RNA–Protein interactions for RNA: ENST00000508726.5

CDK7-206, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-206ENST00000508726 MAP2K5Q13163 448 aa12.53□□□□□ -0.4
CDK7-206ENST00000508726 MAMSTRQ6ZN01 415 aa12.53□□□□□ -0.4
CDK7-206ENST00000508726 MINK1Q8N4C8 1332 aaPredicted RBP12.53□□□□□ -0.4
CDK7-206ENST00000508726 TRIM66O15016 1216 aa12.52□□□□□ -0.41
CDK7-206ENST00000508726 MAP3K7O43318 606 aa12.52□□□□□ -0.41
CDK7-206ENST00000508726 PTGDRQ13258 359 aa12.52□□□□□ -0.41
CDK7-206ENST00000508726 RIMBP2O15034 1052 aa12.51□□□□□ -0.41
CDK7-206ENST00000508726 PCDHGA10Q9Y5H3 936 aa12.51□□□□□ -0.41
CDK7-206ENST00000508726 KDM4FA0A1W2PPD8 638 aa12.5□□□□□ -0.41
CDK7-206ENST00000508726 TYW1BQ6NUM6 668 aa12.5□□□□□ -0.41
CDK7-206ENST00000508726 CCDC102AQ96A19 550 aa12.5□□□□□ -0.41
CDK7-206ENST00000508726 RBM33Q96EV2 1170 aaKnown RBP12.5□□□□□ -0.41
CDK7-206ENST00000508726 JPH4Q96JJ6 628 aa12.5□□□□□ -0.41
CDK7-206ENST00000508726 HOXB3P14651 431 aaPredicted RBP12.49□□□□□ -0.41
CDK7-206ENST00000508726 PDE4DQ08499 809 aa12.49□□□□□ -0.41
CDK7-206ENST00000508726 IRF6O14896 467 aa12.48□□□□□ -0.41
CDK7-206ENST00000508726 FBXW7Q969H0 707 aa12.48□□□□□ -0.41
CDK7-206ENST00000508726 CDHR5Q9HBB8 845 aa12.48□□□□□ -0.41
CDK7-206ENST00000508726 FECHP22830 423 aa12.47□□□□□ -0.41
CDK7-206ENST00000508726 GPBP1L1Q9HC44 474 aaPredicted RBP12.47□□□□□ -0.41
CDK7-206ENST00000508726 GTF3C3Q9Y5Q9 886 aa12.47□□□□□ -0.41
CDK7-206ENST00000508726 NUDT7P0C024 238 aa12.46□□□□□ -0.41
CDK7-206ENST00000508726 ARSIQ5FYB1 569 aa12.46□□□□□ -0.41
CDK7-206ENST00000508726 ZSWIM6Q9HCJ5 1215 aa12.46□□□□□ -0.41
CDK7-206ENST00000508726 FOSBP53539 338 aa12.44□□□□□ -0.42
CDK7-206ENST00000508726 TSR1Q2NL82 804 aaKnown RBP12.44□□□□□ -0.42
CDK7-206ENST00000508726 ZNF710Q8N1W2 664 aa12.44□□□□□ -0.42
CDK7-206ENST00000508726 KHSRPQ92945 711 aaKnown RBP eCLIP12.44□□□□□ -0.421e-7■□□□□ 11.1
CDK7-206ENST00000508726 ZNF454Q8N9F8 522 aa12.43□□□□□ -0.42
CDK7-206ENST00000508726 KDM4CQ9H3R0 1056 aa12.43□□□□□ -0.42
CDK7-206ENST00000508726 NPDC1Q9NQX5 325 aaPredicted RBP12.42□□□□□ -0.42
CDK7-206ENST00000508726 TOP2AP11388 1531 aaKnown RBP12.42□□□□□ -0.42
CDK7-206ENST00000508726 GPR153Q6NV75 609 aa12.41□□□□□ -0.42
CDK7-206ENST00000508726 WIZO95785 1651 aa12.41□□□□□ -0.42
CDK7-206ENST00000508726 ZDHHC16Q969W1 377 aa12.4□□□□□ -0.42
CDK7-206ENST00000508726 AMHR2Q16671 573 aa12.39□□□□□ -0.43
CDK7-206ENST00000508726 DAXXQ9UER7 740 aaPredicted RBP12.39□□□□□ -0.43
CDK7-206ENST00000508726 CADPSQ9ULU8 1353 aa12.39□□□□□ -0.43
CDK7-206ENST00000508726 PDS5BQ9NTI5 1447 aa12.37□□□□□ -0.43
CDK7-206ENST00000508726 SNPHO15079 494 aa12.36□□□□□ -0.43
CDK7-206ENST00000508726 C6orf132Q5T0Z8 1188 aa12.36□□□□□ -0.43
CDK7-206ENST00000508726 TTLL12Q14166 644 aaPredicted RBP12.35□□□□□ -0.43
CDK7-206ENST00000508726 PARP9Q8IXQ6 854 aa12.35□□□□□ -0.43
CDK7-206ENST00000508726 CERKQ8TCT0 537 aa12.35□□□□□ -0.43
CDK7-206ENST00000508726 ERCC6Q03468 1493 aa12.34□□□□□ -0.43
CDK7-206ENST00000508726 IL27Q8NEV9 243 aa12.34□□□□□ -0.43
CDK7-206ENST00000508726 ADAM33Q9BZ11 813 aa12.34□□□□□ -0.43
CDK7-206ENST00000508726 LHX6Q9UPM6 363 aa12.34□□□□□ -0.43
CDK7-206ENST00000508726 PPP4R3BQ5MIZ7 849 aa12.32□□□□□ -0.44
CDK7-206ENST00000508726 LAMC3Q9Y6N6 1575 aa12.31□□□□□ -0.44
CDK7-206ENST00000508726 PSDA5PKW4 1024 aaPredicted RBP12.31□□□□□ -0.44
CDK7-206ENST00000508726 PADI6Q6TGC4 694 aa12.3□□□□□ -0.44
CDK7-206ENST00000508726 RBM27Q9P2N5 1060 aaKnown RBP12.29□□□□□ -0.44
CDK7-206ENST00000508726 HOXB1P14653 301 aaPredicted RBP12.28□□□□□ -0.44
CDK7-206ENST00000508726 FAM117AQ9C073 453 aa12.28□□□□□ -0.44
CDK7-206ENST00000508726 CCDC88BA6NC98 1476 aa12.27□□□□□ -0.44
CDK7-206ENST00000508726 GIGYF2Q6Y7W6 1299 aaKnown RBP12.27□□□□□ -0.45
CDK7-206ENST00000508726 DDRGK1Q96HY6 314 aa12.27□□□□□ -0.45
CDK7-206ENST00000508726 CFTRP13569 1480 aa12.27□□□□□ -0.45
CDK7-206ENST00000508726 TIMELESSQ9UNS1 1208 aa12.26□□□□□ -0.45
CDK7-206ENST00000508726 FAM161AQ3B820 660 aa12.25□□□□□ -0.45
CDK7-206ENST00000508726 ERICH6Q7L0X2 663 aa12.25□□□□□ -0.45
CDK7-206ENST00000508726 OTUD5Q96G74 571 aa12.25□□□□□ -0.45
CDK7-206ENST00000508726 BCL2L12Q9HB09 334 aa12.25□□□□□ -0.45
CDK7-206ENST00000508726 OATP04181 439 aa12.24□□□□□ -0.45
CDK7-206ENST00000508726 CLCN1P35523 988 aa12.24□□□□□ -0.45
CDK7-206ENST00000508726 PRSS12P56730 875 aa12.24□□□□□ -0.45
CDK7-206ENST00000508726 MDM2Q00987 491 aaPredicted RBP12.23□□□□□ -0.45
CDK7-206ENST00000508726 METTL3Q86U44 580 aaKnown RBP12.23□□□□□ -0.45
CDK7-206ENST00000508726 TTC13Q8NBP0 860 aa12.23□□□□□ -0.45
CDK7-206ENST00000508726 CDCA7LQ96GN5 454 aa12.23□□□□□ -0.45
CDK7-206ENST00000508726 PHOX2BQ99453 314 aa12.23□□□□□ -0.45
CDK7-206ENST00000508726 ADGRG1Q9Y653 693 aa12.23□□□□□ -0.45
CDK7-206ENST00000508726 PTPREP23469 700 aa12.22□□□□□ -0.45
CDK7-206ENST00000508726 GPCPD1Q9NPB8 672 aa12.22□□□□□ -0.45
CDK7-206ENST00000508726 REPIN1Q9BWE0 567 aaKnown RBP12.21□□□□□ -0.45
CDK7-206ENST00000508726 NESP48681 1621 aa12.2□□□□□ -0.46
CDK7-206ENST00000508726 PLEKHG3A1L390 1219 aa12.2□□□□□ -0.46
CDK7-206ENST00000508726 PPP1R3GB7ZBB8 358 aa12.2□□□□□ -0.46
CDK7-206ENST00000508726 COL9A1P20849 921 aa12.2□□□□□ -0.46
CDK7-206ENST00000508726 PXYLP1Q8TE99 480 aa12.2□□□□□ -0.46
CDK7-206ENST00000508726 MS4A1P11836 297 aa12.19□□□□□ -0.46
CDK7-206ENST00000508726 TMUB1Q9BVT8 246 aa12.19□□□□□ -0.46
CDK7-206ENST00000508726 FANCD2Q9BXW9 1451 aa12.18□□□□□ -0.46
CDK7-206ENST00000508726 CEP164Q9UPV0 1460 aa12.18□□□□□ -0.46
CDK7-206ENST00000508726 LHX8Q68G74 356 aa12.17□□□□□ -0.46
CDK7-206ENST00000508726 C14orf37Q86TY3 774 aa12.17□□□□□ -0.46
CDK7-206ENST00000508726 RBM46Q8TBY0 533 aaKnown RBP12.17□□□□□ -0.46
CDK7-206ENST00000508726 NLRP7Q8WX94 980 aa12.16□□□□□ -0.46
CDK7-206ENST00000508726 KCNH8Q96L42 1107 aa12.15□□□□□ -0.46
CDK7-206ENST00000508726 CUX2O14529 1486 aa12.14□□□□□ -0.47
CDK7-206ENST00000508726 KCNK17Q96T54 332 aa12.14□□□□□ -0.47
CDK7-206ENST00000508726 FAM198AQ9UFP1 575 aa12.14□□□□□ -0.47
CDK7-206ENST00000508726 ABCC8Q09428 1581 aa12.13□□□□□ -0.47
CDK7-206ENST00000508726 SSTR3P32745 418 aaPredicted RBP12.13□□□□□ -0.47
CDK7-206ENST00000508726 TSKSQ9UJT2 592 aa12.13□□□□□ -0.47
CDK7-206ENST00000508726 MRC2Q9UBG0 1479 aa12.13□□□□□ -0.47
CDK7-206ENST00000508726 FAM217BQ9NTX9 383 aaPredicted RBP12.12□□□□□ -0.47
CDK7-206ENST00000508726 TRIM6-TRIM34B2RNG4 842 aa12.11□□□□□ -0.47
CDK7-206ENST00000508726 NBPF26B4DH59 902 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms