa21.97■■□□□ 1.11
SCLT1-209ENST00000511426 NEUROD1Q13562 356 aa21.97■■□□□ 1.11
SCLT1-209ENST00000511426 PKD2Q13563 968 aa21.96■■□□□ 1.11
SCLT1-209ENST00000511426 PRDM15P57071 1507 aaPredicted RBP21.96■■□□□ 1.11
SCLT1-209ENST00000511426 MYT1LQ9UL68 1186 aa21.95■■□□□ 1.1
SCLT1-209ENST00000511426 KANK1Q14678 1352 aa21.94■■□□□ 1.1
SCLT1-209ENST00000511426 FRMPD1Q5SYB0 1578 aa21.94■■□□□ 1.1
SCLT1-209ENST00000511426 VWDEQ8N2E2 1590 aa21.94■■□□□ 1.1
SCLT1-209ENST00000511426 ABCA6Q8N139 1617 aa21.92■■□□□ 1.1
SCLT1-209ENST00000511426 RNF17Q9BXT8 1623 aaKnown RBP21.92■■□□□ 1.1
SCLT1-209ENST00000511426 ATP10AO60312 1499 aa21.92■■□□□ 1.1
SCLT1-209ENST00000511426 DIP2CQ9Y2E4 1556 aa21.9■■□□□ 1.1
SCLT1-209ENST00000511426 PPP1R15AO75807 674 aaPredicted RBP21.9■■□□□ 1.1
SCLT1-209ENST00000511426 RAPGEF3O95398 923 aa21.88■■□□□ 1.09
SCLT1-209ENST00000511426 REREQ9P2R6 1566 aa21.88■■□□□ 1.09
SCLT1-209ENST00000511426 LMTK2Q8IWU2 1503 aa21.87■■□□□ 1.09
SCLT1-209ENST00000511426 TSPOAP1O95153 1857 aa21.87■■□□□ 1.09
SCLT1-209ENST00000511426 FOXD1Q16676 465 aa21.87■■□□□ 1.09
SCLT1-209ENST00000511426 TET3O43151 1660 aa21.87■■□□□ 1.09
SCLT1-209ENST00000511426 MROH1Q8NDA8 1641 aa21.87■■□□□ 1.09
SCLT1-209ENST00000511426 KIF3BO15066 747 aa21.86■■□□□ 1.09
SCLT1-209ENST00000511426 DNAJC5Q9H3Z4 198 aa21.86■■□□□ 1.09
SCLT1-209ENST00000511426 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.85■■□□□ 1.09
SCLT1-209ENST00000511426 ZNF316A6NFI3 1004 aaPredicted RBP21.83■■□□□ 1.09
SCLT1-209ENST00000511426 CCDC144AA2RUR9 1427 aa21.81■■□□□ 1.08
SCLT1-209ENST00000511426 YEATS2Q9ULM3 1422 aa21.79■■□□□ 1.08
SCLT1-209ENST00000511426 AGLP35573 1532 aa21.78■■□□□ 1.08
SCLT1-209ENST00000511426 EFCAB6Q5THR3 1501 aa21.78■■□□□ 1.08
SCLT1-209ENST00000511426 PTPRTO14522 1441 aa21.77■■□□□ 1.08
SCLT1-209ENST00000511426 TRPM2O94759 1503 aa21.77■■□□□ 1.08
SCLT1-209ENST00000511426 E9PCH4 1651 aa21.77■■□□□ 1.08
SCLT1-209ENST00000511426 PLA2R1Q13018 1463 aa21.77■■□□□ 1.07
SCLT1-209ENST00000511426 ZC3H13Q5T200 1668 aaKnown RBP21.76■■□□□ 1.07
SCLT1-209ENST00000511426 L3MBTL2Q969R5 705 aa21.75■■□□□ 1.07
SCLT1-209ENST00000511426 ARHGEF40Q8TER5 1519 aa21.75■■□□□ 1.07
SCLT1-209ENST00000511426 NEURL4Q96JN8 1562 aa21.73■■□□□ 1.07
SCLT1-209ENST00000511426 PPP6R1Q9UPN7 881 aa21.72■■□□□ 1.07
SCLT1-209ENST00000511426 SPHKAPQ2M3C7 1700 aa21.72■■□□□ 1.07
SCLT1-209ENST00000511426 COL17A1Q9UMD9 1497 aaPredicted RBP21.71■■□□□ 1.07
SCLT1-209ENST00000511426 ABCC3O15438 1527 aa21.71■■□□□ 1.07
SCLT1-209ENST00000511426 UHRF1BP1Q6BDS2 1440 aa21.69■■□□□ 1.06
SCLT1-209ENST00000511426 ARHGAP31Q2M1Z3 1444 aa21.69■■□□□ 1.06
SCLT1-209ENST00000511426 CEP152O94986 1710 aa21.67■■□□□ 1.06
SCLT1-209ENST00000511426 STAC3Q96MF2 364 aa21.66■■□□□ 1.06
SCLT1-209ENST00000511426 GGT6Q6P531 493 aa21.66■■□□□ 1.06
SCLT1-209ENST00000511426 WASHC2CQ9Y4E1 1318 aa21.65■■□□□ 1.06
SCLT1-209ENST00000511426 CNTLNQ9NXG0 1405 aa21.64■■□□□ 1.06
SCLT1-209ENST00000511426 CAMSAP1Q5T5Y3 1602 aa21.64■■□□□ 1.06
SCLT1-209ENST00000511426 NPATQ14207 1427 aa21.63■■□□□ 1.05
SCLT1-209ENST00000511426 SPATA31E1Q6ZUB1 1445 aa21.62■■□□□ 1.05
SCLT1-209ENST00000511426 CLTCL1P53675 1640 aa21.59■■□□□ 1.05
SCLT1-209ENST00000511426 TRHP20396 242 aaPredicted RBP21.59■■□□□ 1.05
SCLT1-209ENST00000511426 NOS1P29475 1434 aa21.58■■□□□ 1.04
SCLT1-209ENST00000511426 RALGAPBQ86X10 1494 aa21.58■■□□□ 1.04
SCLT1-209ENST00000511426 DIEXFQ68CQ4 756 aaKnown RBP21.55■■□□□ 1.04
SCLT1-209ENST00000511426 NBPF8Q3BBV2 869 aa21.54■■□□□ 1.04
SCLT1-209ENST00000511426 PRAG1Q86YV5 1406 aa21.53■■□□□ 1.04
SCLT1-209ENST00000511426 EIF4G2P78344 907 aaKnown RBP eCLIP21.53■■□□□ 1.04
SCLT1-209ENST00000511426 DCAF11Q8TEB1 546 aa21.53■■□□□ 1.04
SCLT1-209ENST00000511426 KIF1BO60333 1816 aa21.51■■□□□ 1.03
SCLT1-209ENST00000511426 PIK3C2BO00750 1634 aa21.5■■□□□ 1.03
SCLT1-209ENST00000511426 ADGRB3O60242 1522 aa21.5■■□□□ 1.03
SCLT1-209ENST00000511426 SIGLEC1Q9BZZ2 1709 aa21.48■■□□□ 1.03
SCLT1-209ENST00000511426 SLC52A1Q9NWF4 448 aa21.48■■□□□ 1.03
SCLT1-209ENST00000511426 MYOM2P54296 1465 aa21.48■■□□□ 1.03
SCLT1-209ENST00000511426 LAMC1P11047 1609 aa21.47■■□□□ 1.03
SCLT1-209ENST00000511426 TRPM1Q7Z4N2 1603 aa21.46■■□□□ 1.03
SCLT1-209ENST00000511426 RGL3Q3MIN7 710 aa21.46■■□□□ 1.03
SCLT1-209ENST00000511426 GPRASP1Q5JY77 1395 aa21.46■■□□□ 1.03
SCLT1-209ENST00000511426 PREX1Q8TCU6 1659 aa21.46■■□□□ 1.03
SCLT1-209ENST00000511426 SYNMO15061 1565 aa21.45■■□□□ 1.02
SCLT1-209ENST00000511426 RPGRIP1LQ68CZ1 1315 aa21.44■■□□□ 1.02
SCLT1-209ENST00000511426 UGGT1Q9NYU2 1555 aa21.44■■□□□ 1.02
SCLT1-209ENST00000511426 ERVK-7P63135 1459 aa21.43■■□□□ 1.02
SCLT1-209ENST00000511426 KDM2AQ9Y2K7 1162 aa21.43■■□□□ 1.02
SCLT1-209ENST00000511426 CLTCQ00610 1675 aaKnown RBP21.42■■□□□ 1.02
SCLT1-209ENST00000511426 SPATA31D1Q6ZQQ2 1576 aa21.42■■□□□ 1.02
SCLT1-209ENST00000511426 MADDQ8WXG6 1647 aa21.42■■□□□ 1.02
SCLT1-209ENST00000511426 HSPA5P11021 654 aaKnown RBP21.41■■□□□ 1.02
SCLT1-209ENST00000511426 IFT172Q9UG01 1749 aa21.41■■□□□ 1.02
SCLT1-209ENST00000511426 ZNF326Q5BKZ1 582 aaKnown RBP21.4■■□□□ 1.02
SCLT1-209ENST00000511426 ESF1Q9H501 851 aaKnown RBP21.4■■□□□ 1.02
SCLT1-209ENST00000511426 MROH2AA6NES4 1674 aa21.4■■□□□ 1.02
SCLT1-209ENST00000511426 ROCK2O75116 1388 aaKnown RBP21.4■■□□□ 1.02
SCLT1-209ENST00000511426 KIAA1210Q9ULL0 1709 aa21.4■■□□□ 1.02
SCLT1-209ENST00000511426 USP47Q96K76 1375 aa21.39■■□□□ 1.02
SCLT1-209ENST00000511426 NRXN1Q9ULB1 1477 aa21.38■■□□□ 1.01
SCLT1-209ENST00000511426 CARD11Q9BXL7 1154 aa21.38■■□□□ 1.01
SCLT1-209ENST00000511426 ARID4BQ4LE39 1312 aaPredicted RBP21.36■■□□□ 1.01
SCLT1-209ENST00000511426 ZMYM3Q14202 1370 aa21.34■■□□□ 1.01
SCLT1-209ENST00000511426 ZFYVE9O95405 1425 aa21.33■■□□□ 1.01
SCLT1-209ENST00000511426 PPLO60437 1756 aa21.32■■□□□ 1
SCLT1-209ENST00000511426 POLR1AO95602 1720 aaPredicted RBP21.32■■□□□ 1
SCLT1-209ENST00000511426 IDI1Q13907 227 aa21.31■■□□□ 1
SCLT1-209ENST00000511426 MLECQ14165 292 aa21.31■■□□□ 1
SCLT1-209ENST00000511426 TMEM131LA2VDJ0 1609 aa21.31■■□□□ 1
SCLT1-209ENST00000511426 NEXMIFQ5QGS0 1516 aa21.29■■□□□ 1
SCLT1-209ENST00000511426 CFAP65Q6ZU64 1925 aaKnown RBP21.29■■□□□ 1
SCLT1-209ENST00000511426 KDM5AP29375 1690 aaKnown RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms