RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 PPP4R3BQ5MIZ7 849 aa10.54□□□□□ -0.72
NFKB1-208ENST00000509165 PHF14O94880 888 aa10.53□□□□□ -0.72
NFKB1-208ENST00000509165 DDX12PQ92771 950 aa10.53□□□□□ -0.72
NFKB1-208ENST00000509165 STAC3Q96MF2 364 aa10.51□□□□□ -0.73
NFKB1-208ENST00000509165 ZDHHC16Q969W1 377 aa10.5□□□□□ -0.73
NFKB1-208ENST00000509165 ADAM33Q9BZ11 813 aa10.5□□□□□ -0.73
NFKB1-208ENST00000509165 TYW1BQ6NUM6 668 aa10.49□□□□□ -0.73
NFKB1-208ENST00000509165 EPAS1Q99814 870 aa10.49□□□□□ -0.73
NFKB1-208ENST00000509165 BCL2L12Q9HB09 334 aa10.49□□□□□ -0.73
NFKB1-208ENST00000509165 SEMA3EO15041 775 aa10.48□□□□□ -0.73
NFKB1-208ENST00000509165 MLLT3P42568 568 aaPredicted RBP10.48□□□□□ -0.73
NFKB1-208ENST00000509165 PRIM1P49642 420 aaKnown RBP10.48□□□□□ -0.73
NFKB1-208ENST00000509165 OSBPP22059 807 aa10.47□□□□□ -0.73
NFKB1-208ENST00000509165 FBXW7Q969H0 707 aa10.47□□□□□ -0.73
NFKB1-208ENST00000509165 GRXCR2A6NFK2 248 aa10.46□□□□□ -0.73
NFKB1-208ENST00000509165 NBR1Q14596 966 aa10.46□□□□□ -0.73
NFKB1-208ENST00000509165 A0A0G2JS52 829 aa10.45□□□□□ -0.74
NFKB1-208ENST00000509165 IFFO2Q5TF58 517 aa10.45□□□□□ -0.74
NFKB1-208ENST00000509165 TESPA1A2RU30 521 aaPredicted RBP10.44□□□□□ -0.74
NFKB1-208ENST00000509165 EN1Q05925 392 aaPredicted RBP10.44□□□□□ -0.74
NFKB1-208ENST00000509165 PTPREP23469 700 aa10.42□□□□□ -0.74
NFKB1-208ENST00000509165 KCNK17Q96T54 332 aa10.42□□□□□ -0.74
NFKB1-208ENST00000509165 C6orf132Q5T0Z8 1188 aa10.41□□□□□ -0.74
NFKB1-208ENST00000509165 Q6ZNB5 142 aa10.41□□□□□ -0.74
NFKB1-208ENST00000509165 RBM33Q96EV2 1170 aaKnown RBP10.41□□□□□ -0.74
NFKB1-208ENST00000509165 TSR1Q2NL82 804 aaKnown RBP10.39□□□□□ -0.75
NFKB1-208ENST00000509165 COL9A1P20849 921 aa10.38□□□□□ -0.75
NFKB1-208ENST00000509165 PPP1R3GB7ZBB8 358 aa10.37□□□□□ -0.75
NFKB1-208ENST00000509165 MAP3K7O43318 606 aa10.37□□□□□ -0.75
NFKB1-208ENST00000509165 ZBED2Q9BTP6 218 aa10.36□□□□□ -0.75
NFKB1-208ENST00000509165 SLC4A5Q9BY07 1137 aa10.36□□□□□ -0.75
NFKB1-208ENST00000509165 VPS9D1Q9Y2B5 631 aa10.36□□□□□ -0.75
NFKB1-208ENST00000509165 KCNH8Q96L42 1107 aa10.35□□□□□ -0.75
NFKB1-208ENST00000509165 CDHR5Q9HBB8 845 aa10.35□□□□□ -0.75
NFKB1-208ENST00000509165 THSD4Q6ZMP0 1018 aa10.34□□□□□ -0.75
NFKB1-208ENST00000509165 NPDC1Q9NQX5 325 aaPredicted RBP10.33□□□□□ -0.76
NFKB1-208ENST00000509165 SMYD5Q6GMV2 418 aa10.31□□□□□ -0.76
NFKB1-208ENST00000509165 PROX2Q3B8N5 592 aa10.3□□□□□ -0.76
NFKB1-208ENST00000509165 RBM26Q5T8P6 1007 aaKnown RBP10.3□□□□□ -0.76
NFKB1-208ENST00000509165 BHMG1C9JSJ3 638 aaPredicted RBP10.28□□□□□ -0.76
NFKB1-208ENST00000509165 CERKQ8TCT0 537 aa10.28□□□□□ -0.76
NFKB1-208ENST00000509165 WNT2BQ93097 391 aa10.28□□□□□ -0.76
NFKB1-208ENST00000509165 PTGDRQ13258 359 aa10.27□□□□□ -0.77
NFKB1-208ENST00000509165 GOLGA8CPA6NN73 597 aa10.26□□□□□ -0.77
NFKB1-208ENST00000509165 ONECUT3O60422 494 aaPredicted RBP10.26□□□□□ -0.77
NFKB1-208ENST00000509165 FAM198AQ9UFP1 575 aa10.26□□□□□ -0.77
NFKB1-208ENST00000509165 TRIM6-TRIM34B2RNG4 842 aa10.25□□□□□ -0.77
NFKB1-208ENST00000509165 GPR37O15354 613 aa10.25□□□□□ -0.77
NFKB1-208ENST00000509165 PRSS12P56730 875 aa10.25□□□□□ -0.77
NFKB1-208ENST00000509165 CDCA7LQ96GN5 454 aa10.25□□□□□ -0.77
NFKB1-208ENST00000509165 TSKSQ9UJT2 592 aa10.25□□□□□ -0.77
NFKB1-208ENST00000509165 NUTM2FA1L443 756 aa10.24□□□□□ -0.77
NFKB1-208ENST00000509165 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.24□□□□□ -0.77
NFKB1-208ENST00000509165 TTC13Q8NBP0 860 aa10.24□□□□□ -0.77
NFKB1-208ENST00000509165 RBM27Q9P2N5 1060 aaKnown RBP10.24□□□□□ -0.77
NFKB1-208ENST00000509165 RABGEF1Q9UJ41 708 aa10.24□□□□□ -0.77
NFKB1-208ENST00000509165 LCE2BO14633 110 aa10.22□□□□□ -0.77
NFKB1-208ENST00000509165 KIAA1468Q9P260 1216 aa10.22□□□□□ -0.77
NFKB1-208ENST00000509165 MRPL50Q8N5N7 158 aaKnown RBP10.21□□□□□ -0.77
NFKB1-208ENST00000509165 C3orf80F5H4A9 247 aa10.2□□□□□ -0.78
NFKB1-208ENST00000509165 FCHSD2O94868 740 aa10.2□□□□□ -0.78
NFKB1-208ENST00000509165 PADI6Q6TGC4 694 aa10.2□□□□□ -0.78
NFKB1-208ENST00000509165 TULP1O00294 542 aaPredicted RBP10.18□□□□□ -0.78
NFKB1-208ENST00000509165 LMOD2Q6P5Q4 547 aa10.18□□□□□ -0.78
NFKB1-208ENST00000509165 GPIHBP1Q8IV16 184 aa10.17□□□□□ -0.78
NFKB1-208ENST00000509165 NBPF3Q9H094 633 aa10.17□□□□□ -0.78
NFKB1-208ENST00000509165 ITGBL1O95965 494 aaPredicted RBP10.16□□□□□ -0.78
NFKB1-208ENST00000509165 HIC1Q14526 733 aa10.16□□□□□ -0.78
NFKB1-208ENST00000509165 PACS2Q86VP3 889 aa10.16□□□□□ -0.78
NFKB1-208ENST00000509165 BCANQ96GW7 911 aa10.16□□□□□ -0.78
NFKB1-208ENST00000509165 FECHP22830 423 aa10.15□□□□□ -0.78
NFKB1-208ENST00000509165 TRAF7Q6Q0C0 670 aa10.15□□□□□ -0.78
NFKB1-208ENST00000509165 LAPTM4BQ86VI4 370 aa10.15□□□□□ -0.78
NFKB1-208ENST00000509165 GNPATO15228 680 aa10.14□□□□□ -0.79
NFKB1-208ENST00000509165 TATDN2Q93075 761 aa10.14□□□□□ -0.79
NFKB1-208ENST00000509165 SEPT9Q9UHD8 586 aaPredicted RBP10.14□□□□□ -0.79
NFKB1-208ENST00000509165 NBPF26B4DH59 902 aa10.12□□□□□ -0.79
NFKB1-208ENST00000509165 SMAPO00193 183 aa10.12□□□□□ -0.79
NFKB1-208ENST00000509165 FAM98CQ17RN3 349 aaKnown RBP10.12□□□□□ -0.79
NFKB1-208ENST00000509165 NUDT18Q6ZVK8 323 aa10.11□□□□□ -0.79
NFKB1-208ENST00000509165 EYA1Q99502 592 aa10.11□□□□□ -0.79
NFKB1-208ENST00000509165 PNMA3Q9UL41 463 aa10.11□□□□□ -0.79
NFKB1-208ENST00000509165 ADGRG1Q9Y653 693 aa10.11□□□□□ -0.79
NFKB1-208ENST00000509165 GFRA3O60609 400 aa10.1□□□□□ -0.79
NFKB1-208ENST00000509165 LAPTM4AQ15012 233 aa10.1□□□□□ -0.79
NFKB1-208ENST00000509165 ZFRQ96KR1 1074 aaKnown RBP10.1□□□□□ -0.79
NFKB1-208ENST00000509165 FAM161AQ3B820 660 aa10.09□□□□□ -0.79
NFKB1-208ENST00000509165 ZC3H15Q8WU90 426 aaKnown RBP10.07□□□□□ -0.8
NFKB1-208ENST00000509165 BCAMP50895 628 aa10.06□□□□□ -0.8
NFKB1-208ENST00000509165 ZMYND10O75800 440 aa10.04□□□□□ -0.8
NFKB1-208ENST00000509165 ANKK1Q8NFD2 765 aa10.04□□□□□ -0.8
NFKB1-208ENST00000509165 PXYLP1Q8TE99 480 aa10.04□□□□□ -0.8
NFKB1-208ENST00000509165 SOWAHBA6NEL2 793 aa10.03□□□□□ -0.8
NFKB1-208ENST00000509165 KCNC4Q03721 635 aa10.03□□□□□ -0.8
NFKB1-208ENST00000509165 MAP2K5Q13163 448 aa10.03□□□□□ -0.8
NFKB1-208ENST00000509165 RBM46Q8TBY0 533 aaKnown RBP10.03□□□□□ -0.8
NFKB1-208ENST00000509165 OATP04181 439 aa10.02□□□□□ -0.81
NFKB1-208ENST00000509165 BARGINQ6ZT62 677 aa10.02□□□□□ -0.81
NFKB1-208ENST00000509165 METTL3Q86U44 580 aaKnown RBP10.02□□□□□ -0.81
NFKB1-208ENST00000509165 IRF6O14896 467 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms