RNA–Protein interactions for RNA: ENST00000510335.5

PTPN20-224, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best)

Gene PTPN20, Length 1,153 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-224ENST00000510335 NUP153P49790 1475 aaKnown RBP11.51□□□□□ -0.57
PTPN20-224ENST00000510335 MRC2Q9UBG0 1479 aa11.51□□□□□ -0.57
PTPN20-224ENST00000510335 SHANK2Q9UPX8 1470 aa11.51□□□□□ -0.57
PTPN20-224ENST00000510335 DISP1Q96F81 1524 aa11.51□□□□□ -0.57
PTPN20-224ENST00000510335 HIRIP3Q9BW71 556 aaPredicted RBP11.51□□□□□ -0.57
PTPN20-224ENST00000510335 IFT140Q96RY7 1462 aa11.51□□□□□ -0.57
PTPN20-224ENST00000510335 RGL2O15211 777 aa11.5□□□□□ -0.57
PTPN20-224ENST00000510335 RNF123Q5XPI4 1314 aa11.5□□□□□ -0.57
PTPN20-224ENST00000510335 DCAF8Q5TAQ9 597 aa11.49□□□□□ -0.57
PTPN20-224ENST00000510335 ROCK2O75116 1388 aaKnown RBP11.49□□□□□ -0.57
PTPN20-224ENST00000510335 RALGAPBQ86X10 1494 aa11.49□□□□□ -0.57
PTPN20-224ENST00000510335 KDM5CP41229 1560 aa11.49□□□□□ -0.57
PTPN20-224ENST00000510335 SLC24A1O60721 1099 aa11.48□□□□□ -0.57
PTPN20-224ENST00000510335 L3MBTL2Q969R5 705 aa11.48□□□□□ -0.57
PTPN20-224ENST00000510335 KTN1Q86UP2 1357 aaKnown RBP11.48□□□□□ -0.57
PTPN20-224ENST00000510335 TROQ12816 1431 aaPredicted RBP11.48□□□□□ -0.57
PTPN20-224ENST00000510335 CAMSAP2Q08AD1 1489 aa11.47□□□□□ -0.57
PTPN20-224ENST00000510335 KIAA1107Q9UPP5 1409 aa11.47□□□□□ -0.57
PTPN20-224ENST00000510335 DHX29Q7Z478 1369 aaKnown RBP11.47□□□□□ -0.57
PTPN20-224ENST00000510335 KIF7Q2M1P5 1343 aa11.46□□□□□ -0.57
PTPN20-224ENST00000510335 RASEFQ8IZ41 740 aa11.46□□□□□ -0.57
PTPN20-224ENST00000510335 RRP7BPQ9NSQ0 103 aa11.46□□□□□ -0.57
PTPN20-224ENST00000510335 ZMYM4Q5VZL5 1548 aa11.45□□□□□ -0.58
PTPN20-224ENST00000510335 BCL11AQ9H165 835 aa11.45□□□□□ -0.58
PTPN20-224ENST00000510335 E9PCH4 1651 aa11.45□□□□□ -0.58
PTPN20-224ENST00000510335 GSE1Q14687 1217 aa11.44□□□□□ -0.58
PTPN20-224ENST00000510335 INSRP06213 1382 aa11.43□□□□□ -0.58
PTPN20-224ENST00000510335 PRKAR2AP13861 404 aaKnown RBP11.43□□□□□ -0.58
PTPN20-224ENST00000510335 FXR2P51116 673 aaKnown RBP eCLIP11.43□□□□□ -0.58
PTPN20-224ENST00000510335 GRIN2AQ12879 1464 aa11.43□□□□□ -0.58
PTPN20-224ENST00000510335 BCORL1Q5H9F3 1711 aa11.42□□□□□ -0.58
PTPN20-224ENST00000510335 PTPRGP23470 1445 aa11.42□□□□□ -0.58
PTPN20-224ENST00000510335 CEP170Q5SW79 1584 aa11.41□□□□□ -0.58
PTPN20-224ENST00000510335 GPATCH8Q9UKJ3 1502 aaKnown RBP11.41□□□□□ -0.58
PTPN20-224ENST00000510335 MAGI1Q96QZ7 1491 aaPredicted RBP11.41□□□□□ -0.58
PTPN20-224ENST00000510335 C11orf95C9JLR9 678 aaPredicted RBP11.41□□□□□ -0.58
PTPN20-224ENST00000510335 NPM1P06748 294 aaKnown RBP eCLIP11.41□□□□□ -0.58
PTPN20-224ENST00000510335 NBPF8Q3BBV2 869 aa11.41□□□□□ -0.58
PTPN20-224ENST00000510335 CHRDL2Q6WN34 429 aa11.41□□□□□ -0.58
PTPN20-224ENST00000510335 MRS2Q9HD23 443 aa11.41□□□□□ -0.58
PTPN20-224ENST00000510335 FARP1Q9Y4F1 1045 aaPredicted RBP11.41□□□□□ -0.58
PTPN20-224ENST00000510335 LAMC1P11047 1609 aa11.41□□□□□ -0.58
PTPN20-224ENST00000510335 ARHGEF5Q12774 1597 aa11.41□□□□□ -0.58
PTPN20-224ENST00000510335 FAM212AQ96EL1 285 aa11.4□□□□□ -0.58
PTPN20-224ENST00000510335 LRPPRCP42704 1394 aaKnown RBP11.4□□□□□ -0.59
PTPN20-224ENST00000510335 USP47Q96K76 1375 aa11.4□□□□□ -0.59
PTPN20-224ENST00000510335 NUDCQ9Y266 331 aa11.39□□□□□ -0.59
PTPN20-224ENST00000510335 CCDC184Q52MB2 194 aa11.38□□□□□ -0.59
PTPN20-224ENST00000510335 CHIC2Q9UKJ5 165 aa11.38□□□□□ -0.59
PTPN20-224ENST00000510335 ANKRD30AQ9BXX3 1397 aa11.38□□□□□ -0.59
PTPN20-224ENST00000510335 CDC42BPAQ5VT25 1732 aa11.38□□□□□ -0.59
PTPN20-224ENST00000510335 EIF4G3O43432 1585 aaKnown RBP11.37□□□□□ -0.59
PTPN20-224ENST00000510335 ERICH6Q7L0X2 663 aa11.37□□□□□ -0.59
PTPN20-224ENST00000510335 PIP4P2Q8N4L2 257 aa11.37□□□□□ -0.59
PTPN20-224ENST00000510335 ABCC10Q5T3U5 1492 aa11.37□□□□□ -0.59
PTPN20-224ENST00000510335 ABCA8O94911 1581 aa11.37□□□□□ -0.59
PTPN20-224ENST00000510335 RNF25Q96BH1 459 aaPredicted RBP11.36□□□□□ -0.59
PTPN20-224ENST00000510335 BRD4O60885 1362 aaPredicted RBP11.36□□□□□ -0.59
PTPN20-224ENST00000510335 KIF15Q9NS87 1388 aa11.36□□□□□ -0.59
PTPN20-224ENST00000510335 NUP160Q12769 1436 aa11.35□□□□□ -0.59
PTPN20-224ENST00000510335 ANKRD50Q9ULJ7 1429 aa11.35□□□□□ -0.59
PTPN20-224ENST00000510335 MAST1Q9Y2H9 1570 aa11.33□□□□□ -0.6
PTPN20-224ENST00000510335 SYNJ2O15056 1496 aa11.33□□□□□ -0.6
PTPN20-224ENST00000510335 TSPYL2Q9H2G4 693 aaPredicted RBP11.33□□□□□ -0.6
PTPN20-224ENST00000510335 PRG4Q92954 1404 aaPredicted RBP11.32□□□□□ -0.6
PTPN20-224ENST00000510335 PLEKHH2Q8IVE3 1493 aa11.32□□□□□ -0.6
PTPN20-224ENST00000510335 GPRASP1Q5JY77 1395 aa11.31□□□□□ -0.6
PTPN20-224ENST00000510335 ZNF608Q9ULD9 1512 aaPredicted RBP11.31□□□□□ -0.6
PTPN20-224ENST00000510335 PYGBP11216 843 aa11.31□□□□□ -0.6
PTPN20-224ENST00000510335 PLCB2Q00722 1185 aa11.31□□□□□ -0.6
PTPN20-224ENST00000510335 FAM9BQ8IZU0 186 aa11.31□□□□□ -0.6
PTPN20-224ENST00000510335 C9orf84Q5VXU9 1444 aa11.31□□□□□ -0.6
PTPN20-224ENST00000510335 CARMIL2Q6F5E8 1435 aa11.31□□□□□ -0.6
PTPN20-224ENST00000510335 UNC13BO14795 1591 aa11.31□□□□□ -0.6
PTPN20-224ENST00000510335 IRX6P78412 446 aaPredicted RBP11.3□□□□□ -0.6
PTPN20-224ENST00000510335 RALBP1Q15311 655 aa11.3□□□□□ -0.6
PTPN20-224ENST00000510335 TRPM1Q7Z4N2 1603 aa11.3□□□□□ -0.6
PTPN20-224ENST00000510335 EIF2AK4Q9P2K8 1649 aaKnown RBP11.3□□□□□ -0.6
PTPN20-224ENST00000510335 CHGAP10645 457 aaKnown RBP11.29□□□□□ -0.6
PTPN20-224ENST00000510335 PNISRQ8TF01 805 aaKnown RBP11.29□□□□□ -0.6
PTPN20-224ENST00000510335 CFDP1Q9UEE9 299 aaPredicted RBP11.29□□□□□ -0.6
PTPN20-224ENST00000510335 NOP58Q9Y2X3 529 aaKnown RBP11.29□□□□□ -0.6
PTPN20-224ENST00000510335 MYBBP1AQ9BQG0 1328 aaKnown RBP11.29□□□□□ -0.6
PTPN20-224ENST00000510335 CHRM1P11229 460 aaPredicted RBP11.28□□□□□ -0.6
PTPN20-224ENST00000510335 PDE3BQ13370 1112 aa11.28□□□□□ -0.6
PTPN20-224ENST00000510335 ZNF644Q9H582 1327 aaPredicted RBP11.28□□□□□ -0.6
PTPN20-224ENST00000510335 WASHC2CQ9Y4E1 1318 aa11.28□□□□□ -0.6
PTPN20-224ENST00000510335 PARD3Q8TEW0 1356 aa11.28□□□□□ -0.6
PTPN20-224ENST00000510335 PREX2Q70Z35 1606 aa11.27□□□□□ -0.6
PTPN20-224ENST00000510335 ATP10AO60312 1499 aa11.27□□□□□ -0.6
PTPN20-224ENST00000510335 PLB1Q6P1J6 1458 aa11.27□□□□□ -0.6
PTPN20-224ENST00000510335 PRDM15P57071 1507 aaPredicted RBP11.27□□□□□ -0.61
PTPN20-224ENST00000510335 B4GALNT3Q6L9W6 998 aa11.27□□□□□ -0.61
PTPN20-224ENST00000510335 BBXQ8WY36 941 aaPredicted RBP11.27□□□□□ -0.61
PTPN20-224ENST00000510335 PLXNC1O60486 1568 aa11.27□□□□□ -0.61
PTPN20-224ENST00000510335 BLMP54132 1417 aaPredicted RBP11.26□□□□□ -0.61
PTPN20-224ENST00000510335 CCDC141Q6ZP82 1450 aa11.26□□□□□ -0.61
PTPN20-224ENST00000510335 MAGI2Q86UL8 1455 aa11.26□□□□□ -0.61
PTPN20-224ENST00000510335 COL17A1Q9UMD9 1497 aaPredicted RBP11.26□□□□□ -0.61
PTPN20-224ENST00000510335 RNF17Q9BXT8 1623 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms