RNA–Protein interactions for RNA: ENST00000510500.5

CAST-232, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-232ENST00000510500 IRF5Q13568 498 aa10.26□□□□□ -0.77
CAST-232ENST00000510500 TRAK2O60296 914 aa10.26□□□□□ -0.77
CAST-232ENST00000510500 RGS3P49796 1198 aa10.26□□□□□ -0.77
CAST-232ENST00000510500 NBPF11Q86T75 865 aa10.25□□□□□ -0.77
CAST-232ENST00000510500 TMTC2Q8N394 836 aa10.25□□□□□ -0.77
CAST-232ENST00000510500 LAS1LQ9Y4W2 734 aaKnown RBP10.25□□□□□ -0.77
CAST-232ENST00000510500 TTC36A6NLP5 189 aa10.24□□□□□ -0.77
CAST-232ENST00000510500 REM2Q8IYK8 340 aaPredicted RBP10.24□□□□□ -0.77
CAST-232ENST00000510500 BRD1O95696 1058 aa10.23□□□□□ -0.77
CAST-232ENST00000510500 HSP90AA1P07900 732 aaKnown RBP10.23□□□□□ -0.77
CAST-232ENST00000510500 NBPF1Q3BBV0 1214 aa10.23□□□□□ -0.77
CAST-232ENST00000510500 RETREG2Q8NC44 543 aa10.23□□□□□ -0.77
CAST-232ENST00000510500 MYH16Q9H6N6 1097 aa10.23□□□□□ -0.77
CAST-232ENST00000510500 IGSF5Q9NSI5 407 aa10.23□□□□□ -0.77
CAST-232ENST00000510500 SLC52A1Q9NWF4 448 aa10.23□□□□□ -0.77
CAST-232ENST00000510500 WASHC2AQ641Q2 1341 aa10.23□□□□□ -0.77
CAST-232ENST00000510500 MYCNP04198 464 aaPredicted RBP10.21□□□□□ -0.77
CAST-232ENST00000510500 FLIIQ13045 1269 aa10.21□□□□□ -0.77
CAST-232ENST00000510500 FAM50AQ14320 339 aaKnown RBP10.21□□□□□ -0.77
CAST-232ENST00000510500 PLCD3Q8N3E9 789 aa10.21□□□□□ -0.77
CAST-232ENST00000510500 A6NJR5 290 aa10.21□□□□□ -0.78
CAST-232ENST00000510500 SPTY2D1Q68D10 685 aaPredicted RBP10.21□□□□□ -0.78
CAST-232ENST00000510500 PROM2Q8N271 834 aa10.21□□□□□ -0.78
CAST-232ENST00000510500 SPOCK2Q92563 424 aa10.21□□□□□ -0.78
CAST-232ENST00000510500 APPP05067 770 aa10.2□□□□□ -0.78
CAST-232ENST00000510500 GPBP1L1Q9HC44 474 aaPredicted RBP10.2□□□□□ -0.78
CAST-232ENST00000510500 ZCCHC6Q5VYS8 1495 aaKnown RBP10.19□□□□□ -0.78
CAST-232ENST00000510500 ANP32AP39687 249 aaKnown RBP10.19□□□□□ -0.78
CAST-232ENST00000510500 CARD10Q9BWT7 1032 aa10.19□□□□□ -0.78
CAST-232ENST00000510500 PDCL3Q9H2J4 239 aa10.19□□□□□ -0.78
CAST-232ENST00000510500 THOC2Q8NI27 1593 aaKnown RBP10.19□□□□□ -0.78
CAST-232ENST00000510500 MARCH6O60337 910 aa10.19□□□□□ -0.78
CAST-232ENST00000510500 ZC3H4Q9UPT8 1303 aaKnown RBP10.18□□□□□ -0.78
CAST-232ENST00000510500 SLC4A2P04920 1241 aa10.18□□□□□ -0.78
CAST-232ENST00000510500 SH3BP1Q9Y3L3 701 aa10.18□□□□□ -0.78
CAST-232ENST00000510500 EGFL6Q8IUX8 553 aa10.17□□□□□ -0.78
CAST-232ENST00000510500 SGSM3Q96HU1 749 aa10.17□□□□□ -0.78
CAST-232ENST00000510500 TPD52L2O43399 206 aaKnown RBP10.16□□□□□ -0.78
CAST-232ENST00000510500 UTP14CQ5TAP6 766 aaKnown RBP10.16□□□□□ -0.78
CAST-232ENST00000510500 SMAP1Q8IYB5 467 aaPredicted RBP10.16□□□□□ -0.78
CAST-232ENST00000510500 HS6ST3Q8IZP7 471 aa10.16□□□□□ -0.78
CAST-232ENST00000510500 CASC1Q6TDU7 716 aa10.15□□□□□ -0.78
CAST-232ENST00000510500 SOX12O15370 315 aa10.14□□□□□ -0.79
CAST-232ENST00000510500 TSHZ1Q6ZSZ6 1077 aa10.14□□□□□ -0.79
CAST-232ENST00000510500 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.14□□□□□ -0.79
CAST-232ENST00000510500 PPME1Q9Y570 386 aa10.14□□□□□ -0.79
CAST-232ENST00000510500 UNCXA6NJT0 531 aa10.14□□□□□ -0.79
CAST-232ENST00000510500 PITPNM1O00562 1244 aa10.14□□□□□ -0.79
CAST-232ENST00000510500 CC2D1BQ5T0F9 858 aaKnown RBP10.14□□□□□ -0.79
CAST-232ENST00000510500 GORABQ5T7V8 394 aa10.14□□□□□ -0.79
CAST-232ENST00000510500 CLUAP1Q96AJ1 413 aa10.14□□□□□ -0.79
CAST-232ENST00000510500 ZMYND10O75800 440 aa10.13□□□□□ -0.79
CAST-232ENST00000510500 FAM9BQ8IZU0 186 aa10.12□□□□□ -0.79
CAST-232ENST00000510500 SERPINA10Q9UK55 444 aa10.12□□□□□ -0.79
CAST-232ENST00000510500 TCERG1O14776 1098 aaKnown RBP10.12□□□□□ -0.79
CAST-232ENST00000510500 POLA2Q14181 598 aa10.12□□□□□ -0.79
CAST-232ENST00000510500 KCNV2Q8TDN2 545 aa10.12□□□□□ -0.79
CAST-232ENST00000510500 NCAPD3P42695 1498 aa10.11□□□□□ -0.79
CAST-232ENST00000510500 ANKRD62A6NC57 917 aa10.11□□□□□ -0.79
CAST-232ENST00000510500 SPDYE4A6NLX3 237 aa10.11□□□□□ -0.79
CAST-232ENST00000510500 GTPBP6O43824 516 aaPredicted RBP10.11□□□□□ -0.79
CAST-232ENST00000510500 YY1AP1Q9H869 796 aa10.11□□□□□ -0.79
CAST-232ENST00000510500 SLC20A2Q08357 652 aa10.1□□□□□ -0.79
CAST-232ENST00000510500 NBPF9Q3BBW0 867 aa10.1□□□□□ -0.79
CAST-232ENST00000510500 TAF3Q5VWG9 929 aa10.1□□□□□ -0.79
CAST-232ENST00000510500 TERF2IPQ9NYB0 399 aa10.1□□□□□ -0.79
CAST-232ENST00000510500 NOP58Q9Y2X3 529 aaKnown RBP10.1□□□□□ -0.79
CAST-232ENST00000510500 SUGT1Q9Y2Z0 365 aa10.1□□□□□ -0.79
CAST-232ENST00000510500 GABBR2O75899 941 aa10.1□□□□□ -0.79
CAST-232ENST00000510500 RINLQ6ZS11 566 aa10.1□□□□□ -0.79
CAST-232ENST00000510500 HSP90AB3PQ58FF7 597 aa10.09□□□□□ -0.79
CAST-232ENST00000510500 CCDC97Q96F63 343 aaPredicted RBP10.09□□□□□ -0.79
CAST-232ENST00000510500 NESP48681 1621 aa10.09□□□□□ -0.79
CAST-232ENST00000510500 NKX1-1Q15270 411 aaPredicted RBP10.08□□□□□ -0.8
CAST-232ENST00000510500 RALBP1Q15311 655 aa10.08□□□□□ -0.8
CAST-232ENST00000510500 OTUD6BQ8N6M0 293 aa10.08□□□□□ -0.8
CAST-232ENST00000510500 KDM4CQ9H3R0 1056 aa10.08□□□□□ -0.8
CAST-232ENST00000510500 RBM27Q9P2N5 1060 aaKnown RBP10.08□□□□□ -0.8
CAST-232ENST00000510500 ARIH1Q9Y4X5 557 aaPredicted RBP10.08□□□□□ -0.8
CAST-232ENST00000510500 CCDC96Q2M329 555 aa10.07□□□□□ -0.8
CAST-232ENST00000510500 FOXD4L6Q3SYB3 417 aaPredicted RBP10.07□□□□□ -0.8
CAST-232ENST00000510500 FOXD4L3Q6VB84 417 aaPredicted RBP10.07□□□□□ -0.8
CAST-232ENST00000510500 ERCC3P19447 782 aa10.07□□□□□ -0.8
CAST-232ENST00000510500 NME8Q8N427 588 aa10.07□□□□□ -0.8
CAST-232ENST00000510500 DRC1Q96MC2 740 aa10.07□□□□□ -0.8
CAST-232ENST00000510500 HIRIP3Q9BW71 556 aaPredicted RBP10.07□□□□□ -0.8
CAST-232ENST00000510500 ONECUT3O60422 494 aaPredicted RBP10.06□□□□□ -0.8
CAST-232ENST00000510500 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.06□□□□□ -0.87e-19■■■■■ 104.3
CAST-232ENST00000510500 ZNF777Q9ULD5 760 aaPredicted RBP10.06□□□□□ -0.8
CAST-232ENST00000510500 BAZ1AQ9NRL2 1556 aaPredicted RBP10.06□□□□□ -0.8
CAST-232ENST00000510500 GEMIN8Q9NWZ8 242 aaKnown RBP10.05□□□□□ -0.8
CAST-232ENST00000510500 CDCA8Q53HL2 280 aa10.05□□□□□ -0.8
CAST-232ENST00000510500 SIRT1Q96EB6 747 aa10.05□□□□□ -0.8
CAST-232ENST00000510500 SMARCA2P51531 1590 aa10.04□□□□□ -0.8
CAST-232ENST00000510500 MCCD1P59942 119 aaPredicted RBP10.04□□□□□ -0.8
CAST-232ENST00000510500 SEMA3FQ13275 785 aa10.04□□□□□ -0.8
CAST-232ENST00000510500 MYBPC2Q14324 1141 aa10.04□□□□□ -0.8
CAST-232ENST00000510500 NRDCO43847 1150 aa10.03□□□□□ -0.8
CAST-232ENST00000510500 APBB1IPQ7Z5R6 666 aaPredicted RBP10.03□□□□□ -0.8
CAST-232ENST00000510500 HMGXB3Q12766 1538 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms