RNA–Protein interactions for RNA: ENST00000509400.5

SIL1-212, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 4

Gene SIL1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-212ENST00000509400 PLEKHH2Q8IVE3 1493 aa17.36■□□□□ 0.37
SIL1-212ENST00000509400 CEP170BQ9Y4F5 1589 aaPredicted RBP17.36■□□□□ 0.37
SIL1-212ENST00000509400 PLA2R1Q13018 1463 aa17.35■□□□□ 0.37
SIL1-212ENST00000509400 UBAP1LF5GYI3 381 aa17.34■□□□□ 0.37
SIL1-212ENST00000509400 RSPH4AQ5TD94 716 aa17.34■□□□□ 0.37
SIL1-212ENST00000509400 GGT6Q6P531 493 aa17.34■□□□□ 0.37
SIL1-212ENST00000509400 ITGAEP38570 1179 aa17.32■□□□□ 0.36
SIL1-212ENST00000509400 PKD2Q13563 968 aa17.32■□□□□ 0.36
SIL1-212ENST00000509400 PTPN23Q9H3S7 1636 aa17.32■□□□□ 0.36
SIL1-212ENST00000509400 ABCC5O15440 1437 aa17.31■□□□□ 0.36
SIL1-212ENST00000509400 RRBP1Q9P2E9 1410 aaKnown RBP17.31■□□□□ 0.36
SIL1-212ENST00000509400 TSPY4P0CV99 314 aa17.31■□□□□ 0.36
SIL1-212ENST00000509400 TSPY10P0CW01 314 aa17.31■□□□□ 0.36
SIL1-212ENST00000509400 CHIC2Q9UKJ5 165 aa17.31■□□□□ 0.36
SIL1-212ENST00000509400 DNMT1P26358 1616 aaKnown RBP17.29■□□□□ 0.36
SIL1-212ENST00000509400 CCDC141Q6ZP82 1450 aa17.28■□□□□ 0.36
SIL1-212ENST00000509400 ADGBQ8N7X0 1667 aa17.28■□□□□ 0.36
SIL1-212ENST00000509400 PPP6R1Q9UPN7 881 aa17.27■□□□□ 0.36
SIL1-212ENST00000509400 A2ML1A8K2U0 1454 aa17.26■□□□□ 0.35
SIL1-212ENST00000509400 DAPK1P53355 1430 aa17.26■□□□□ 0.35
SIL1-212ENST00000509400 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.26■□□□□ 0.35
SIL1-212ENST00000509400 NEURL4Q96JN8 1562 aa17.25■□□□□ 0.35
SIL1-212ENST00000509400 FBXO31Q5XUX0 539 aaPredicted RBP17.24■□□□□ 0.35
SIL1-212ENST00000509400 ARHGEF5Q12774 1597 aa17.23■□□□□ 0.35
SIL1-212ENST00000509400 RRP7BPQ9NSQ0 103 aa17.23■□□□□ 0.35
SIL1-212ENST00000509400 HSPA1LP34931 641 aa17.22■□□□□ 0.35
SIL1-212ENST00000509400 RTEL1-TNFRSF6BF6WH68 1400 aa17.21■□□□□ 0.35
SIL1-212ENST00000509400 POLR1AO95602 1720 aaPredicted RBP17.21■□□□□ 0.35
SIL1-212ENST00000509400 DHX29Q7Z478 1369 aaKnown RBP17.21■□□□□ 0.35
SIL1-212ENST00000509400 TNRQ92752 1358 aa17.19■□□□□ 0.34
SIL1-212ENST00000509400 PIP4K2BP78356 416 aa17.19■□□□□ 0.34
SIL1-212ENST00000509400 MED1Q15648 1581 aaPredicted RBP17.19■□□□□ 0.34
SIL1-212ENST00000509400 SHANK2Q9UPX8 1470 aa17.18■□□□□ 0.34
SIL1-212ENST00000509400 PZPP20742 1482 aa17.18■□□□□ 0.34
SIL1-212ENST00000509400 ALKQ9UM73 1620 aa17.18■□□□□ 0.34
SIL1-212ENST00000509400 KIF3BO15066 747 aa17.17■□□□□ 0.34
SIL1-212ENST00000509400 SCAF1Q9H7N4 1312 aaKnown RBP17.17■□□□□ 0.34
SIL1-212ENST00000509400 VWDEQ8N2E2 1590 aa17.16■□□□□ 0.34
SIL1-212ENST00000509400 CPS1P31327 1500 aa17.16■□□□□ 0.34
SIL1-212ENST00000509400 KDM5DQ9BY66 1539 aa17.16■□□□□ 0.34
SIL1-212ENST00000509400 ANKRD30AQ9BXX3 1397 aa17.15■□□□□ 0.34
SIL1-212ENST00000509400 KIF15Q9NS87 1388 aa17.14■□□□□ 0.33
SIL1-212ENST00000509400 MAST1Q9Y2H9 1570 aa17.13■□□□□ 0.33
SIL1-212ENST00000509400 TOM1O60784 492 aa17.12■□□□□ 0.33
SIL1-212ENST00000509400 ANKLE2Q86XL3 938 aa17.11■□□□□ 0.33
SIL1-212ENST00000509400 WASHC2CQ9Y4E1 1318 aa17.11■□□□□ 0.33
SIL1-212ENST00000509400 ROCK1Q13464 1354 aa17.11■□□□□ 0.33
SIL1-212ENST00000509400 MED14O60244 1454 aa17.11■□□□□ 0.33
SIL1-212ENST00000509400 ADGRL2O95490 1459 aa17.11■□□□□ 0.33
SIL1-212ENST00000509400 STRCP1A6NGW2 1772 aa17.1■□□□□ 0.33
SIL1-212ENST00000509400 FAM135AQ9P2D6 1515 aa17.1■□□□□ 0.33
SIL1-212ENST00000509400 UGGT1Q9NYU2 1555 aa17.1■□□□□ 0.33
SIL1-212ENST00000509400 DEPDC5O75140 1603 aa17.1■□□□□ 0.33
SIL1-212ENST00000509400 TRIM26Q12899 539 aaPredicted RBP17.09■□□□□ 0.33
SIL1-212ENST00000509400 NPHP4O75161 1426 aaPredicted RBP17.09■□□□□ 0.33
SIL1-212ENST00000509400 NLRP1Q9C000 1473 aa17.08■□□□□ 0.32
SIL1-212ENST00000509400 THEMISQ8N1K5 641 aaPredicted RBP17.08■□□□□ 0.32
SIL1-212ENST00000509400 IQGAP1P46940 1657 aa17.06■□□□□ 0.32
SIL1-212ENST00000509400 CROCC2H7BZ55 1655 aa17.05■□□□□ 0.32
SIL1-212ENST00000509400 ANKRD50Q9ULJ7 1429 aa17.04■□□□□ 0.32
SIL1-212ENST00000509400 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.04■□□□□ 0.32
SIL1-212ENST00000509400 LRRC7Q96NW7 1537 aa17.04■□□□□ 0.32
SIL1-212ENST00000509400 DUOX2Q9NRD8 1548 aa17.04■□□□□ 0.32
SIL1-212ENST00000509400 NAIPQ13075 1403 aa17.04■□□□□ 0.32
SIL1-212ENST00000509400 RNF17Q9BXT8 1623 aaKnown RBP17.03■□□□□ 0.32
SIL1-212ENST00000509400 ABCC3O15438 1527 aa17.03■□□□□ 0.32
SIL1-212ENST00000509400 SENP3Q9H4L4 574 aaPredicted RBP17.03■□□□□ 0.32
SIL1-212ENST00000509400 MROH1Q8NDA8 1641 aa17.01■□□□□ 0.31
SIL1-212ENST00000509400 ZC3H13Q5T200 1668 aaKnown RBP17.01■□□□□ 0.31
SIL1-212ENST00000509400 ERVK-7P63135 1459 aa17■□□□□ 0.31
SIL1-212ENST00000509400 ERBINQ96RT1 1412 aa17■□□□□ 0.31
SIL1-212ENST00000509400 CFAP65Q6ZU64 1925 aaKnown RBP17■□□□□ 0.31
SIL1-212ENST00000509400 HFM1A2PYH4 1435 aa16.99■□□□□ 0.31
SIL1-212ENST00000509400 PHF23Q9BUL5 403 aaPredicted RBP16.98■□□□□ 0.31
SIL1-212ENST00000509400 UBR1Q8IWV7 1749 aa16.98■□□□□ 0.31
SIL1-212ENST00000509400 CEP152O94986 1710 aa16.97■□□□□ 0.31
SIL1-212ENST00000509400 SYNMO15061 1565 aa16.97■□□□□ 0.31
SIL1-212ENST00000509400 SETD5Q9C0A6 1442 aa16.96■□□□□ 0.31
SIL1-212ENST00000509400 XIRP1Q702N8 1843 aaKnown RBP16.96■□□□□ 0.3
SIL1-212ENST00000509400 LTKP29376 864 aa16.95■□□□□ 0.3
SIL1-212ENST00000509400 PCGF6Q9BYE7 350 aa16.95■□□□□ 0.3
SIL1-212ENST00000509400 RGS17Q9UGC6 210 aaPredicted RBP16.95■□□□□ 0.3
SIL1-212ENST00000509400 EIF2AK4Q9P2K8 1649 aaKnown RBP16.95■□□□□ 0.3
SIL1-212ENST00000509400 TRIM52Q96A61 297 aa16.94■□□□□ 0.3
SIL1-212ENST00000509400 SCAF11Q99590 1463 aaKnown RBP16.93■□□□□ 0.3
SIL1-212ENST00000509400 ARHGAP23Q9P227 1491 aa16.93■□□□□ 0.3
SIL1-212ENST00000509400 NUP155O75694 1391 aa16.92■□□□□ 0.3
SIL1-212ENST00000509400 RAB3GAP2Q9H2M9 1393 aa16.92■□□□□ 0.3
SIL1-212ENST00000509400 SLIT1O75093 1534 aa16.91■□□□□ 0.3
SIL1-212ENST00000509400 TXNDC2Q86VQ3 553 aa16.89■□□□□ 0.29
SIL1-212ENST00000509400 KANK1Q14678 1352 aa16.89■□□□□ 0.29
SIL1-212ENST00000509400 PIK3C2BO00750 1634 aa16.86■□□□□ 0.29
SIL1-212ENST00000509400 HRCP23327 699 aa16.86■□□□□ 0.29
SIL1-212ENST00000509400 ARHGAP31Q2M1Z3 1444 aa16.86■□□□□ 0.29
SIL1-212ENST00000509400 PRDM15P57071 1507 aaPredicted RBP16.86■□□□□ 0.29
SIL1-212ENST00000509400 GCC2Q8IWJ2 1684 aa16.83■□□□□ 0.28
SIL1-212ENST00000509400 MPHOSPH9Q99550 1183 aa16.83■□□□□ 0.28
SIL1-212ENST00000509400 SLC4A1APQ9BWU0 796 aaKnown RBP16.83■□□□□ 0.28
SIL1-212ENST00000509400 FAM135BQ49AJ0 1406 aa16.82■□□□□ 0.28
SIL1-212ENST00000509400 TMEM2Q9UHN6 1383 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms