RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 KIAA1211Q6ZU35 1233 aa12.9□□□□□ -0.34
PDGFRA-207ENST00000509092 ANTXR1Q9H6X2 564 aa12.9□□□□□ -0.34
PDGFRA-207ENST00000509092 MAGI1Q96QZ7 1491 aaPredicted RBP12.89□□□□□ -0.35
PDGFRA-207ENST00000509092 TERF1P54274 439 aa12.89□□□□□ -0.35
PDGFRA-207ENST00000509092 L3MBTL2Q969R5 705 aa12.89□□□□□ -0.35
PDGFRA-207ENST00000509092 ISY1Q9ULR0 285 aaKnown RBP12.89□□□□□ -0.35
PDGFRA-207ENST00000509092 BCORL1Q5H9F3 1711 aa12.89□□□□□ -0.35
PDGFRA-207ENST00000509092 PLIN1O60240 522 aa12.88□□□□□ -0.35
PDGFRA-207ENST00000509092 TRIM44Q96DX7 344 aaPredicted RBP12.88□□□□□ -0.35
PDGFRA-207ENST00000509092 SLKQ9H2G2 1235 aaPredicted RBP12.88□□□□□ -0.35
PDGFRA-207ENST00000509092 USP19O94966 1318 aa12.88□□□□□ -0.35
PDGFRA-207ENST00000509092 FYCO1Q9BQS8 1478 aa12.87□□□□□ -0.35
PDGFRA-207ENST00000509092 GRPEL1Q9HAV7 217 aa12.87□□□□□ -0.35
PDGFRA-207ENST00000509092 MCM4P33991 863 aa12.86□□□□□ -0.35
PDGFRA-207ENST00000509092 TEX14Q8IWB6 1497 aa12.85□□□□□ -0.35
PDGFRA-207ENST00000509092 RIPK4P57078 832 aa12.85□□□□□ -0.35
PDGFRA-207ENST00000509092 NBPF8Q3BBV2 869 aa12.85□□□□□ -0.35
PDGFRA-207ENST00000509092 SYNJ2O15056 1496 aa12.85□□□□□ -0.35
PDGFRA-207ENST00000509092 CNGB1Q14028 1251 aaPredicted RBP12.84□□□□□ -0.35
PDGFRA-207ENST00000509092 NCLP19338 710 aaKnown RBP12.84□□□□□ -0.35
PDGFRA-207ENST00000509092 UTP14CQ5TAP6 766 aaKnown RBP12.84□□□□□ -0.35
PDGFRA-207ENST00000509092 BBXQ8WY36 941 aaPredicted RBP12.84□□□□□ -0.35
PDGFRA-207ENST00000509092 GZF1Q9H116 711 aaPredicted RBP12.84□□□□□ -0.35
PDGFRA-207ENST00000509092 OFD1O75665 1012 aa12.83□□□□□ -0.35
PDGFRA-207ENST00000509092 ROCK2O75116 1388 aaKnown RBP12.83□□□□□ -0.36
PDGFRA-207ENST00000509092 KIF15Q9NS87 1388 aa12.83□□□□□ -0.36
PDGFRA-207ENST00000509092 MYBBP1AQ9BQG0 1328 aaKnown RBP12.83□□□□□ -0.36
PDGFRA-207ENST00000509092 FBLN2P98095 1184 aa12.83□□□□□ -0.36
PDGFRA-207ENST00000509092 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.83□□□□□ -0.36
PDGFRA-207ENST00000509092 MTERF4Q7Z6M4 381 aaKnown RBP12.83□□□□□ -0.36
PDGFRA-207ENST00000509092 CHMP7Q8WUX9 453 aaPredicted RBP12.83□□□□□ -0.36
PDGFRA-207ENST00000509092 GRIN2AQ12879 1464 aa12.83□□□□□ -0.36
PDGFRA-207ENST00000509092 RPRD2Q5VT52 1461 aaKnown RBP12.82□□□□□ -0.36
PDGFRA-207ENST00000509092 NLRP1Q9C000 1473 aa12.82□□□□□ -0.36
PDGFRA-207ENST00000509092 TRAK2O60296 914 aa12.82□□□□□ -0.36
PDGFRA-207ENST00000509092 GTF2E1P29083 439 aaPredicted RBP12.82□□□□□ -0.36
PDGFRA-207ENST00000509092 CTTNBP2Q8WZ74 1663 aa12.8□□□□□ -0.36
PDGFRA-207ENST00000509092 CDCA7LQ96GN5 454 aa12.8□□□□□ -0.36
PDGFRA-207ENST00000509092 ZHX1Q9UKY1 873 aaPredicted RBP12.8□□□□□ -0.36
PDGFRA-207ENST00000509092 CHD1O14646 1710 aa12.8□□□□□ -0.36
PDGFRA-207ENST00000509092 DMTNQ08495 405 aa12.8□□□□□ -0.36
PDGFRA-207ENST00000509092 NAP1L2Q9ULW6 460 aaPredicted RBP12.8□□□□□ -0.36
PDGFRA-207ENST00000509092 CANXP27824 592 aaKnown RBP12.79□□□□□ -0.36
PDGFRA-207ENST00000509092 RALBP1Q15311 655 aa12.79□□□□□ -0.36
PDGFRA-207ENST00000509092 TAF7LQ5H9L4 462 aa12.79□□□□□ -0.36
PDGFRA-207ENST00000509092 C20orf194Q5TEA3 1177 aa12.79□□□□□ -0.36
PDGFRA-207ENST00000509092 CASKIN1Q8WXD9 1431 aa12.79□□□□□ -0.36
PDGFRA-207ENST00000509092 PLEKHH2Q8IVE3 1493 aa12.79□□□□□ -0.36
PDGFRA-207ENST00000509092 ZMYM4Q5VZL5 1548 aa12.79□□□□□ -0.36
PDGFRA-207ENST00000509092 STAC3Q96MF2 364 aa12.79□□□□□ -0.36
PDGFRA-207ENST00000509092 FAM13BQ9NYF5 915 aa12.79□□□□□ -0.36
PDGFRA-207ENST00000509092 INSRP06213 1382 aa12.78□□□□□ -0.36
PDGFRA-207ENST00000509092 E9PCH4 1651 aa12.78□□□□□ -0.36
PDGFRA-207ENST00000509092 KDM5CP41229 1560 aa12.78□□□□□ -0.36
PDGFRA-207ENST00000509092 ZSCAN30Q86W11 494 aa12.77□□□□□ -0.37
PDGFRA-207ENST00000509092 KDM6BO15054 1643 aa12.76□□□□□ -0.37
PDGFRA-207ENST00000509092 CEP170Q5SW79 1584 aa12.76□□□□□ -0.37
PDGFRA-207ENST00000509092 DDX11L8A8MPP1 907 aa12.76□□□□□ -0.37
PDGFRA-207ENST00000509092 MPHOSPH9Q99550 1183 aa12.76□□□□□ -0.37
PDGFRA-207ENST00000509092 USP47Q96K76 1375 aa12.75□□□□□ -0.37
PDGFRA-207ENST00000509092 BLMP54132 1417 aaPredicted RBP12.75□□□□□ -0.37
PDGFRA-207ENST00000509092 CCDC173Q0VFZ6 552 aa12.75□□□□□ -0.37
PDGFRA-207ENST00000509092 POLR3GLQ9BT43 218 aa12.75□□□□□ -0.37
PDGFRA-207ENST00000509092 TBC1D2Q9BYX2 928 aa12.75□□□□□ -0.37
PDGFRA-207ENST00000509092 KIF14Q15058 1648 aa12.75□□□□□ -0.37
PDGFRA-207ENST00000509092 IPO4Q8TEX9 1081 aaKnown RBP12.74□□□□□ -0.37
PDGFRA-207ENST00000509092 CHMP5Q9NZZ3 219 aa12.74□□□□□ -0.37
PDGFRA-207ENST00000509092 ANKRD30BQ9BXX2 1392 aa12.74□□□□□ -0.37
PDGFRA-207ENST00000509092 NUP160Q12769 1436 aa12.74□□□□□ -0.37
PDGFRA-207ENST00000509092 SEC24BO95487 1268 aa12.73□□□□□ -0.37
PDGFRA-207ENST00000509092 PPP1R9BQ96SB3 815 aa12.73□□□□□ -0.37
PDGFRA-207ENST00000509092 ATP1B4Q9UN42 357 aaPredicted RBP12.73□□□□□ -0.37
PDGFRA-207ENST00000509092 EFCAB5A4FU69 1503 aa12.73□□□□□ -0.37
PDGFRA-207ENST00000509092 PRDM10Q9NQV6 1147 aa12.73□□□□□ -0.37
PDGFRA-207ENST00000509092 SUPT6HQ7KZ85 1726 aaKnown RBP12.73□□□□□ -0.37
PDGFRA-207ENST00000509092 DYNC1I1O14576 645 aa12.72□□□□□ -0.37
PDGFRA-207ENST00000509092 IQGAP2Q13576 1575 aa12.72□□□□□ -0.37
PDGFRA-207ENST00000509092 MBD5Q9P267 1494 aa12.72□□□□□ -0.37
PDGFRA-207ENST00000509092 MAPK8IP3Q9UPT6 1336 aa12.72□□□□□ -0.37
PDGFRA-207ENST00000509092 MSNP26038 577 aaKnown RBP12.72□□□□□ -0.37
PDGFRA-207ENST00000509092 TNNT2P45379 298 aaPredicted RBP12.72□□□□□ -0.37
PDGFRA-207ENST00000509092 NLRP13Q86W25 1043 aa12.72□□□□□ -0.37
PDGFRA-207ENST00000509092 KIAA0586Q9BVV6 1533 aa12.72□□□□□ -0.37
PDGFRA-207ENST00000509092 CHMP4BQ9H444 224 aaKnown RBP12.71□□□□□ -0.37
PDGFRA-207ENST00000509092 R3HCC1Q9Y3T6 440 aaKnown RBP12.71□□□□□ -0.37
PDGFRA-207ENST00000509092 EIF3AQ14152 1382 aaKnown RBP12.71□□□□□ -0.37
PDGFRA-207ENST00000509092 UQCRHLA0A096LP55 91 aa12.71□□□□□ -0.38
PDGFRA-207ENST00000509092 UQCRHP07919 91 aa12.71□□□□□ -0.38
PDGFRA-207ENST00000509092 ZSCAN20P17040 1043 aaPredicted RBP12.71□□□□□ -0.38
PDGFRA-207ENST00000509092 PPP4R3BQ5MIZ7 849 aa12.71□□□□□ -0.38
PDGFRA-207ENST00000509092 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.71□□□□□ -0.38
PDGFRA-207ENST00000509092 TBC1D32Q96NH3 1257 aa12.71□□□□□ -0.38
PDGFRA-207ENST00000509092 UPF2Q9HAU5 1272 aaKnown RBP12.71□□□□□ -0.38
PDGFRA-207ENST00000509092 CCDC94Q9BW85 323 aaPredicted RBP12.7□□□□□ -0.38
PDGFRA-207ENST00000509092 CCDC144AA2RUR9 1427 aa12.7□□□□□ -0.38
PDGFRA-207ENST00000509092 MTUS2Q5JR59 1369 aa12.7□□□□□ -0.38
PDGFRA-207ENST00000509092 KIF20AO95235 890 aa12.7□□□□□ -0.38
PDGFRA-207ENST00000509092 RRP7BPQ9NSQ0 103 aa12.7□□□□□ -0.38
PDGFRA-207ENST00000509092 FHOD3Q2V2M9 1422 aa12.7□□□□□ -0.38
PDGFRA-207ENST00000509092 GAS2L3Q86XJ1 694 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms