RNA–Protein interactions for RNA: ENST00000508006.1

SNCB-204, Transcript of synuclein beta, humanhuman

TSL 2

Gene SNCB, Length 969 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-204ENST00000508006 FAM50AQ14320 339 aaKnown RBP34.14■■■■□ 3.06
SNCB-204ENST00000508006 CLTCQ00610 1675 aaKnown RBP34.14■■■■□ 3.06
SNCB-204ENST00000508006 TSPY4P0CV99 314 aa34.13■■■■□ 3.05
SNCB-204ENST00000508006 TSPY10P0CW01 314 aa34.13■■■■□ 3.05
SNCB-204ENST00000508006 SHANK2Q9UPX8 1470 aa34.13■■■■□ 3.05
SNCB-204ENST00000508006 DAPK1P53355 1430 aa34.12■■■■□ 3.05
SNCB-204ENST00000508006 LTBP4Q8N2S1 1624 aa34.12■■■■□ 3.05
SNCB-204ENST00000508006 PPP6R1Q9UPN7 881 aa34.1■■■■□ 3.05
SNCB-204ENST00000508006 ABCC5O15440 1437 aa34.1■■■■□ 3.05
SNCB-204ENST00000508006 PLXNC1O60486 1568 aa34.07■■■■□ 3.05
SNCB-204ENST00000508006 PKD2Q13563 968 aa34.07■■■■□ 3.04
SNCB-204ENST00000508006 IQSEC2Q5JU85 1478 aa34.05■■■■□ 3.04
SNCB-204ENST00000508006 PTPRKQ15262 1439 aa34.04■■■■□ 3.04
SNCB-204ENST00000508006 ADGBQ8N7X0 1667 aa34.03■■■■□ 3.04
SNCB-204ENST00000508006 ILDR2Q71H61 639 aa34.03■■■■□ 3.04
SNCB-204ENST00000508006 ZNF335Q9H4Z2 1342 aaPredicted RBP34.01■■■■□ 3.03
SNCB-204ENST00000508006 MYO3AQ8NEV4 1616 aa34■■■■□ 3.03
SNCB-204ENST00000508006 CEP170BQ9Y4F5 1589 aaPredicted RBP33.98■■■■□ 3.03
SNCB-204ENST00000508006 PLA2R1Q13018 1463 aa33.96■■■■□ 3.03
SNCB-204ENST00000508006 UBAP1LF5GYI3 381 aa33.96■■■■□ 3.03
SNCB-204ENST00000508006 ZNF142P52746 1687 aaPredicted RBP33.96■■■■□ 3.03
SNCB-204ENST00000508006 ADGRL2O95490 1459 aa33.95■■■■□ 3.03
SNCB-204ENST00000508006 DHX29Q7Z478 1369 aaKnown RBP33.95■■■■□ 3.02
SNCB-204ENST00000508006 KIF3BO15066 747 aa33.94■■■■□ 3.02
SNCB-204ENST00000508006 ANKRD30AQ9BXX3 1397 aa33.91■■■■□ 3.02
SNCB-204ENST00000508006 SOCS7O14512 581 aa33.91■■■■□ 3.02
SNCB-204ENST00000508006 SPATA31D1Q6ZQQ2 1576 aa33.89■■■■□ 3.02
SNCB-204ENST00000508006 ROCK1Q13464 1354 aa33.88■■■■□ 3.01
SNCB-204ENST00000508006 DUOX2Q9NRD8 1548 aa33.86■■■■□ 3.01
SNCB-204ENST00000508006 A2ML1A8K2U0 1454 aa33.86■■■■□ 3.01
SNCB-204ENST00000508006 WASHC2CQ9Y4E1 1318 aa33.85■■■■□ 3.01
SNCB-204ENST00000508006 FBXO31Q5XUX0 539 aaPredicted RBP33.85■■■■□ 3.01
SNCB-204ENST00000508006 CHIC2Q9UKJ5 165 aa33.83■■■■□ 3.01
SNCB-204ENST00000508006 KIF15Q9NS87 1388 aa33.82■■■■□ 3
SNCB-204ENST00000508006 ITGAEP38570 1179 aa33.81■■■■□ 3
SNCB-204ENST00000508006 TNRQ92752 1358 aa33.81■■■■□ 3
SNCB-204ENST00000508006 EIF2AK4Q9P2K8 1649 aaKnown RBP33.8■■■■□ 3
SNCB-204ENST00000508006 ERBINQ96RT1 1412 aa33.77■■■■□ 3
SNCB-204ENST00000508006 RRP7BPQ9NSQ0 103 aa33.76■■■□□ 2.99
SNCB-204ENST00000508006 SCAF1Q9H7N4 1312 aaKnown RBP33.75■■■□□ 2.99
SNCB-204ENST00000508006 KDM5DQ9BY66 1539 aa33.74■■■□□ 2.99
SNCB-204ENST00000508006 ANKLE2Q86XL3 938 aa33.74■■■□□ 2.99
SNCB-204ENST00000508006 THEMISQ8N1K5 641 aaPredicted RBP33.73■■■□□ 2.99
SNCB-204ENST00000508006 PZPP20742 1482 aa33.72■■■□□ 2.99
SNCB-204ENST00000508006 GCC2Q8IWJ2 1684 aa33.7■■■□□ 2.99
SNCB-204ENST00000508006 FAM135AQ9P2D6 1515 aa33.69■■■□□ 2.98
SNCB-204ENST00000508006 TOM1O60784 492 aa33.68■■■□□ 2.98
SNCB-204ENST00000508006 PIP4K2BP78356 416 aa33.68■■■□□ 2.98
SNCB-204ENST00000508006 POLR1AO95602 1720 aaPredicted RBP33.67■■■□□ 2.98
SNCB-204ENST00000508006 RNF17Q9BXT8 1623 aaKnown RBP33.66■■■□□ 2.98
SNCB-204ENST00000508006 ANKRD50Q9ULJ7 1429 aa33.66■■■□□ 2.98
SNCB-204ENST00000508006 HFM1A2PYH4 1435 aa33.65■■■□□ 2.98
SNCB-204ENST00000508006 CPS1P31327 1500 aa33.62■■■□□ 2.97
SNCB-204ENST00000508006 NLRP1Q9C000 1473 aa33.62■■■□□ 2.97
SNCB-204ENST00000508006 NAIPQ13075 1403 aa33.61■■■□□ 2.97
SNCB-204ENST00000508006 DEPDC5O75140 1603 aa33.61■■■□□ 2.97
SNCB-204ENST00000508006 UGGT1Q9NYU2 1555 aa33.6■■■□□ 2.97
SNCB-204ENST00000508006 NEURL4Q96JN8 1562 aa33.6■■■□□ 2.97
SNCB-204ENST00000508006 TRIM26Q12899 539 aaPredicted RBP33.58■■■□□ 2.97
SNCB-204ENST00000508006 HSPA1LP34931 641 aa33.57■■■□□ 2.96
SNCB-204ENST00000508006 NPHP4O75161 1426 aaPredicted RBP33.54■■■□□ 2.96
SNCB-204ENST00000508006 PRDM15P57071 1507 aaPredicted RBP33.54■■■□□ 2.96
SNCB-204ENST00000508006 MROH1Q8NDA8 1641 aa33.53■■■□□ 2.96
SNCB-204ENST00000508006 ZC3H13Q5T200 1668 aaKnown RBP33.52■■■□□ 2.96
SNCB-204ENST00000508006 UNC13BO14795 1591 aa33.51■■■□□ 2.95
SNCB-204ENST00000508006 ACIN1Q9UKV3 1341 aaKnown RBP33.49■■■□□ 2.95
SNCB-204ENST00000508006 MED14O60244 1454 aa33.48■■■□□ 2.95
SNCB-204ENST00000508006 ABCC3O15438 1527 aa33.45■■■□□ 2.95
SNCB-204ENST00000508006 VWDEQ8N2E2 1590 aa33.45■■■□□ 2.95
SNCB-204ENST00000508006 KANK1Q14678 1352 aa33.45■■■□□ 2.94
SNCB-204ENST00000508006 SETD5Q9C0A6 1442 aa33.45■■■□□ 2.94
SNCB-204ENST00000508006 CFAP65Q6ZU64 1925 aaKnown RBP33.44■■■□□ 2.94
SNCB-204ENST00000508006 IQGAP1P46940 1657 aa33.42■■■□□ 2.94
SNCB-204ENST00000508006 ERVK-7P63135 1459 aa33.39■■■□□ 2.94
SNCB-204ENST00000508006 LMTK2Q8IWU2 1503 aa33.38■■■□□ 2.93
SNCB-204ENST00000508006 CEP152O94986 1710 aa33.38■■■□□ 2.93
SNCB-204ENST00000508006 IQGAP3Q86VI3 1631 aa33.38■■■□□ 2.93
SNCB-204ENST00000508006 SENP3Q9H4L4 574 aaPredicted RBP33.36■■■□□ 2.93
SNCB-204ENST00000508006 HRCP23327 699 aa33.34■■■□□ 2.93
SNCB-204ENST00000508006 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.34■■■□□ 2.93
SNCB-204ENST00000508006 PHF23Q9BUL5 403 aaPredicted RBP33.33■■■□□ 2.93
SNCB-204ENST00000508006 MED1Q15648 1581 aaPredicted RBP33.33■■■□□ 2.93
SNCB-204ENST00000508006 TXNDC2Q86VQ3 553 aa33.32■■■□□ 2.92
SNCB-204ENST00000508006 TET3O43151 1660 aa33.3■■■□□ 2.92
SNCB-204ENST00000508006 NUP155O75694 1391 aa33.3■■■□□ 2.92
SNCB-204ENST00000508006 RAB3GAP2Q9H2M9 1393 aa33.3■■■□□ 2.92
SNCB-204ENST00000508006 EID1Q9Y6B2 187 aa33.29■■■□□ 2.92
SNCB-204ENST00000508006 LRRC7Q96NW7 1537 aa33.28■■■□□ 2.92
SNCB-204ENST00000508006 STAG3Q9UJ98 1225 aa33.28■■■□□ 2.92
SNCB-204ENST00000508006 ARHGAP31Q2M1Z3 1444 aa33.28■■■□□ 2.92
SNCB-204ENST00000508006 UBR1Q8IWV7 1749 aa33.27■■■□□ 2.92
SNCB-204ENST00000508006 SCAF11Q99590 1463 aaKnown RBP33.26■■■□□ 2.92
SNCB-204ENST00000508006 STRCP1A6NGW2 1772 aa33.26■■■□□ 2.91
SNCB-204ENST00000508006 EFCAB6Q5THR3 1501 aa33.25■■■□□ 2.91
SNCB-204ENST00000508006 LTKP29376 864 aa33.25■■■□□ 2.91
SNCB-204ENST00000508006 ALKQ9UM73 1620 aa33.21■■■□□ 2.91
SNCB-204ENST00000508006 RPRD2Q5VT52 1461 aaKnown RBP33.21■■■□□ 2.91
SNCB-204ENST00000508006 TRIM52Q96A61 297 aa33.2■■■□□ 2.91
SNCB-204ENST00000508006 SYNMO15061 1565 aa33.2■■■□□ 2.91
SNCB-204ENST00000508006 SLIT1O75093 1534 aa33.16■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms