RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 TSR1Q2NL82 804 aaKnown RBP13.67□□□□□ -0.22
COL6A4P1-204ENST00000508169 TIMELESSQ9UNS1 1208 aa13.67□□□□□ -0.22
COL6A4P1-204ENST00000508169 NUDT7P0C024 238 aa13.66□□□□□ -0.22
COL6A4P1-204ENST00000508169 ARSIQ5FYB1 569 aa13.66□□□□□ -0.22
COL6A4P1-204ENST00000508169 ZSWIM6Q9HCJ5 1215 aa13.66□□□□□ -0.22
COL6A4P1-204ENST00000508169 IL27Q8NEV9 243 aa13.65□□□□□ -0.22
COL6A4P1-204ENST00000508169 ERICH6Q7L0X2 663 aa13.64□□□□□ -0.23
COL6A4P1-204ENST00000508169 ZNF454Q8N9F8 522 aa13.64□□□□□ -0.23
COL6A4P1-204ENST00000508169 KHSRPQ92945 711 aaKnown RBP eCLIP13.64□□□□□ -0.23
COL6A4P1-204ENST00000508169 PARP9Q8IXQ6 854 aa13.62□□□□□ -0.23
COL6A4P1-204ENST00000508169 ZNF710Q8N1W2 664 aa13.62□□□□□ -0.23
COL6A4P1-204ENST00000508169 ZDHHC16Q969W1 377 aa13.62□□□□□ -0.23
COL6A4P1-204ENST00000508169 GPR153Q6NV75 609 aa13.61□□□□□ -0.23
COL6A4P1-204ENST00000508169 TTLL12Q14166 644 aaPredicted RBP13.6□□□□□ -0.23
COL6A4P1-204ENST00000508169 C6orf132Q5T0Z8 1188 aa13.59□□□□□ -0.23
COL6A4P1-204ENST00000508169 CERKQ8TCT0 537 aa13.58□□□□□ -0.24
COL6A4P1-204ENST00000508169 FAM117AQ9C073 453 aa13.57□□□□□ -0.24
COL6A4P1-204ENST00000508169 DDRGK1Q96HY6 314 aa13.55□□□□□ -0.24
COL6A4P1-204ENST00000508169 ADAM33Q9BZ11 813 aa13.55□□□□□ -0.24
COL6A4P1-204ENST00000508169 LHX6Q9UPM6 363 aa13.54□□□□□ -0.24
COL6A4P1-204ENST00000508169 C14orf37Q86TY3 774 aa13.53□□□□□ -0.24
COL6A4P1-204ENST00000508169 SNPHO15079 494 aa13.52□□□□□ -0.25
COL6A4P1-204ENST00000508169 PADI6Q6TGC4 694 aa13.52□□□□□ -0.25
COL6A4P1-204ENST00000508169 GIGYF2Q6Y7W6 1299 aaKnown RBP13.52□□□□□ -0.25
COL6A4P1-204ENST00000508169 PPP4R3BQ5MIZ7 849 aa13.51□□□□□ -0.25
COL6A4P1-204ENST00000508169 RBM27Q9P2N5 1060 aaKnown RBP13.51□□□□□ -0.25
COL6A4P1-204ENST00000508169 PLEKHG3A1L390 1219 aa13.5□□□□□ -0.25
COL6A4P1-204ENST00000508169 PSDA5PKW4 1024 aaPredicted RBP13.5□□□□□ -0.25
COL6A4P1-204ENST00000508169 CLCN1P35523 988 aa13.49□□□□□ -0.25
COL6A4P1-204ENST00000508169 OATP04181 439 aa13.48□□□□□ -0.25
COL6A4P1-204ENST00000508169 REPIN1Q9BWE0 567 aaKnown RBP13.48□□□□□ -0.25
COL6A4P1-204ENST00000508169 MDM2Q00987 491 aaPredicted RBP13.47□□□□□ -0.25
COL6A4P1-204ENST00000508169 FAM161AQ3B820 660 aa13.47□□□□□ -0.25
COL6A4P1-204ENST00000508169 TTC13Q8NBP0 860 aa13.47□□□□□ -0.25
COL6A4P1-204ENST00000508169 PHOX2BQ99453 314 aa13.47□□□□□ -0.25
COL6A4P1-204ENST00000508169 GPCPD1Q9NPB8 672 aa13.47□□□□□ -0.25
COL6A4P1-204ENST00000508169 MS4A1P11836 297 aa13.46□□□□□ -0.25
COL6A4P1-204ENST00000508169 PRSS12P56730 875 aa13.46□□□□□ -0.25
COL6A4P1-204ENST00000508169 METTL3Q86U44 580 aaKnown RBP13.46□□□□□ -0.25
COL6A4P1-204ENST00000508169 TMUB1Q9BVT8 246 aa13.46□□□□□ -0.25
COL6A4P1-204ENST00000508169 ADGRG1Q9Y653 693 aa13.46□□□□□ -0.25
COL6A4P1-204ENST00000508169 HOXB1P14653 301 aaPredicted RBP13.45□□□□□ -0.26
COL6A4P1-204ENST00000508169 CDCA7LQ96GN5 454 aa13.44□□□□□ -0.26
COL6A4P1-204ENST00000508169 BCL2L12Q9HB09 334 aa13.44□□□□□ -0.26
COL6A4P1-204ENST00000508169 PXYLP1Q8TE99 480 aa13.43□□□□□ -0.26
COL6A4P1-204ENST00000508169 PPP1R3GB7ZBB8 358 aa13.4□□□□□ -0.26
COL6A4P1-204ENST00000508169 COL9A1P20849 921 aa13.4□□□□□ -0.26
COL6A4P1-204ENST00000508169 PTPREP23469 700 aa13.4□□□□□ -0.26
COL6A4P1-204ENST00000508169 RBM46Q8TBY0 533 aaKnown RBP13.39□□□□□ -0.27
COL6A4P1-204ENST00000508169 NLRP7Q8WX94 980 aa13.39□□□□□ -0.27
COL6A4P1-204ENST00000508169 SSTR3P32745 418 aaPredicted RBP13.38□□□□□ -0.27
COL6A4P1-204ENST00000508169 OTUD5Q96G74 571 aa13.37□□□□□ -0.27
COL6A4P1-204ENST00000508169 GOPCQ9HD26 462 aa13.37□□□□□ -0.27
COL6A4P1-204ENST00000508169 FAM217BQ9NTX9 383 aaPredicted RBP13.36□□□□□ -0.27
COL6A4P1-204ENST00000508169 FAM198AQ9UFP1 575 aa13.35□□□□□ -0.27
COL6A4P1-204ENST00000508169 TSKSQ9UJT2 592 aa13.33□□□□□ -0.28
COL6A4P1-204ENST00000508169 BEGAINQ9BUH8 593 aa13.32□□□□□ -0.28
COL6A4P1-204ENST00000508169 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.31□□□□□ -0.28
COL6A4P1-204ENST00000508169 TRIM6-TRIM34B2RNG4 842 aa13.3□□□□□ -0.28
COL6A4P1-204ENST00000508169 NBPF26B4DH59 902 aa13.3□□□□□ -0.28
COL6A4P1-204ENST00000508169 SH3D19Q5HYK7 790 aa13.3□□□□□ -0.28
COL6A4P1-204ENST00000508169 KCNH8Q96L42 1107 aa13.3□□□□□ -0.28
COL6A4P1-204ENST00000508169 PCMTD1Q96MG8 357 aaPredicted RBP13.3□□□□□ -0.28
COL6A4P1-204ENST00000508169 KCNK17Q96T54 332 aa13.3□□□□□ -0.28
COL6A4P1-204ENST00000508169 EYA1Q99502 592 aa13.3□□□□□ -0.28
COL6A4P1-204ENST00000508169 RCCD1A6NED2 376 aa13.28□□□□□ -0.28
COL6A4P1-204ENST00000508169 NUDT18Q6ZVK8 323 aa13.28□□□□□ -0.28
COL6A4P1-204ENST00000508169 PACS2Q86VP3 889 aa13.28□□□□□ -0.28
COL6A4P1-204ENST00000508169 RSPH6AQ9H0K4 717 aa13.28□□□□□ -0.28
COL6A4P1-204ENST00000508169 LHX8Q68G74 356 aa13.26□□□□□ -0.29
COL6A4P1-204ENST00000508169 TATDN2Q93075 761 aa13.26□□□□□ -0.29
COL6A4P1-204ENST00000508169 PNMA3Q9UL41 463 aa13.26□□□□□ -0.29
COL6A4P1-204ENST00000508169 C3orf80F5H4A9 247 aa13.25□□□□□ -0.29
COL6A4P1-204ENST00000508169 ONECUT3O60422 494 aaPredicted RBP13.24□□□□□ -0.29
COL6A4P1-204ENST00000508169 DNAJB2P25686 324 aa13.24□□□□□ -0.29
COL6A4P1-204ENST00000508169 SKIV2LQ15477 1246 aaKnown RBP13.24□□□□□ -0.29
COL6A4P1-204ENST00000508169 PROX2Q3B8N5 592 aa13.24□□□□□ -0.29
COL6A4P1-204ENST00000508169 ERBB3P21860 1342 aa13.22□□□□□ -0.29
COL6A4P1-204ENST00000508169 VARS2Q5ST30 1063 aaKnown RBP13.2□□□□□ -0.3
COL6A4P1-204ENST00000508169 SULF1Q8IWU6 871 aa13.2□□□□□ -0.3
COL6A4P1-204ENST00000508169 ZBED2Q9BTP6 218 aa13.2□□□□□ -0.3
COL6A4P1-204ENST00000508169 PSEN2P49810 448 aa13.19□□□□□ -0.3
COL6A4P1-204ENST00000508169 MYSM1Q5VVJ2 828 aa13.19□□□□□ -0.3
COL6A4P1-204ENST00000508169 TMEM134Q9H6X4 195 aa13.19□□□□□ -0.3
COL6A4P1-204ENST00000508169 SMAPO00193 183 aa13.18□□□□□ -0.3
COL6A4P1-204ENST00000508169 DIXDC1Q155Q3 683 aa13.18□□□□□ -0.3
COL6A4P1-204ENST00000508169 ATP1B4Q9UN42 357 aaPredicted RBP13.18□□□□□ -0.3
COL6A4P1-204ENST00000508169 ARHGAP33O14559 1287 aa13.17□□□□□ -0.3
COL6A4P1-204ENST00000508169 CD46P15529 392 aa13.17□□□□□ -0.3
COL6A4P1-204ENST00000508169 FLIIQ13045 1269 aa13.17□□□□□ -0.3
COL6A4P1-204ENST00000508169 TBC1D2Q9BYX2 928 aa13.17□□□□□ -0.3
COL6A4P1-204ENST00000508169 POLR3EQ9NVU0 708 aa13.17□□□□□ -0.3
COL6A4P1-204ENST00000508169 KIAA1468Q9P260 1216 aa13.17□□□□□ -0.3
COL6A4P1-204ENST00000508169 DDX11L8A8MPP1 907 aa13.16□□□□□ -0.3
COL6A4P1-204ENST00000508169 ST18O60284 1047 aa13.15□□□□□ -0.3
COL6A4P1-204ENST00000508169 CLK2P49760 499 aaKnown RBP13.14□□□□□ -0.31
COL6A4P1-204ENST00000508169 EMP3P54852 163 aa13.14□□□□□ -0.31
COL6A4P1-204ENST00000508169 PROCA1Q8NCQ7 364 aaPredicted RBP13.14□□□□□ -0.31
COL6A4P1-204ENST00000508169 ZMYND15Q9H091 742 aa13.14□□□□□ -0.31
COL6A4P1-204ENST00000508169 POTEEQ6S8J3 1075 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms