RNA–Protein interactions for RNA: ENST00000510871.5

RBM47-207, Transcript of RNA binding motif protein 47, humanhuman

TSL 1 (best)

Gene RBM47, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-207ENST00000510871 SYNJ2O15056 1496 aa17.41■□□□□ 0.38
RBM47-207ENST00000510871 TROQ12816 1431 aaPredicted RBP17.41■□□□□ 0.38
RBM47-207ENST00000510871 GOLGA2Q08379 1002 aa17.4■□□□□ 0.38
RBM47-207ENST00000510871 CCDC146Q8IYE0 955 aa17.4■□□□□ 0.38
RBM47-207ENST00000510871 EPRSP07814 1512 aaKnown RBP17.4■□□□□ 0.38
RBM47-207ENST00000510871 FANCIQ9NVI1 1328 aa17.39■□□□□ 0.37
RBM47-207ENST00000510871 CDK13Q14004 1512 aaKnown RBP17.39■□□□□ 0.37
RBM47-207ENST00000510871 CHMP4BQ9H444 224 aaKnown RBP17.38■□□□□ 0.37
RBM47-207ENST00000510871 KIAA0586Q9BVV6 1533 aa17.38■□□□□ 0.37
RBM47-207ENST00000510871 NAIPQ13075 1403 aa17.37■□□□□ 0.37
RBM47-207ENST00000510871 IQGAP2Q13576 1575 aa17.37■□□□□ 0.37
RBM47-207ENST00000510871 SOX12O15370 315 aa17.37■□□□□ 0.37
RBM47-207ENST00000510871 DAPK1P53355 1430 aa17.37■□□□□ 0.37
RBM47-207ENST00000510871 WDR97A6NE52 1622 aa17.36■□□□□ 0.37
RBM47-207ENST00000510871 URB2Q14146 1524 aaKnown RBP17.36■□□□□ 0.37
RBM47-207ENST00000510871 ARHGAP5Q13017 1502 aa17.36■□□□□ 0.37
RBM47-207ENST00000510871 OSCARQ8IYS5 282 aa17.35■□□□□ 0.37
RBM47-207ENST00000510871 TERF2IPQ9NYB0 399 aa17.35■□□□□ 0.37
RBM47-207ENST00000510871 TCERG1O14776 1098 aaKnown RBP17.34■□□□□ 0.37
RBM47-207ENST00000510871 NBPF8Q3BBV2 869 aa17.34■□□□□ 0.37
RBM47-207ENST00000510871 C9orf84Q5VXU9 1444 aa17.34■□□□□ 0.37
RBM47-207ENST00000510871 LMOD2Q6P5Q4 547 aa17.33■□□□□ 0.36
RBM47-207ENST00000510871 KIAA1107Q9UPP5 1409 aa17.33■□□□□ 0.36
RBM47-207ENST00000510871 NAP1L5Q96NT1 182 aaPredicted RBP17.32■□□□□ 0.36
RBM47-207ENST00000510871 IPO9Q96P70 1041 aaKnown RBP17.3■□□□□ 0.36
RBM47-207ENST00000510871 VGFO15240 615 aaPredicted RBP17.3■□□□□ 0.36
RBM47-207ENST00000510871 CASC1Q6TDU7 716 aa17.3■□□□□ 0.36
RBM47-207ENST00000510871 AFAP1Q8N556 730 aa17.3■□□□□ 0.36
RBM47-207ENST00000510871 TRHP20396 242 aaPredicted RBP17.3■□□□□ 0.36
RBM47-207ENST00000510871 ANO8Q9HCE9 1232 aaPredicted RBP17.29■□□□□ 0.36
RBM47-207ENST00000510871 IPO8O15397 1037 aaKnown RBP17.28■□□□□ 0.36
RBM47-207ENST00000510871 CDK11BP21127 795 aaKnown RBP17.28■□□□□ 0.36
RBM47-207ENST00000510871 TRIM44Q96DX7 344 aaPredicted RBP17.28■□□□□ 0.36
RBM47-207ENST00000510871 ROCK1Q13464 1354 aa17.27■□□□□ 0.36
RBM47-207ENST00000510871 PTPN23Q9H3S7 1636 aa17.27■□□□□ 0.36
RBM47-207ENST00000510871 VSIG10Q8N0Z9 540 aa17.27■□□□□ 0.36
RBM47-207ENST00000510871 STAC3Q96MF2 364 aa17.27■□□□□ 0.36
RBM47-207ENST00000510871 RRP1P56182 461 aaKnown RBP17.27■□□□□ 0.35
RBM47-207ENST00000510871 CENPJQ9HC77 1338 aaPredicted RBP17.26■□□□□ 0.35
RBM47-207ENST00000510871 CYB5RLQ6IPT4 315 aa17.26■□□□□ 0.35
RBM47-207ENST00000510871 EVC2Q86UK5 1308 aa17.25■□□□□ 0.35
RBM47-207ENST00000510871 CALD1Q05682 793 aaKnown RBP17.25■□□□□ 0.35
RBM47-207ENST00000510871 PLIN1O60240 522 aa17.25■□□□□ 0.35
RBM47-207ENST00000510871 RRP7AQ9Y3A4 280 aaKnown RBP17.25■□□□□ 0.35
RBM47-207ENST00000510871 NCLP19338 710 aaKnown RBP17.24■□□□□ 0.35
RBM47-207ENST00000510871 RWDD1Q9H446 243 aaPredicted RBP17.24■□□□□ 0.35
RBM47-207ENST00000510871 EXOC6Q8TAG9 804 aa17.24■□□□□ 0.35
RBM47-207ENST00000510871 ITPRIPQ8IWB1 547 aa17.24■□□□□ 0.35
RBM47-207ENST00000510871 GOLGA6L22H0YM25 854 aa17.23■□□□□ 0.35
RBM47-207ENST00000510871 CGNL1Q0VF96 1302 aa17.23■□□□□ 0.35
RBM47-207ENST00000510871 HAP1P54257 671 aaPredicted RBP17.23■□□□□ 0.35
RBM47-207ENST00000510871 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.22■□□□□ 0.35
RBM47-207ENST00000510871 RTF1Q92541 710 aaKnown RBP17.22■□□□□ 0.35
RBM47-207ENST00000510871 NBPF1Q3BBV0 1214 aa17.22■□□□□ 0.35
RBM47-207ENST00000510871 SMC4Q9NTJ3 1288 aa17.22■□□□□ 0.35
RBM47-207ENST00000510871 GRIN2AQ12879 1464 aa17.22■□□□□ 0.35
RBM47-207ENST00000510871 A0A0G2JS52 829 aa17.22■□□□□ 0.35
RBM47-207ENST00000510871 CLUAP1Q96AJ1 413 aa17.21■□□□□ 0.35
RBM47-207ENST00000510871 PLB1Q6P1J6 1458 aa17.21■□□□□ 0.35
RBM47-207ENST00000510871 PLEKHH2Q8IVE3 1493 aa17.21■□□□□ 0.35
RBM47-207ENST00000510871 APAF1O14727 1248 aa17.21■□□□□ 0.35
RBM47-207ENST00000510871 ABCC5O15440 1437 aa17.2■□□□□ 0.34
RBM47-207ENST00000510871 PMFBP1Q8TBY8 1022 aa17.2■□□□□ 0.34
RBM47-207ENST00000510871 A0A0U1RQG5 324 aaPredicted RBP17.2■□□□□ 0.34
RBM47-207ENST00000510871 BRD4O60885 1362 aaPredicted RBP17.2■□□□□ 0.34
RBM47-207ENST00000510871 E9PSI1 815 aa17.19■□□□□ 0.34
RBM47-207ENST00000510871 MINK1Q8N4C8 1332 aaPredicted RBP17.18■□□□□ 0.34
RBM47-207ENST00000510871 CAMSAP2Q08AD1 1489 aa17.18■□□□□ 0.34
RBM47-207ENST00000510871 ZNF608Q9ULD9 1512 aaPredicted RBP17.18■□□□□ 0.34
RBM47-207ENST00000510871 CRBNQ96SW2 442 aa17.18■□□□□ 0.34
RBM47-207ENST00000510871 HSP90AB1P08238 724 aaKnown RBP17.17■□□□□ 0.34
RBM47-207ENST00000510871 ARHGEF11O15085 1522 aa17.17■□□□□ 0.34
RBM47-207ENST00000510871 MAGI1Q96QZ7 1491 aaPredicted RBP17.17■□□□□ 0.34
RBM47-207ENST00000510871 PAK3O75914 559 aaPredicted RBP17.17■□□□□ 0.34
RBM47-207ENST00000510871 USP35Q9P2H5 1018 aa17.17■□□□□ 0.34
RBM47-207ENST00000510871 ANKRD30BQ9BXX2 1392 aa17.16■□□□□ 0.34
RBM47-207ENST00000510871 EID1Q9Y6B2 187 aa17.16■□□□□ 0.34
RBM47-207ENST00000510871 CFAP70Q5T0N1 1121 aa17.15■□□□□ 0.34
RBM47-207ENST00000510871 L1TD1Q5T7N2 865 aaKnown RBP17.15■□□□□ 0.34
RBM47-207ENST00000510871 HSCBQ8IWL3 235 aa17.15■□□□□ 0.34
RBM47-207ENST00000510871 OS9Q13438 667 aaPredicted RBP17.14■□□□□ 0.33
RBM47-207ENST00000510871 NUTM2FA1L443 756 aa17.14■□□□□ 0.33
RBM47-207ENST00000510871 AKNAQ7Z591 1439 aa17.13■□□□□ 0.33
RBM47-207ENST00000510871 CCDC184Q52MB2 194 aa17.13■□□□□ 0.33
RBM47-207ENST00000510871 CENPQQ7L2Z9 268 aaPredicted RBP17.13■□□□□ 0.33
RBM47-207ENST00000510871 BCL2L13Q9BXK5 485 aa17.12■□□□□ 0.33
RBM47-207ENST00000510871 TMEM132EQ6IEE7 984 aa17.12■□□□□ 0.33
RBM47-207ENST00000510871 SPRYD3Q8NCJ5 442 aa17.12■□□□□ 0.33
RBM47-207ENST00000510871 APBB1O00213 710 aa17.11■□□□□ 0.33
RBM47-207ENST00000510871 FAM69CQ0P6D2 419 aa17.11■□□□□ 0.33
RBM47-207ENST00000510871 NGDNQ8NEJ9 315 aaKnown RBP17.11■□□□□ 0.33
RBM47-207ENST00000510871 SCAPERQ9BY12 1400 aa17.11■□□□□ 0.33
RBM47-207ENST00000510871 ADAMTS8Q9UP79 889 aa17.1■□□□□ 0.33
RBM47-207ENST00000510871 CCDC141Q6ZP82 1450 aa17.1■□□□□ 0.33
RBM47-207ENST00000510871 PDE4AP27815 886 aa17.1■□□□□ 0.33
RBM47-207ENST00000510871 NGEFQ8N5V2 710 aa17.1■□□□□ 0.33
RBM47-207ENST00000510871 LMOD3Q0VAK6 560 aa17.1■□□□□ 0.33
RBM47-207ENST00000510871 RSPH6AQ9H0K4 717 aa17.09■□□□□ 0.33
RBM47-207ENST00000510871 NCOA1Q15788 1441 aa17.09■□□□□ 0.33
RBM47-207ENST00000510871 THOC2Q8NI27 1593 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms