RNA–Protein interactions for RNA: ENST00000508514.5

SKP2-204, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3 BASIC

Gene SKP2, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-204ENST00000508514 TSPY10P0CW01 314 aa28.4■■■□□ 2.14
SKP2-204ENST00000508514 PLA2R1Q13018 1463 aa28.37■■■□□ 2.13
SKP2-204ENST00000508514 TCOF1Q13428 1488 aaKnown RBP28.36■■■□□ 2.13
SKP2-204ENST00000508514 WASHC2CQ9Y4E1 1318 aa28.35■■■□□ 2.13
SKP2-204ENST00000508514 MYOM3Q5VTT5 1437 aa28.35■■■□□ 2.13
SKP2-204ENST00000508514 KDM5DQ9BY66 1539 aa28.34■■■□□ 2.13
SKP2-204ENST00000508514 MIA2Q96PC5 1412 aa28.34■■■□□ 2.13
SKP2-204ENST00000508514 PKD2Q13563 968 aa28.33■■■□□ 2.13
SKP2-204ENST00000508514 A2ML1A8K2U0 1454 aa28.33■■■□□ 2.13
SKP2-204ENST00000508514 PZPP20742 1482 aa28.33■■■□□ 2.13
SKP2-204ENST00000508514 MAST1Q9Y2H9 1570 aa28.32■■■□□ 2.12
SKP2-204ENST00000508514 ZNF335Q9H4Z2 1342 aaPredicted RBP28.31■■■□□ 2.12
SKP2-204ENST00000508514 TNRQ92752 1358 aa28.31■■■□□ 2.12
SKP2-204ENST00000508514 DNMT1P26358 1616 aaKnown RBP28.31■■■□□ 2.12
SKP2-204ENST00000508514 FAM135AQ9P2D6 1515 aa28.3■■■□□ 2.12
SKP2-204ENST00000508514 RNF17Q9BXT8 1623 aaKnown RBP28.23■■■□□ 2.11
SKP2-204ENST00000508514 IQSEC2Q5JU85 1478 aa28.22■■■□□ 2.11
SKP2-204ENST00000508514 ABCC3O15438 1527 aa28.21■■■□□ 2.11
SKP2-204ENST00000508514 ABCC5O15440 1437 aa28.2■■■□□ 2.11
SKP2-204ENST00000508514 MROH1Q8NDA8 1641 aa28.2■■■□□ 2.1
SKP2-204ENST00000508514 NEURL4Q96JN8 1562 aa28.17■■■□□ 2.1
SKP2-204ENST00000508514 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.17■■■□□ 2.1
SKP2-204ENST00000508514 EIF2AK4Q9P2K8 1649 aaKnown RBP28.16■■■□□ 2.1
SKP2-204ENST00000508514 NLRP1Q9C000 1473 aa28.15■■■□□ 2.1
SKP2-204ENST00000508514 DUOX2Q9NRD8 1548 aa28.14■■■□□ 2.1
SKP2-204ENST00000508514 APLP2Q06481 763 aa28.14■■■□□ 2.1
SKP2-204ENST00000508514 PTPN23Q9H3S7 1636 aa28.14■■■□□ 2.09
SKP2-204ENST00000508514 RRP7BPQ9NSQ0 103 aa28.13■■■□□ 2.09
SKP2-204ENST00000508514 THEMISQ8N1K5 641 aaPredicted RBP28.12■■■□□ 2.09
SKP2-204ENST00000508514 KIF15Q9NS87 1388 aa28.11■■■□□ 2.09
SKP2-204ENST00000508514 SPATA31D1Q6ZQQ2 1576 aa28.11■■■□□ 2.09
SKP2-204ENST00000508514 SHANK2Q9UPX8 1470 aa28.11■■■□□ 2.09
SKP2-204ENST00000508514 UGGT1Q9NYU2 1555 aa28.11■■■□□ 2.09
SKP2-204ENST00000508514 FGD6Q6ZV73 1430 aa28.1■■■□□ 2.09
SKP2-204ENST00000508514 ANKLE2Q86XL3 938 aa28.1■■■□□ 2.09
SKP2-204ENST00000508514 ZC3H13Q5T200 1668 aaKnown RBP28.1■■■□□ 2.09
SKP2-204ENST00000508514 DAPK1P53355 1430 aa28.09■■■□□ 2.09
SKP2-204ENST00000508514 ERVK-7P63135 1459 aa28.09■■■□□ 2.09
SKP2-204ENST00000508514 CROCC2H7BZ55 1655 aa28.08■■■□□ 2.09
SKP2-204ENST00000508514 POLR1AO95602 1720 aaPredicted RBP28.08■■■□□ 2.09
SKP2-204ENST00000508514 CEP152O94986 1710 aa28.06■■■□□ 2.08
SKP2-204ENST00000508514 UBAP1LF5GYI3 381 aa28.05■■■□□ 2.08
SKP2-204ENST00000508514 ERBINQ96RT1 1412 aa28.05■■■□□ 2.08
SKP2-204ENST00000508514 MED14O60244 1454 aa28.04■■■□□ 2.08
SKP2-204ENST00000508514 PRDM15P57071 1507 aaPredicted RBP28.02■■■□□ 2.08
SKP2-204ENST00000508514 CHIC2Q9UKJ5 165 aa28.02■■■□□ 2.08
SKP2-204ENST00000508514 NPHP4O75161 1426 aaPredicted RBP28.01■■■□□ 2.08
SKP2-204ENST00000508514 ARHGAP31Q2M1Z3 1444 aa28.01■■■□□ 2.07
SKP2-204ENST00000508514 DEPDC5O75140 1603 aa28■■■□□ 2.07
SKP2-204ENST00000508514 VWDEQ8N2E2 1590 aa28■■■□□ 2.07
SKP2-204ENST00000508514 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.99■■■□□ 2.071e-6■■□□□ 12.2
SKP2-204ENST00000508514 CFAP65Q6ZU64 1925 aaKnown RBP27.98■■■□□ 2.07
SKP2-204ENST00000508514 DISP3Q9P2K9 1392 aa27.98■■■□□ 2.07
SKP2-204ENST00000508514 ILDR2Q71H61 639 aa27.96■■■□□ 2.07
SKP2-204ENST00000508514 CPS1P31327 1500 aa27.96■■■□□ 2.07
SKP2-204ENST00000508514 ANKRD30AQ9BXX3 1397 aa27.95■■■□□ 2.06
SKP2-204ENST00000508514 UBR1Q8IWV7 1749 aa27.93■■■□□ 2.06
SKP2-204ENST00000508514 LTKP29376 864 aa27.92■■■□□ 2.06
SKP2-204ENST00000508514 IQGAP1P46940 1657 aa27.91■■■□□ 2.06
SKP2-204ENST00000508514 ARHGAP23Q9P227 1491 aa27.89■■■□□ 2.05
SKP2-204ENST00000508514 ADGRL2O95490 1459 aa27.88■■■□□ 2.05
SKP2-204ENST00000508514 LMTK2Q8IWU2 1503 aa27.87■■■□□ 2.05
SKP2-204ENST00000508514 FAM50AQ14320 339 aaKnown RBP27.87■■■□□ 2.05
SKP2-204ENST00000508514 STRCP1A6NGW2 1772 aa27.86■■■□□ 2.05
SKP2-204ENST00000508514 SLIT1O75093 1534 aa27.86■■■□□ 2.05
SKP2-204ENST00000508514 KANK1Q14678 1352 aa27.86■■■□□ 2.05
SKP2-204ENST00000508514 SCAF11Q99590 1463 aaKnown RBP27.85■■■□□ 2.05
SKP2-204ENST00000508514 TXNDC2Q86VQ3 553 aa27.85■■■□□ 2.05
SKP2-204ENST00000508514 ALKQ9UM73 1620 aa27.85■■■□□ 2.05
SKP2-204ENST00000508514 IDI1Q13907 227 aa27.84■■■□□ 2.05
SKP2-204ENST00000508514 TOM1O60784 492 aa27.83■■■□□ 2.05
SKP2-204ENST00000508514 PIP4K2BP78356 416 aa27.83■■■□□ 2.05
SKP2-204ENST00000508514 PIK3C2BO00750 1634 aa27.81■■■□□ 2.04
SKP2-204ENST00000508514 HSPA1LP34931 641 aa27.81■■■□□ 2.04
SKP2-204ENST00000508514 LRRC7Q96NW7 1537 aa27.81■■■□□ 2.04
SKP2-204ENST00000508514 NOS1P29475 1434 aa27.79■■■□□ 2.04
SKP2-204ENST00000508514 TMEM2Q9UHN6 1383 aa27.79■■■□□ 2.04
SKP2-204ENST00000508514 SYNMO15061 1565 aa27.78■■■□□ 2.04
SKP2-204ENST00000508514 SCAF1Q9H7N4 1312 aaKnown RBP27.78■■■□□ 2.04
SKP2-204ENST00000508514 ANKRD50Q9ULJ7 1429 aa27.77■■■□□ 2.04
SKP2-204ENST00000508514 EFCAB6Q5THR3 1501 aa27.76■■■□□ 2.03
SKP2-204ENST00000508514 EID1Q9Y6B2 187 aa27.74■■■□□ 2.03
SKP2-204ENST00000508514 STAG3Q9UJ98 1225 aa27.72■■■□□ 2.03
SKP2-204ENST00000508514 KDM5AP29375 1690 aaKnown RBP27.69■■■□□ 2.02
SKP2-204ENST00000508514 SOCS7O14512 581 aa27.67■■■□□ 2.02
SKP2-204ENST00000508514 SLC52A1Q9NWF4 448 aa27.67■■■□□ 2.02
SKP2-204ENST00000508514 TET3O43151 1660 aa27.65■■■□□ 2.02
SKP2-204ENST00000508514 PPARGC1BQ86YN6 1023 aaKnown RBP27.65■■■□□ 2.02
SKP2-204ENST00000508514 RPRD2Q5VT52 1461 aaKnown RBP27.64■■■□□ 2.02
SKP2-204ENST00000508514 ROCK1Q13464 1354 aa27.63■■■□□ 2.01
SKP2-204ENST00000508514 ADGRB3O60242 1522 aa27.63■■■□□ 2.01
SKP2-204ENST00000508514 SLC26A8Q96RN1 970 aa27.63■■■□□ 2.01
SKP2-204ENST00000508514 XIRP1Q702N8 1843 aaKnown RBP27.61■■■□□ 2.01
SKP2-204ENST00000508514 UNC13BO14795 1591 aa27.6■■■□□ 2.01
SKP2-204ENST00000508514 KCNA6P17658 529 aa27.58■■■□□ 2.01
SKP2-204ENST00000508514 ZFYVE9O95405 1425 aa27.57■■■□□ 2
SKP2-204ENST00000508514 MED1Q15648 1581 aaPredicted RBP27.56■■■□□ 2
SKP2-204ENST00000508514 SENP3Q9H4L4 574 aaPredicted RBP27.56■■■□□ 2
SKP2-204ENST00000508514 ITGAEP38570 1179 aa27.55■■■□□ 2
SKP2-204ENST00000508514 RBM33Q96EV2 1170 aaKnown RBP27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms