RNA–Protein interactions for RNA: ENST00000507588.1

FGFR3-209, Transcript of fibroblast growth factor receptor 3, humanhuman

TSL 1 (best)

Gene FGFR3, Length 336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-209ENST00000507588 ZC3H13Q5T200 1668 aaKnown RBP29.43■■■□□ 2.3
FGFR3-209ENST00000507588 APLP2Q06481 763 aa29.42■■■□□ 2.3
FGFR3-209ENST00000507588 NCOA1Q15788 1441 aa29.42■■■□□ 2.3
FGFR3-209ENST00000507588 SHANK2Q9UPX8 1470 aa29.42■■■□□ 2.3
FGFR3-209ENST00000507588 DNMT1P26358 1616 aaKnown RBP29.4■■■□□ 2.3
FGFR3-209ENST00000507588 CAMSAP1Q5T5Y3 1602 aa29.4■■■□□ 2.3
FGFR3-209ENST00000507588 KIF3BO15066 747 aa29.39■■■□□ 2.3
FGFR3-209ENST00000507588 FBXO41Q8TF61 875 aa29.39■■■□□ 2.3
FGFR3-209ENST00000507588 PZPP20742 1482 aa29.38■■■□□ 2.29
FGFR3-209ENST00000507588 TCOF1Q13428 1488 aaKnown RBP29.38■■■□□ 2.29
FGFR3-209ENST00000507588 PTPRTO14522 1441 aa29.37■■■□□ 2.29
FGFR3-209ENST00000507588 DMRT2Q9Y5R5 561 aa29.37■■■□□ 2.29
FGFR3-209ENST00000507588 FGD6Q6ZV73 1430 aa29.37■■■□□ 2.29
FGFR3-209ENST00000507588 MROH1Q8NDA8 1641 aa29.36■■■□□ 2.29
FGFR3-209ENST00000507588 DUOX2Q9NRD8 1548 aa29.35■■■□□ 2.29
FGFR3-209ENST00000507588 PLA2R1Q13018 1463 aa29.35■■■□□ 2.29
FGFR3-209ENST00000507588 ABCC5O15440 1437 aa29.31■■■□□ 2.28
FGFR3-209ENST00000507588 ABCC3O15438 1527 aa29.3■■■□□ 2.28
FGFR3-209ENST00000507588 A2ML1A8K2U0 1454 aa29.3■■■□□ 2.28
FGFR3-209ENST00000507588 CEP152O94986 1710 aa29.3■■■□□ 2.28
FGFR3-209ENST00000507588 DAPK1P53355 1430 aa29.29■■■□□ 2.28
FGFR3-209ENST00000507588 PRDM15P57071 1507 aaPredicted RBP29.27■■■□□ 2.28
FGFR3-209ENST00000507588 POLR1AO95602 1720 aaPredicted RBP29.27■■■□□ 2.28
FGFR3-209ENST00000507588 WASHC2CQ9Y4E1 1318 aa29.26■■■□□ 2.27
FGFR3-209ENST00000507588 DEPDC5O75140 1603 aa29.26■■■□□ 2.27
FGFR3-209ENST00000507588 ERBINQ96RT1 1412 aa29.26■■■□□ 2.27
FGFR3-209ENST00000507588 CERKQ8TCT0 537 aa29.24■■■□□ 2.27
FGFR3-209ENST00000507588 TNRQ92752 1358 aa29.24■■■□□ 2.27
FGFR3-209ENST00000507588 KIF15Q9NS87 1388 aa29.24■■■□□ 2.27
FGFR3-209ENST00000507588 SPATA31D1Q6ZQQ2 1576 aa29.22■■■□□ 2.27
FGFR3-209ENST00000507588 LTBP4Q8N2S1 1624 aa29.21■■■□□ 2.27
FGFR3-209ENST00000507588 NLRP1Q9C000 1473 aa29.2■■■□□ 2.26
FGFR3-209ENST00000507588 CFAP65Q6ZU64 1925 aaKnown RBP29.18■■■□□ 2.26
FGFR3-209ENST00000507588 FBXO31Q5XUX0 539 aaPredicted RBP29.17■■■□□ 2.26
FGFR3-209ENST00000507588 PKD2Q13563 968 aa29.15■■■□□ 2.26
FGFR3-209ENST00000507588 ADGRL2O95490 1459 aa29.15■■■□□ 2.26
FGFR3-209ENST00000507588 ERVK-7P63135 1459 aa29.14■■■□□ 2.26
FGFR3-209ENST00000507588 NEURL4Q96JN8 1562 aa29.13■■■□□ 2.25
FGFR3-209ENST00000507588 UGGT1Q9NYU2 1555 aa29.12■■■□□ 2.25
FGFR3-209ENST00000507588 NCKAP5LQ9HCH0 1330 aa29.12■■■□□ 2.25
FGFR3-209ENST00000507588 IQSEC2Q5JU85 1478 aa29.11■■■□□ 2.25
FGFR3-209ENST00000507588 ANKRD30AQ9BXX3 1397 aa29.11■■■□□ 2.25
FGFR3-209ENST00000507588 ARHGAP31Q2M1Z3 1444 aa29.09■■■□□ 2.25
FGFR3-209ENST00000507588 VWDEQ8N2E2 1590 aa29.09■■■□□ 2.25
FGFR3-209ENST00000507588 RRP7BPQ9NSQ0 103 aa29.08■■■□□ 2.25
FGFR3-209ENST00000507588 UBR1Q8IWV7 1749 aa29.06■■■□□ 2.24
FGFR3-209ENST00000507588 LMTK2Q8IWU2 1503 aa29.05■■■□□ 2.24
FGFR3-209ENST00000507588 CHIC2Q9UKJ5 165 aa29■■■□□ 2.23
FGFR3-209ENST00000507588 MED14O60244 1454 aa28.99■■■□□ 2.23
FGFR3-209ENST00000507588 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.99■■■□□ 2.231e-13■■■■□ 22.7
FGFR3-209ENST00000507588 IQGAP1P46940 1657 aa28.99■■■□□ 2.23
FGFR3-209ENST00000507588 EFCAB6Q5THR3 1501 aa28.98■■■□□ 2.23
FGFR3-209ENST00000507588 KANK1Q14678 1352 aa28.98■■■□□ 2.23
FGFR3-209ENST00000507588 ZNF335Q9H4Z2 1342 aaPredicted RBP28.97■■■□□ 2.23
FGFR3-209ENST00000507588 FAM50AQ14320 339 aaKnown RBP28.97■■■□□ 2.23
FGFR3-209ENST00000507588 THEMISQ8N1K5 641 aaPredicted RBP28.97■■■□□ 2.23
FGFR3-209ENST00000507588 KDM5AP29375 1690 aaKnown RBP28.96■■■□□ 2.23
FGFR3-209ENST00000507588 PIK3C2BO00750 1634 aa28.93■■■□□ 2.22
FGFR3-209ENST00000507588 ANKRD50Q9ULJ7 1429 aa28.93■■■□□ 2.22
FGFR3-209ENST00000507588 UNC13BO14795 1591 aa28.92■■■□□ 2.22
FGFR3-209ENST00000507588 ANKLE2Q86XL3 938 aa28.91■■■□□ 2.22
FGFR3-209ENST00000507588 TET3O43151 1660 aa28.89■■■□□ 2.22
FGFR3-209ENST00000507588 GCC2Q8IWJ2 1684 aa28.89■■■□□ 2.22
FGFR3-209ENST00000507588 SLIT1O75093 1534 aa28.89■■■□□ 2.22
FGFR3-209ENST00000507588 CPS1P31327 1500 aa28.89■■■□□ 2.22
FGFR3-209ENST00000507588 SYNMO15061 1565 aa28.89■■■□□ 2.22
FGFR3-209ENST00000507588 NPHP4O75161 1426 aaPredicted RBP28.89■■■□□ 2.22
FGFR3-209ENST00000507588 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.89■■■□□ 2.221e-10■■□□□ 11.6
FGFR3-209ENST00000507588 ARHGAP23Q9P227 1491 aa28.88■■■□□ 2.21
FGFR3-209ENST00000507588 ROCK1Q13464 1354 aa28.86■■■□□ 2.21
FGFR3-209ENST00000507588 RPRD2Q5VT52 1461 aaKnown RBP28.85■■■□□ 2.21
FGFR3-209ENST00000507588 NOS1P29475 1434 aa28.84■■■□□ 2.21
FGFR3-209ENST00000507588 SCAF11Q99590 1463 aaKnown RBP28.83■■■□□ 2.21
FGFR3-209ENST00000507588 STRCP1A6NGW2 1772 aa28.82■■■□□ 2.2
FGFR3-209ENST00000507588 IQGAP3Q86VI3 1631 aa28.8■■■□□ 2.2
FGFR3-209ENST00000507588 ADGRB3O60242 1522 aa28.79■■■□□ 2.2
FGFR3-209ENST00000507588 E9PCH4 1651 aa28.76■■■□□ 2.19
FGFR3-209ENST00000507588 MYO5BQ9ULV0 1848 aa28.76■■■□□ 2.19
FGFR3-209ENST00000507588 TMEM2Q9UHN6 1383 aa28.72■■■□□ 2.19
FGFR3-209ENST00000507588 RRBP1Q9P2E9 1410 aaKnown RBP28.71■■■□□ 2.19
FGFR3-209ENST00000507588 IDI1Q13907 227 aa28.68■■■□□ 2.18
FGFR3-209ENST00000507588 LTKP29376 864 aa28.67■■■□□ 2.18
FGFR3-209ENST00000507588 PPARGC1BQ86YN6 1023 aaKnown RBP28.67■■■□□ 2.18
FGFR3-209ENST00000507588 UBAP1LF5GYI3 381 aa28.65■■■□□ 2.18
FGFR3-209ENST00000507588 SLC52A1Q9NWF4 448 aa28.65■■■□□ 2.18
FGFR3-209ENST00000507588 TMEM131LA2VDJ0 1609 aa28.65■■■□□ 2.18
FGFR3-209ENST00000507588 TXNDC2Q86VQ3 553 aa28.64■■■□□ 2.18
FGFR3-209ENST00000507588 EID1Q9Y6B2 187 aa28.64■■■□□ 2.18
FGFR3-209ENST00000507588 XIRP1Q702N8 1843 aaKnown RBP28.64■■■□□ 2.17
FGFR3-209ENST00000507588 LRRC7Q96NW7 1537 aa28.64■■■□□ 2.17
FGFR3-209ENST00000507588 STAG3Q9UJ98 1225 aa28.63■■■□□ 2.17
FGFR3-209ENST00000507588 ALKQ9UM73 1620 aa28.61■■■□□ 2.17
FGFR3-209ENST00000507588 SPHKAPQ2M3C7 1700 aa28.59■■■□□ 2.17
FGFR3-209ENST00000507588 ITGAEP38570 1179 aa28.58■■■□□ 2.17
FGFR3-209ENST00000507588 ZFYVE9O95405 1425 aa28.57■■■□□ 2.16
FGFR3-209ENST00000507588 NUP155O75694 1391 aa28.55■■■□□ 2.16
FGFR3-209ENST00000507588 NWD1Q149M9 1564 aa28.54■■■□□ 2.16
FGFR3-209ENST00000507588 TOM1O60784 492 aa28.52■■■□□ 2.16
FGFR3-209ENST00000507588 NAIPQ13075 1403 aa28.5■■■□□ 2.15
FGFR3-209ENST00000507588 RIMS2Q9UQ26 1411 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms