RNA–Protein interactions for RNA: ENST00000510281.1

TRIO-215, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-215ENST00000510281 DHX29Q7Z478 1369 aaKnown RBP31.75■■■□□ 2.67
TRIO-215ENST00000510281 A2ML1A8K2U0 1454 aa31.73■■■□□ 2.67
TRIO-215ENST00000510281 MAP3K1Q13233 1512 aa31.7■■■□□ 2.67
TRIO-215ENST00000510281 KANK4Q5T7N3 995 aaPredicted RBP31.7■■■□□ 2.67
TRIO-215ENST00000510281 DNMT1P26358 1616 aaKnown RBP31.67■■■□□ 2.66
TRIO-215ENST00000510281 FAM135AQ9P2D6 1515 aa31.67■■■□□ 2.66
TRIO-215ENST00000510281 UBAP1LF5GYI3 381 aa31.67■■■□□ 2.66
TRIO-215ENST00000510281 CCDC141Q6ZP82 1450 aa31.65■■■□□ 2.66
TRIO-215ENST00000510281 PZPP20742 1482 aa31.62■■■□□ 2.65
TRIO-215ENST00000510281 RSPH4AQ5TD94 716 aa31.62■■■□□ 2.65
TRIO-215ENST00000510281 TNRQ92752 1358 aa31.62■■■□□ 2.65
TRIO-215ENST00000510281 KDM5DQ9BY66 1539 aa31.61■■■□□ 2.65
TRIO-215ENST00000510281 CAMSAP2Q08AD1 1489 aa31.6■■■□□ 2.65
TRIO-215ENST00000510281 KIF3BO15066 747 aa31.6■■■□□ 2.65
TRIO-215ENST00000510281 PHF23Q9BUL5 403 aaPredicted RBP31.59■■■□□ 2.65
TRIO-215ENST00000510281 FBXO31Q5XUX0 539 aaPredicted RBP31.58■■■□□ 2.65
TRIO-215ENST00000510281 NEURL4Q96JN8 1562 aa31.56■■■□□ 2.64
TRIO-215ENST00000510281 CPS1P31327 1500 aa31.53■■■□□ 2.64
TRIO-215ENST00000510281 WASHC2CQ9Y4E1 1318 aa31.52■■■□□ 2.64
TRIO-215ENST00000510281 ARHGEF5Q12774 1597 aa31.51■■■□□ 2.64
TRIO-215ENST00000510281 POLR1AO95602 1720 aaPredicted RBP31.51■■■□□ 2.63
TRIO-215ENST00000510281 APLP2Q06481 763 aa31.5■■■□□ 2.63
TRIO-215ENST00000510281 NLRP1Q9C000 1473 aa31.5■■■□□ 2.63
TRIO-215ENST00000510281 MIA2Q96PC5 1412 aa31.49■■■□□ 2.63
TRIO-215ENST00000510281 SHANK2Q9UPX8 1470 aa31.49■■■□□ 2.63
TRIO-215ENST00000510281 MYOM3Q5VTT5 1437 aa31.48■■■□□ 2.63
TRIO-215ENST00000510281 ANKLE2Q86XL3 938 aa31.46■■■□□ 2.63
TRIO-215ENST00000510281 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.45■■■□□ 2.63
TRIO-215ENST00000510281 THEMISQ8N1K5 641 aaPredicted RBP31.45■■■□□ 2.63
TRIO-215ENST00000510281 TSPY4P0CV99 314 aa31.44■■■□□ 2.62
TRIO-215ENST00000510281 TSPY10P0CW01 314 aa31.44■■■□□ 2.62
TRIO-215ENST00000510281 MED14O60244 1454 aa31.44■■■□□ 2.62
TRIO-215ENST00000510281 VWDEQ8N2E2 1590 aa31.42■■■□□ 2.62
TRIO-215ENST00000510281 UGGT1Q9NYU2 1555 aa31.42■■■□□ 2.62
TRIO-215ENST00000510281 TOM1O60784 492 aa31.41■■■□□ 2.62
TRIO-215ENST00000510281 DEPDC5O75140 1603 aa31.4■■■□□ 2.62
TRIO-215ENST00000510281 RNF17Q9BXT8 1623 aaKnown RBP31.39■■■□□ 2.62
TRIO-215ENST00000510281 HSPA1LP34931 641 aa31.39■■■□□ 2.62
TRIO-215ENST00000510281 NPHP4O75161 1426 aaPredicted RBP31.39■■■□□ 2.62
TRIO-215ENST00000510281 MAST1Q9Y2H9 1570 aa31.38■■■□□ 2.61
TRIO-215ENST00000510281 ABCC3O15438 1527 aa31.36■■■□□ 2.61
TRIO-215ENST00000510281 PIP4K2BP78356 416 aa31.34■■■□□ 2.61
TRIO-215ENST00000510281 ZC3H13Q5T200 1668 aaKnown RBP31.33■■■□□ 2.61
TRIO-215ENST00000510281 SCAF1Q9H7N4 1312 aaKnown RBP31.32■■■□□ 2.6
TRIO-215ENST00000510281 EIF2AK4Q9P2K8 1649 aaKnown RBP31.31■■■□□ 2.6
TRIO-215ENST00000510281 MED1Q15648 1581 aaPredicted RBP31.3■■■□□ 2.6
TRIO-215ENST00000510281 ERVK-7P63135 1459 aa31.29■■■□□ 2.6
TRIO-215ENST00000510281 PTPN23Q9H3S7 1636 aa31.29■■■□□ 2.6
TRIO-215ENST00000510281 ALKQ9UM73 1620 aa31.29■■■□□ 2.6
TRIO-215ENST00000510281 IQGAP1P46940 1657 aa31.29■■■□□ 2.6
TRIO-215ENST00000510281 FGD6Q6ZV73 1430 aa31.27■■■□□ 2.6
TRIO-215ENST00000510281 MROH1Q8NDA8 1641 aa31.27■■■□□ 2.6
TRIO-215ENST00000510281 LRRC7Q96NW7 1537 aa31.2■■■□□ 2.59
TRIO-215ENST00000510281 ABCC5O15440 1437 aa31.19■■■□□ 2.58
TRIO-215ENST00000510281 DUOX2Q9NRD8 1548 aa31.19■■■□□ 2.58
TRIO-215ENST00000510281 SYNMO15061 1565 aa31.17■■■□□ 2.58
TRIO-215ENST00000510281 CROCC2H7BZ55 1655 aa31.17■■■□□ 2.58
TRIO-215ENST00000510281 STRCP1A6NGW2 1772 aa31.17■■■□□ 2.58
TRIO-215ENST00000510281 UBR1Q8IWV7 1749 aa31.15■■■□□ 2.58
TRIO-215ENST00000510281 DAPK1P53355 1430 aa31.15■■■□□ 2.58
TRIO-215ENST00000510281 ARHGAP31Q2M1Z3 1444 aa31.15■■■□□ 2.58
TRIO-215ENST00000510281 SCAF11Q99590 1463 aaKnown RBP31.14■■■□□ 2.57
TRIO-215ENST00000510281 ARHGAP23Q9P227 1491 aa31.14■■■□□ 2.57
TRIO-215ENST00000510281 CEP152O94986 1710 aa31.12■■■□□ 2.57
TRIO-215ENST00000510281 SLIT1O75093 1534 aa31.12■■■□□ 2.57
TRIO-215ENST00000510281 PRDM15P57071 1507 aaPredicted RBP31.12■■■□□ 2.57
TRIO-215ENST00000510281 ERBINQ96RT1 1412 aa31.09■■■□□ 2.57
TRIO-215ENST00000510281 KIF15Q9NS87 1388 aa31.08■■■□□ 2.57
TRIO-215ENST00000510281 LTKP29376 864 aa31.07■■■□□ 2.56
TRIO-215ENST00000510281 PPARGC1BQ86YN6 1023 aaKnown RBP31.06■■■□□ 2.56
TRIO-215ENST00000510281 TXNDC2Q86VQ3 553 aa31.04■■■□□ 2.56
TRIO-215ENST00000510281 FAM50AQ14320 339 aaKnown RBP31.03■■■□□ 2.56
TRIO-215ENST00000510281 RRP7BPQ9NSQ0 103 aa31.01■■■□□ 2.55
TRIO-215ENST00000510281 CHIC2Q9UKJ5 165 aa31■■■□□ 2.55
TRIO-215ENST00000510281 TMEM2Q9UHN6 1383 aa30.98■■■□□ 2.55
TRIO-215ENST00000510281 EID1Q9Y6B2 187 aa30.98■■■□□ 2.55
TRIO-215ENST00000510281 CFAP65Q6ZU64 1925 aaKnown RBP30.98■■■□□ 2.55
TRIO-215ENST00000510281 PIK3C2BO00750 1634 aa30.95■■■□□ 2.54
TRIO-215ENST00000510281 LMTK2Q8IWU2 1503 aa30.94■■■□□ 2.54
TRIO-215ENST00000510281 ANKRD30AQ9BXX3 1397 aa30.93■■■□□ 2.54
TRIO-215ENST00000510281 KANK1Q14678 1352 aa30.92■■■□□ 2.54
TRIO-215ENST00000510281 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.92■■■□□ 2.54
TRIO-215ENST00000510281 ADGRL2O95490 1459 aa30.92■■■□□ 2.54
TRIO-215ENST00000510281 KDM5AP29375 1690 aaKnown RBP30.91■■■□□ 2.54
TRIO-215ENST00000510281 XIRP1Q702N8 1843 aaKnown RBP30.89■■■□□ 2.54
TRIO-215ENST00000510281 EFCAB6Q5THR3 1501 aa30.88■■■□□ 2.53
TRIO-215ENST00000510281 FAM135BQ49AJ0 1406 aa30.88■■■□□ 2.53
TRIO-215ENST00000510281 IDI1Q13907 227 aa30.87■■■□□ 2.53
TRIO-215ENST00000510281 STAG3Q9UJ98 1225 aa30.86■■■□□ 2.53
TRIO-215ENST00000510281 NOS1P29475 1434 aa30.84■■■□□ 2.53
TRIO-215ENST00000510281 TMEM94Q12767 1356 aa30.83■■■□□ 2.53
TRIO-215ENST00000510281 KCNA6P17658 529 aa30.83■■■□□ 2.53
TRIO-215ENST00000510281 TET3O43151 1660 aa30.83■■■□□ 2.53
TRIO-215ENST00000510281 RGS17Q9UGC6 210 aaPredicted RBP30.82■■■□□ 2.52
TRIO-215ENST00000510281 ADGRB3O60242 1522 aa30.78■■■□□ 2.52
TRIO-215ENST00000510281 SLC52A1Q9NWF4 448 aa30.75■■■□□ 2.51
TRIO-215ENST00000510281 ANKRD50Q9ULJ7 1429 aa30.74■■■□□ 2.51
TRIO-215ENST00000510281 ITGAEP38570 1179 aa30.74■■■□□ 2.51
TRIO-215ENST00000510281 SLC26A8Q96RN1 970 aa30.74■■■□□ 2.51
TRIO-215ENST00000510281 NKTRP30414 1462 aaKnown RBP30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms