RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.77■■□□□ 1.249e-7■■□□□ 13.3
HMGCR-208ENST00000509431 IQGAP1P46940 1657 aa22.77■■□□□ 1.24
HMGCR-208ENST00000509431 ADGBQ8N7X0 1667 aa22.76■■□□□ 1.23
HMGCR-208ENST00000509431 STRCP1A6NGW2 1772 aa22.76■■□□□ 1.23
HMGCR-208ENST00000509431 ARHGAP35Q9NRY4 1499 aa22.75■■□□□ 1.23
HMGCR-208ENST00000509431 KIAA1107Q9UPP5 1409 aa22.74■■□□□ 1.23
HMGCR-208ENST00000509431 ZNF777Q9ULD5 760 aaPredicted RBP22.74■■□□□ 1.23
HMGCR-208ENST00000509431 CCDC18Q5T9S5 1454 aa22.73■■□□□ 1.23
HMGCR-208ENST00000509431 PLEKHH2Q8IVE3 1493 aa22.73■■□□□ 1.23
HMGCR-208ENST00000509431 NLRP1Q9C000 1473 aa22.73■■□□□ 1.23
HMGCR-208ENST00000509431 FAM135AQ9P2D6 1515 aa22.73■■□□□ 1.23
HMGCR-208ENST00000509431 HNRNPMP52272 730 aaKnown RBP eCLIP22.73■■□□□ 1.231e-7■■■■■ 40.9
HMGCR-208ENST00000509431 PZPP20742 1482 aa22.73■■□□□ 1.23
HMGCR-208ENST00000509431 UGGT1Q9NYU2 1555 aa22.72■■□□□ 1.23
HMGCR-208ENST00000509431 SETD1AO15047 1707 aaKnown RBP22.71■■□□□ 1.23
HMGCR-208ENST00000509431 FBXO31Q5XUX0 539 aaPredicted RBP22.69■■□□□ 1.22
HMGCR-208ENST00000509431 FAM135BQ49AJ0 1406 aa22.67■■□□□ 1.22
HMGCR-208ENST00000509431 MIA2Q96PC5 1412 aa22.66■■□□□ 1.22
HMGCR-208ENST00000509431 KDM5DQ9BY66 1539 aa22.65■■□□□ 1.22
HMGCR-208ENST00000509431 GPATCH8Q9UKJ3 1502 aaKnown RBP22.65■■□□□ 1.22
HMGCR-208ENST00000509431 CASKIN1Q8WXD9 1431 aa22.6■■□□□ 1.21
HMGCR-208ENST00000509431 UBTFP17480 764 aaKnown RBP22.6■■□□□ 1.21
HMGCR-208ENST00000509431 UPF1Q92900 1129 aaKnown RBP eCLIP22.6■■□□□ 1.21
HMGCR-208ENST00000509431 DHX29Q7Z478 1369 aaKnown RBP22.6■■□□□ 1.21
HMGCR-208ENST00000509431 CFDP1Q9UEE9 299 aaPredicted RBP22.59■■□□□ 1.21
HMGCR-208ENST00000509431 ZC3H13Q5T200 1668 aaKnown RBP22.58■■□□□ 1.21
HMGCR-208ENST00000509431 RTEL1-TNFRSF6BF6WH68 1400 aa22.58■■□□□ 1.21
HMGCR-208ENST00000509431 XIRP1Q702N8 1843 aaKnown RBP22.58■■□□□ 1.21
HMGCR-208ENST00000509431 WASHC2CQ9Y4E1 1318 aa22.57■■□□□ 1.2
HMGCR-208ENST00000509431 KIF3BO15066 747 aa22.54■■□□□ 1.2
HMGCR-208ENST00000509431 ROBO1Q9Y6N7 1651 aa22.51■■□□□ 1.19
HMGCR-208ENST00000509431 CCNB3Q8WWL7 1395 aa22.5■■□□□ 1.19
HMGCR-208ENST00000509431 SCAF11Q99590 1463 aaKnown RBP22.49■■□□□ 1.19
HMGCR-208ENST00000509431 LRRC9Q6ZRR7 1453 aa22.48■■□□□ 1.19
HMGCR-208ENST00000509431 JCADQ9P266 1359 aa22.46■■□□□ 1.19
HMGCR-208ENST00000509431 FYCO1Q9BQS8 1478 aa22.46■■□□□ 1.19
HMGCR-208ENST00000509431 MBD5Q9P267 1494 aa22.46■■□□□ 1.19
HMGCR-208ENST00000509431 ZNF772Q68DY9 489 aaPredicted RBP22.44■■□□□ 1.18
HMGCR-208ENST00000509431 UBR1Q8IWV7 1749 aa22.43■■□□□ 1.18
HMGCR-208ENST00000509431 PHLPP1O60346 1717 aa22.4■■□□□ 1.18
HMGCR-208ENST00000509431 TMEM94Q12767 1356 aa22.4■■□□□ 1.18
HMGCR-208ENST00000509431 EHMT2Q96KQ7 1210 aa22.4■■□□□ 1.18
HMGCR-208ENST00000509431 SLIT1O75093 1534 aa22.4■■□□□ 1.18
HMGCR-208ENST00000509431 ARHGAP23Q9P227 1491 aa22.4■■□□□ 1.18
HMGCR-208ENST00000509431 TXNDC2Q86VQ3 553 aa22.39■■□□□ 1.17
HMGCR-208ENST00000509431 TRIM52Q96A61 297 aa22.39■■□□□ 1.17
HMGCR-208ENST00000509431 ERVK-7P63135 1459 aa22.39■■□□□ 1.17
HMGCR-208ENST00000509431 LTKP29376 864 aa22.37■■□□□ 1.17
HMGCR-208ENST00000509431 ZNF644Q9H582 1327 aaPredicted RBP22.36■■□□□ 1.17
HMGCR-208ENST00000509431 CDK12Q9NYV4 1490 aaPredicted RBP22.36■■□□□ 1.17
HMGCR-208ENST00000509431 EID1Q9Y6B2 187 aa22.36■■□□□ 1.17
HMGCR-208ENST00000509431 NCOA2Q15596 1464 aa22.35■■□□□ 1.17
HMGCR-208ENST00000509431 SPATA31A6Q5VVP1 1343 aa22.35■■□□□ 1.17
HMGCR-208ENST00000509431 MAP3K1Q13233 1512 aa22.35■■□□□ 1.17
HMGCR-208ENST00000509431 ABCC3O15438 1527 aa22.34■■□□□ 1.17
HMGCR-208ENST00000509431 CCDC141Q6ZP82 1450 aa22.34■■□□□ 1.17
HMGCR-208ENST00000509431 KCNA6P17658 529 aa22.33■■□□□ 1.17
HMGCR-208ENST00000509431 RXRBP28702 533 aa22.33■■□□□ 1.17
HMGCR-208ENST00000509431 RSPH4AQ5TD94 716 aa22.33■■□□□ 1.17
HMGCR-208ENST00000509431 MEX3CQ5U5Q3 659 aaKnown RBP22.33■■□□□ 1.17
HMGCR-208ENST00000509431 FGD6Q6ZV73 1430 aa22.32■■□□□ 1.16
HMGCR-208ENST00000509431 TIAM1Q13009 1591 aa22.32■■□□□ 1.16
HMGCR-208ENST00000509431 MTUS2Q5JR59 1369 aa22.31■■□□□ 1.16
HMGCR-208ENST00000509431 PROSER2Q86WR7 435 aaPredicted RBP22.31■■□□□ 1.16
HMGCR-208ENST00000509431 LRP6O75581 1613 aa22.3■■□□□ 1.16
HMGCR-208ENST00000509431 MSH6P52701 1360 aa22.29■■□□□ 1.16
HMGCR-208ENST00000509431 COL16A1Q07092 1604 aaPredicted RBP22.29■■□□□ 1.16
HMGCR-208ENST00000509431 PRDM15P57071 1507 aaPredicted RBP22.29■■□□□ 1.16
HMGCR-208ENST00000509431 CFAP65Q6ZU64 1925 aaKnown RBP22.28■■□□□ 1.16
HMGCR-208ENST00000509431 SLAIN2Q9P270 581 aa22.28■■□□□ 1.16
HMGCR-208ENST00000509431 NKTRP30414 1462 aaKnown RBP22.28■■□□□ 1.16
HMGCR-208ENST00000509431 SRCAPQ6ZRS2 3230 aa22.25■■□□□ 1.15
HMGCR-208ENST00000509431 CHIC1Q5VXU3 224 aa22.25■■□□□ 1.15
HMGCR-208ENST00000509431 CAMSAP2Q08AD1 1489 aa22.24■■□□□ 1.15
HMGCR-208ENST00000509431 FOXD1Q16676 465 aa22.24■■□□□ 1.15
HMGCR-208ENST00000509431 TMEM2Q9UHN6 1383 aa22.23■■□□□ 1.15
HMGCR-208ENST00000509431 NWD1Q149M9 1564 aa22.22■■□□□ 1.15
HMGCR-208ENST00000509431 SHPRHQ149N8 1683 aa22.22■■□□□ 1.15
HMGCR-208ENST00000509431 EIF2AK4Q9P2K8 1649 aaKnown RBP22.21■■□□□ 1.15
HMGCR-208ENST00000509431 TSPY4P0CV99 314 aa22.19■■□□□ 1.14
HMGCR-208ENST00000509431 TSPY10P0CW01 314 aa22.19■■□□□ 1.14
HMGCR-208ENST00000509431 RBM33Q96EV2 1170 aaKnown RBP22.19■■□□□ 1.14
HMGCR-208ENST00000509431 EHBP1L1Q8N3D4 1523 aa22.19■■□□□ 1.14
HMGCR-208ENST00000509431 CEP152O94986 1710 aa22.19■■□□□ 1.14
HMGCR-208ENST00000509431 KDM5AP29375 1690 aaKnown RBP22.18■■□□□ 1.14
HMGCR-208ENST00000509431 CEP162Q5TB80 1403 aa22.18■■□□□ 1.14
HMGCR-208ENST00000509431 TET3O43151 1660 aa22.17■■□□□ 1.14
HMGCR-208ENST00000509431 ARHGEF5Q12774 1597 aa22.17■■□□□ 1.14
HMGCR-208ENST00000509431 ARHGAP31Q2M1Z3 1444 aa22.16■■□□□ 1.14
HMGCR-208ENST00000509431 PIK3C2BO00750 1634 aa22.16■■□□□ 1.14
HMGCR-208ENST00000509431 MROH1Q8NDA8 1641 aa22.16■■□□□ 1.14
HMGCR-208ENST00000509431 STAG3Q9UJ98 1225 aa22.15■■□□□ 1.14
HMGCR-208ENST00000509431 AHDC1Q5TGY3 1603 aaPredicted RBP22.15■■□□□ 1.14
HMGCR-208ENST00000509431 SLC26A8Q96RN1 970 aa22.14■■□□□ 1.13
HMGCR-208ENST00000509431 ZRANB1Q9UGI0 708 aa22.13■■□□□ 1.13
HMGCR-208ENST00000509431 EFCAB6Q5THR3 1501 aa22.12■■□□□ 1.13
HMGCR-208ENST00000509431 RGS12O14924 1447 aa22.11■■□□□ 1.13
HMGCR-208ENST00000509431 NCOA3Q9Y6Q9 1424 aa22.11■■□□□ 1.13
HMGCR-208ENST00000509431 AFF2P51816 1311 aa22.1■■□□□ 1.13
HMGCR-208ENST00000509431 MAST1Q9Y2H9 1570 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms