RNA–Protein interactions for RNA: ENST00000509712.5

CCDC30-213, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-213ENST00000509712 EN1Q05925 392 aaPredicted RBP8.31□□□□□ -1.08
CCDC30-213ENST00000509712 JPH4Q96JJ6 628 aa8.31□□□□□ -1.08
CCDC30-213ENST00000509712 EPAS1Q99814 870 aa8.3□□□□□ -1.08
CCDC30-213ENST00000509712 FOSBP53539 338 aa8.29□□□□□ -1.08
CCDC30-213ENST00000509712 NUTM2FA1L443 756 aa8.27□□□□□ -1.09
CCDC30-213ENST00000509712 PTGDRQ13258 359 aa8.27□□□□□ -1.09
CCDC30-213ENST00000509712 CDHR5Q9HBB8 845 aa8.27□□□□□ -1.09
CCDC30-213ENST00000509712 BRPF1P55201 1214 aaPredicted RBP8.27□□□□□ -1.09
CCDC30-213ENST00000509712 TYW1BQ6NUM6 668 aa8.27□□□□□ -1.09
CCDC30-213ENST00000509712 NPDC1Q9NQX5 325 aaPredicted RBP8.27□□□□□ -1.09
CCDC30-213ENST00000509712 LHX6Q9UPM6 363 aa8.27□□□□□ -1.09
CCDC30-213ENST00000509712 HIC1Q14526 733 aa8.26□□□□□ -1.09
CCDC30-213ENST00000509712 FBXW7Q969H0 707 aa8.26□□□□□ -1.09
CCDC30-213ENST00000509712 GNPATO15228 680 aa8.25□□□□□ -1.09
CCDC30-213ENST00000509712 FCHSD2O94868 740 aa8.25□□□□□ -1.09
CCDC30-213ENST00000509712 FECHP22830 423 aa8.25□□□□□ -1.09
CCDC30-213ENST00000509712 TSR1Q2NL82 804 aaKnown RBP8.25□□□□□ -1.09
CCDC30-213ENST00000509712 MAP2K5Q13163 448 aa8.23□□□□□ -1.09
CCDC30-213ENST00000509712 AK7Q96M32 723 aa8.23□□□□□ -1.09
CCDC30-213ENST00000509712 MAP3K7O43318 606 aa8.22□□□□□ -1.09
CCDC30-213ENST00000509712 ZNF454Q8N9F8 522 aa8.22□□□□□ -1.09
CCDC30-213ENST00000509712 ERBB3P21860 1342 aa8.22□□□□□ -1.09
CCDC30-213ENST00000509712 ZDHHC16Q969W1 377 aa8.22□□□□□ -1.09
CCDC30-213ENST00000509712 RBM33Q96EV2 1170 aaKnown RBP8.22□□□□□ -1.09
CCDC30-213ENST00000509712 MINK1Q8N4C8 1332 aaPredicted RBP8.21□□□□□ -1.1
CCDC30-213ENST00000509712 TRIM66O15016 1216 aa8.21□□□□□ -1.1
CCDC30-213ENST00000509712 CCDC102AQ96A19 550 aa8.21□□□□□ -1.1
CCDC30-213ENST00000509712 RNF166Q96A37 237 aaPredicted RBP8.21□□□□□ -1.1
CCDC30-213ENST00000509712 ADAM33Q9BZ11 813 aa8.21□□□□□ -1.1
CCDC30-213ENST00000509712 IRF6O14896 467 aa8.2□□□□□ -1.1
CCDC30-213ENST00000509712 PSDA5PKW4 1024 aaPredicted RBP8.19□□□□□ -1.1
CCDC30-213ENST00000509712 C6orf132Q5T0Z8 1188 aa8.19□□□□□ -1.1
CCDC30-213ENST00000509712 KRI1Q8N9T8 703 aaKnown RBP8.19□□□□□ -1.1
CCDC30-213ENST00000509712 PPP4R3BQ5MIZ7 849 aa8.18□□□□□ -1.1
CCDC30-213ENST00000509712 VARS2Q5ST30 1063 aaKnown RBP8.18□□□□□ -1.1
CCDC30-213ENST00000509712 NEUROD2Q15784 382 aa8.17□□□□□ -1.1
CCDC30-213ENST00000509712 BCL2L12Q9HB09 334 aa8.17□□□□□ -1.1
CCDC30-213ENST00000509712 PDE4DQ08499 809 aa8.16□□□□□ -1.1
CCDC30-213ENST00000509712 TTC13Q8NBP0 860 aa8.16□□□□□ -1.1
CCDC30-213ENST00000509712 AMHR2Q16671 573 aa8.15□□□□□ -1.1
CCDC30-213ENST00000509712 CERKQ8TCT0 537 aa8.15□□□□□ -1.1
CCDC30-213ENST00000509712 RBM27Q9P2N5 1060 aaKnown RBP8.15□□□□□ -1.1
CCDC30-213ENST00000509712 GPBP1L1Q9HC44 474 aaPredicted RBP8.14□□□□□ -1.11
CCDC30-213ENST00000509712 MYT1LQ9UL68 1186 aa8.14□□□□□ -1.11
CCDC30-213ENST00000509712 TMEM132AQ24JP5 1023 aa8.14□□□□□ -1.11
CCDC30-213ENST00000509712 COL9A1P20849 921 aa8.13□□□□□ -1.11
CCDC30-213ENST00000509712 PADI6Q6TGC4 694 aa8.13□□□□□ -1.11
CCDC30-213ENST00000509712 POTEEQ6S8J3 1075 aa8.11□□□□□ -1.11
CCDC30-213ENST00000509712 PARP9Q8IXQ6 854 aa8.11□□□□□ -1.11
CCDC30-213ENST00000509712 ZNF687Q8N1G0 1237 aa8.11□□□□□ -1.11
CCDC30-213ENST00000509712 PHOX2BQ99453 314 aa8.11□□□□□ -1.11
CCDC30-213ENST00000509712 FAM198AQ9UFP1 575 aa8.11□□□□□ -1.11
CCDC30-213ENST00000509712 PPP1R3GB7ZBB8 358 aa8.1□□□□□ -1.11
CCDC30-213ENST00000509712 KDM4CQ9H3R0 1056 aa8.1□□□□□ -1.11
CCDC30-213ENST00000509712 PTPREP23469 700 aa8.1□□□□□ -1.11
CCDC30-213ENST00000509712 PRSS12P56730 875 aa8.1□□□□□ -1.11
CCDC30-213ENST00000509712 CDCA7LQ96GN5 454 aa8.1□□□□□ -1.11
CCDC30-213ENST00000509712 TMUB1Q9BVT8 246 aa8.1□□□□□ -1.11
CCDC30-213ENST00000509712 ADGRG1Q9Y653 693 aa8.1□□□□□ -1.11
CCDC30-213ENST00000509712 KCNK17Q96T54 332 aa8.09□□□□□ -1.11
CCDC30-213ENST00000509712 REPIN1Q9BWE0 567 aaKnown RBP8.09□□□□□ -1.11
CCDC30-213ENST00000509712 FAM161AQ3B820 660 aa8.08□□□□□ -1.12
CCDC30-213ENST00000509712 METTL3Q86U44 580 aaKnown RBP8.08□□□□□ -1.12
CCDC30-213ENST00000509712 AXIN2Q9Y2T1 843 aa8.08□□□□□ -1.12
CCDC30-213ENST00000509712 PBX2P40425 430 aa8.07□□□□□ -1.12
CCDC30-213ENST00000509712 PSEN2P49810 448 aa8.07□□□□□ -1.12
CCDC30-213ENST00000509712 PXYLP1Q8TE99 480 aa8.07□□□□□ -1.12
CCDC30-213ENST00000509712 TSKSQ9UJT2 592 aa8.07□□□□□ -1.12
CCDC30-213ENST00000509712 ARHGAP33O14559 1287 aa8.06□□□□□ -1.12
CCDC30-213ENST00000509712 C3orf80F5H4A9 247 aa8.05□□□□□ -1.12
CCDC30-213ENST00000509712 DMRTA1Q5VZB9 504 aa8.05□□□□□ -1.12
CCDC30-213ENST00000509712 TRIM6-TRIM34B2RNG4 842 aa8.04□□□□□ -1.12
CCDC30-213ENST00000509712 OATP04181 439 aa8.04□□□□□ -1.12
CCDC30-213ENST00000509712 GIGYF2Q6Y7W6 1299 aaKnown RBP8.04□□□□□ -1.12
CCDC30-213ENST00000509712 KCNH8Q96L42 1107 aa8.04□□□□□ -1.12
CCDC30-213ENST00000509712 ZBED2Q9BTP6 218 aa8.04□□□□□ -1.12
CCDC30-213ENST00000509712 EYA1Q99502 592 aa8.03□□□□□ -1.12
CCDC30-213ENST00000509712 FAM117AQ9C073 453 aa8.03□□□□□ -1.12
CCDC30-213ENST00000509712 PLEKHG3A1L390 1219 aa8.02□□□□□ -1.13
CCDC30-213ENST00000509712 MS4A1P11836 297 aa8.02□□□□□ -1.13
CCDC30-213ENST00000509712 TTLL12Q14166 644 aaPredicted RBP8.02□□□□□ -1.13
CCDC30-213ENST00000509712 PROX2Q3B8N5 592 aa8.02□□□□□ -1.13
CCDC30-213ENST00000509712 ONECUT3O60422 494 aaPredicted RBP8.01□□□□□ -1.13
CCDC30-213ENST00000509712 MDM2Q00987 491 aaPredicted RBP8.01□□□□□ -1.13
CCDC30-213ENST00000509712 ANKRD13DQ6ZTN6 518 aa8.01□□□□□ -1.13
CCDC30-213ENST00000509712 NLRP7Q8WX94 980 aa8.01□□□□□ -1.13
CCDC30-213ENST00000509712 GPCPD1Q9NPB8 672 aa8.01□□□□□ -1.13
CCDC30-213ENST00000509712 CLCN1P35523 988 aa8.01□□□□□ -1.13
CCDC30-213ENST00000509712 LSM11P83369 360 aaKnown RBP eCLIP8□□□□□ -1.13
CCDC30-213ENST00000509712 RBM46Q8TBY0 533 aaKnown RBP8□□□□□ -1.13
CCDC30-213ENST00000509712 SLC4A5Q9BY07 1137 aa8□□□□□ -1.13
CCDC30-213ENST00000509712 IL27Q8NEV9 243 aa7.99□□□□□ -1.13
CCDC30-213ENST00000509712 FAM217BQ9NTX9 383 aaPredicted RBP7.99□□□□□ -1.13
CCDC30-213ENST00000509712 NBPF26B4DH59 902 aa7.98□□□□□ -1.13
CCDC30-213ENST00000509712 NUDT18Q6ZVK8 323 aa7.98□□□□□ -1.13
CCDC30-213ENST00000509712 TATDN2Q93075 761 aa7.98□□□□□ -1.13
CCDC30-213ENST00000509712 DDRGK1Q96HY6 314 aa7.98□□□□□ -1.13
CCDC30-213ENST00000509712 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.97□□□□□ -1.13
CCDC30-213ENST00000509712 VPS9D1Q9Y2B5 631 aa7.97□□□□□ -1.13
CCDC30-213ENST00000509712 RCCD1A6NED2 376 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms