RNA–Protein interactions for RNA: ENST00000511092.5

CLCN3-207, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-207ENST00000511092 FHOD3Q2V2M9 1422 aa11.62□□□□□ -0.55
CLCN3-207ENST00000511092 VWDEQ8N2E2 1590 aa11.62□□□□□ -0.55
CLCN3-207ENST00000511092 TRAPPC8Q9Y2L5 1435 aa11.61□□□□□ -0.55
CLCN3-207ENST00000511092 MYO3AQ8NEV4 1616 aa11.61□□□□□ -0.55
CLCN3-207ENST00000511092 BIVM-ERCC5R4GMW8 1640 aa11.61□□□□□ -0.55
CLCN3-207ENST00000511092 MIER1Q8N108 512 aa11.61□□□□□ -0.55
CLCN3-207ENST00000511092 FBXO3Q9UK99 471 aa11.61□□□□□ -0.55
CLCN3-207ENST00000511092 PLA2R1Q13018 1463 aa11.6□□□□□ -0.55
CLCN3-207ENST00000511092 NEURL4Q96JN8 1562 aa11.59□□□□□ -0.55
CLCN3-207ENST00000511092 PAK3O75914 559 aaPredicted RBP11.59□□□□□ -0.55
CLCN3-207ENST00000511092 PLEKHG5O94827 1062 aa11.59□□□□□ -0.55
CLCN3-207ENST00000511092 CEP350Q5VT06 3117 aa11.58□□□□□ -0.56
CLCN3-207ENST00000511092 RAPGEF2Q9Y4G8 1499 aa11.58□□□□□ -0.56
CLCN3-207ENST00000511092 PLCD3Q8N3E9 789 aa11.57□□□□□ -0.56
CLCN3-207ENST00000511092 ABCA8O94911 1581 aa11.56□□□□□ -0.56
CLCN3-207ENST00000511092 XIRP1Q702N8 1843 aaKnown RBP11.56□□□□□ -0.56
CLCN3-207ENST00000511092 LRP6O75581 1613 aa11.55□□□□□ -0.56
CLCN3-207ENST00000511092 CEP170BQ9Y4F5 1589 aaPredicted RBP11.54□□□□□ -0.56
CLCN3-207ENST00000511092 C9orf84Q5VXU9 1444 aa11.54□□□□□ -0.56
CLCN3-207ENST00000511092 RGS12O14924 1447 aa11.53□□□□□ -0.56
CLCN3-207ENST00000511092 CDK12Q9NYV4 1490 aaPredicted RBP11.53□□□□□ -0.56
CLCN3-207ENST00000511092 PKD2Q13563 968 aa11.53□□□□□ -0.56
CLCN3-207ENST00000511092 EP400Q96L91 3159 aa11.51□□□□□ -0.57
CLCN3-207ENST00000511092 ATP10AO60312 1499 aa11.51□□□□□ -0.57
CLCN3-207ENST00000511092 MAGI2Q86UL8 1455 aa11.51□□□□□ -0.57
CLCN3-207ENST00000511092 ROBO1Q9Y6N7 1651 aa11.5□□□□□ -0.57
CLCN3-207ENST00000511092 SYNMO15061 1565 aa11.5□□□□□ -0.57
CLCN3-207ENST00000511092 ARID3CA6NKF2 412 aa11.49□□□□□ -0.57
CLCN3-207ENST00000511092 CFAP74Q9C0B2 1584 aa11.49□□□□□ -0.57
CLCN3-207ENST00000511092 NHSL1Q5SYE7 1610 aa11.48□□□□□ -0.57
CLCN3-207ENST00000511092 RXRBP28702 533 aa11.47□□□□□ -0.57
CLCN3-207ENST00000511092 PHLPP1O60346 1717 aa11.46□□□□□ -0.57
CLCN3-207ENST00000511092 POTEIP0CG38 1075 aa11.46□□□□□ -0.57
CLCN3-207ENST00000511092 PHF12Q96QT6 1004 aa11.46□□□□□ -0.57
CLCN3-207ENST00000511092 UGGT2Q9NYU1 1516 aa11.45□□□□□ -0.58
CLCN3-207ENST00000511092 ZBTB47Q9UFB7 747 aaPredicted RBP11.45□□□□□ -0.58
CLCN3-207ENST00000511092 MROH2AA6NES4 1674 aa11.44□□□□□ -0.58
CLCN3-207ENST00000511092 GALR2O43603 387 aaPredicted RBP11.44□□□□□ -0.58
CLCN3-207ENST00000511092 VASPP50552 380 aaPredicted RBP11.43□□□□□ -0.58
CLCN3-207ENST00000511092 DNMT1P26358 1616 aaKnown RBP11.42□□□□□ -0.58
CLCN3-207ENST00000511092 CDK13Q14004 1512 aaKnown RBP11.42□□□□□ -0.58
CLCN3-207ENST00000511092 NUTM2BA6NNL0 878 aaPredicted RBP11.42□□□□□ -0.58
CLCN3-207ENST00000511092 NUTM2EB1AL46 878 aaPredicted RBP11.42□□□□□ -0.58
CLCN3-207ENST00000511092 NUTM2DQ5VT03 806 aaPredicted RBP11.42□□□□□ -0.58
CLCN3-207ENST00000511092 ZNF772Q68DY9 489 aaPredicted RBP11.42□□□□□ -0.58
CLCN3-207ENST00000511092 NUTM2AQ8IVF1 878 aaPredicted RBP11.42□□□□□ -0.58
CLCN3-207ENST00000511092 NPATQ14207 1427 aa11.42□□□□□ -0.58
CLCN3-207ENST00000511092 DCBLD2Q96PD2 775 aa11.41□□□□□ -0.58
CLCN3-207ENST00000511092 CCDC61Q9Y6R9 512 aa11.41□□□□□ -0.58
CLCN3-207ENST00000511092 DIP2CQ9Y2E4 1556 aa11.41□□□□□ -0.58
CLCN3-207ENST00000511092 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.4□□□□□ -0.58
CLCN3-207ENST00000511092 KDM5CP41229 1560 aa11.39□□□□□ -0.59
CLCN3-207ENST00000511092 ABCA6Q8N139 1617 aa11.38□□□□□ -0.59
CLCN3-207ENST00000511092 ATP10BO94823 1461 aa11.38□□□□□ -0.59
CLCN3-207ENST00000511092 FAM135BQ49AJ0 1406 aa11.38□□□□□ -0.59
CLCN3-207ENST00000511092 C1QTNF8P60827 252 aa11.38□□□□□ -0.59
CLCN3-207ENST00000511092 RASEFQ8IZ41 740 aa11.38□□□□□ -0.59
CLCN3-207ENST00000511092 TSPYL2Q9H2G4 693 aaPredicted RBP11.38□□□□□ -0.59
CLCN3-207ENST00000511092 COL16A1Q07092 1604 aaPredicted RBP11.36□□□□□ -0.59
CLCN3-207ENST00000511092 KLHL34Q8N239 644 aa11.36□□□□□ -0.59
CLCN3-207ENST00000511092 PCDH10Q9P2E7 1040 aa11.36□□□□□ -0.59
CLCN3-207ENST00000511092 ATAD2Q6PL18 1390 aa11.36□□□□□ -0.59
CLCN3-207ENST00000511092 IQGAP1P46940 1657 aa11.36□□□□□ -0.59
CLCN3-207ENST00000511092 CLTCQ00610 1675 aaKnown RBP11.36□□□□□ -0.59
CLCN3-207ENST00000511092 AGLP35573 1532 aa11.35□□□□□ -0.59
CLCN3-207ENST00000511092 MEX3CQ5U5Q3 659 aaKnown RBP11.35□□□□□ -0.59
CLCN3-207ENST00000511092 IGF1RP08069 1367 aa11.35□□□□□ -0.59
CLCN3-207ENST00000511092 ADGBQ8N7X0 1667 aa11.34□□□□□ -0.59
CLCN3-207ENST00000511092 JCADQ9P266 1359 aa11.34□□□□□ -0.59
CLCN3-207ENST00000511092 NUBP1P53384 320 aa11.34□□□□□ -0.59
CLCN3-207ENST00000511092 CAMTA1Q9Y6Y1 1673 aa11.33□□□□□ -0.6
CLCN3-207ENST00000511092 REREQ9P2R6 1566 aa11.33□□□□□ -0.6
CLCN3-207ENST00000511092 ZNF784Q8NCA9 323 aaPredicted RBP11.33□□□□□ -0.6
CLCN3-207ENST00000511092 MS4A3Q96HJ5 214 aa11.33□□□□□ -0.6
CLCN3-207ENST00000511092 BCL9LQ86UU0 1499 aa11.32□□□□□ -0.6
CLCN3-207ENST00000511092 PSDA5PKW4 1024 aaPredicted RBP11.32□□□□□ -0.6
CLCN3-207ENST00000511092 ITSN2Q9NZM3 1697 aa11.32□□□□□ -0.6
CLCN3-207ENST00000511092 SHPRHQ149N8 1683 aa11.31□□□□□ -0.6
CLCN3-207ENST00000511092 LHX8Q68G74 356 aa11.31□□□□□ -0.6
CLCN3-207ENST00000511092 KIF12Q96FN5 646 aa11.31□□□□□ -0.6
CLCN3-207ENST00000511092 SCAPERQ9BY12 1400 aa11.3□□□□□ -0.6
CLCN3-207ENST00000511092 CNTLNQ9NXG0 1405 aa11.3□□□□□ -0.6
CLCN3-207ENST00000511092 ESF1Q9H501 851 aaKnown RBP11.3□□□□□ -0.6
CLCN3-207ENST00000511092 A2ML1A8K2U0 1454 aa11.29□□□□□ -0.6
CLCN3-207ENST00000511092 HRCP23327 699 aa11.28□□□□□ -0.6
CLCN3-207ENST00000511092 NPHP4O75161 1426 aaPredicted RBP11.27□□□□□ -0.6
CLCN3-207ENST00000511092 ZC3H13Q5T200 1668 aaKnown RBP11.27□□□□□ -0.6
CLCN3-207ENST00000511092 ASTLQ6HA08 431 aaPredicted RBP11.27□□□□□ -0.61
CLCN3-207ENST00000511092 AFF2P51816 1311 aa11.27□□□□□ -0.61
CLCN3-207ENST00000511092 ZMYM3Q14202 1370 aa11.27□□□□□ -0.61
CLCN3-207ENST00000511092 DEPDC5O75140 1603 aa11.26□□□□□ -0.61
CLCN3-207ENST00000511092 NWD1Q149M9 1564 aa11.25□□□□□ -0.61
CLCN3-207ENST00000511092 IFNLR1Q8IU57 520 aaPredicted RBP11.25□□□□□ -0.61
CLCN3-207ENST00000511092 FAM212AQ96EL1 285 aa11.25□□□□□ -0.61
CLCN3-207ENST00000511092 SGIP1Q9BQI5 828 aa11.24□□□□□ -0.61
CLCN3-207ENST00000511092 DEFB132Q7Z7B7 95 aa11.23□□□□□ -0.61
CLCN3-207ENST00000511092 CARMIL1Q5VZK9 1371 aa11.23□□□□□ -0.61
CLCN3-207ENST00000511092 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.23□□□□□ -0.61
CLCN3-207ENST00000511092 MED14O60244 1454 aa11.23□□□□□ -0.61
CLCN3-207ENST00000511092 ABCC1P33527 1531 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms