RNA–Protein interactions for RNA: ENST00000507471.1

TSPAN17-206, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 707 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-206ENST00000507471 KDM5DQ9BY66 1539 aa22.26■■□□□ 1.15
TSPAN17-206ENST00000507471 NCOA2Q15596 1464 aa22.26■■□□□ 1.15
TSPAN17-206ENST00000507471 KIF3BO15066 747 aa22.25■■□□□ 1.15
TSPAN17-206ENST00000507471 POLR1AO95602 1720 aaPredicted RBP22.24■■□□□ 1.15
TSPAN17-206ENST00000507471 UBAP1LF5GYI3 381 aa22.24■■□□□ 1.15
TSPAN17-206ENST00000507471 FAM135AQ9P2D6 1515 aa22.24■■□□□ 1.15
TSPAN17-206ENST00000507471 PZPP20742 1482 aa22.23■■□□□ 1.15
TSPAN17-206ENST00000507471 TNRQ92752 1358 aa22.23■■□□□ 1.15
TSPAN17-206ENST00000507471 NEURL4Q96JN8 1562 aa22.22■■□□□ 1.15
TSPAN17-206ENST00000507471 FBXO31Q5XUX0 539 aaPredicted RBP22.22■■□□□ 1.15
TSPAN17-206ENST00000507471 RSPH4AQ5TD94 716 aa22.19■■□□□ 1.14
TSPAN17-206ENST00000507471 ARHGEF5Q12774 1597 aa22.19■■□□□ 1.14
TSPAN17-206ENST00000507471 WASHC2CQ9Y4E1 1318 aa22.17■■□□□ 1.14
TSPAN17-206ENST00000507471 CPS1P31327 1500 aa22.15■■□□□ 1.14
TSPAN17-206ENST00000507471 MIA2Q96PC5 1412 aa22.14■■□□□ 1.13
TSPAN17-206ENST00000507471 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.13■■□□□ 1.13
TSPAN17-206ENST00000507471 NLRP1Q9C000 1473 aa22.13■■□□□ 1.13
TSPAN17-206ENST00000507471 SHANK2Q9UPX8 1470 aa22.13■■□□□ 1.13
TSPAN17-206ENST00000507471 UGGT1Q9NYU2 1555 aa22.12■■□□□ 1.13
TSPAN17-206ENST00000507471 RNF17Q9BXT8 1623 aaKnown RBP22.11■■□□□ 1.13
TSPAN17-206ENST00000507471 TSPY4P0CV99 314 aa22.11■■□□□ 1.13
TSPAN17-206ENST00000507471 TSPY10P0CW01 314 aa22.11■■□□□ 1.13
TSPAN17-206ENST00000507471 LRRC9Q6ZRR7 1453 aa22.1■■□□□ 1.13
TSPAN17-206ENST00000507471 DEPDC5O75140 1603 aa22.1■■□□□ 1.13
TSPAN17-206ENST00000507471 MAST1Q9Y2H9 1570 aa22.1■■□□□ 1.13
TSPAN17-206ENST00000507471 VWDEQ8N2E2 1590 aa22.09■■□□□ 1.13
TSPAN17-206ENST00000507471 ANKLE2Q86XL3 938 aa22.09■■□□□ 1.13
TSPAN17-206ENST00000507471 THEMISQ8N1K5 641 aaPredicted RBP22.09■■□□□ 1.13
TSPAN17-206ENST00000507471 ZC3H13Q5T200 1668 aaKnown RBP22.09■■□□□ 1.13
TSPAN17-206ENST00000507471 MED14O60244 1454 aa22.09■■□□□ 1.13
TSPAN17-206ENST00000507471 VPS8Q8N3P4 1428 aa22.07■■□□□ 1.12
TSPAN17-206ENST00000507471 ABCC3O15438 1527 aa22.07■■□□□ 1.12
TSPAN17-206ENST00000507471 NPHP4O75161 1426 aaPredicted RBP22.06■■□□□ 1.12
TSPAN17-206ENST00000507471 EIF2AK4Q9P2K8 1649 aaKnown RBP22.06■■□□□ 1.12
TSPAN17-206ENST00000507471 SCAF1Q9H7N4 1312 aaKnown RBP22.06■■□□□ 1.12
TSPAN17-206ENST00000507471 TOM1O60784 492 aa22.05■■□□□ 1.12
TSPAN17-206ENST00000507471 PIP4K2BP78356 416 aa22.05■■□□□ 1.12
TSPAN17-206ENST00000507471 IQGAP1P46940 1657 aa22.04■■□□□ 1.12
TSPAN17-206ENST00000507471 MROH1Q8NDA8 1641 aa22.04■■□□□ 1.12
TSPAN17-206ENST00000507471 HSPA1LP34931 641 aa22.03■■□□□ 1.12
TSPAN17-206ENST00000507471 ERVK-7P63135 1459 aa22.02■■□□□ 1.12
TSPAN17-206ENST00000507471 MED1Q15648 1581 aaPredicted RBP22.01■■□□□ 1.11
TSPAN17-206ENST00000507471 ALKQ9UM73 1620 aa22.01■■□□□ 1.11
TSPAN17-206ENST00000507471 CEP152O94986 1710 aa22■■□□□ 1.11
TSPAN17-206ENST00000507471 MYOM3Q5VTT5 1437 aa21.99■■□□□ 1.11
TSPAN17-206ENST00000507471 KANK4Q5T7N3 995 aaPredicted RBP21.99■■□□□ 1.11
TSPAN17-206ENST00000507471 MAP3K1Q13233 1512 aa21.99■■□□□ 1.11
TSPAN17-206ENST00000507471 STRCP1A6NGW2 1772 aa21.99■■□□□ 1.11
TSPAN17-206ENST00000507471 UBR1Q8IWV7 1749 aa21.97■■□□□ 1.11
TSPAN17-206ENST00000507471 DUOX2Q9NRD8 1548 aa21.96■■□□□ 1.11
TSPAN17-206ENST00000507471 SYNMO15061 1565 aa21.95■■□□□ 1.1
TSPAN17-206ENST00000507471 LOC105371045A0A1W2PR82 267 aa21.94■■□□□ 1.1
TSPAN17-206ENST00000507471 LRRC7Q96NW7 1537 aa21.94■■□□□ 1.1
TSPAN17-206ENST00000507471 CROCC2H7BZ55 1655 aa21.92■■□□□ 1.1
TSPAN17-206ENST00000507471 PRDM15P57071 1507 aaPredicted RBP21.92■■□□□ 1.1
TSPAN17-206ENST00000507471 CFAP65Q6ZU64 1925 aaKnown RBP21.9■■□□□ 1.1
TSPAN17-206ENST00000507471 SCAF11Q99590 1463 aaKnown RBP21.9■■□□□ 1.1
TSPAN17-206ENST00000507471 ARHGAP31Q2M1Z3 1444 aa21.89■■□□□ 1.09
TSPAN17-206ENST00000507471 KIF15Q9NS87 1388 aa21.88■■□□□ 1.09
TSPAN17-206ENST00000507471 SLIT1O75093 1534 aa21.88■■□□□ 1.09
TSPAN17-206ENST00000507471 ARHGAP23Q9P227 1491 aa21.88■■□□□ 1.09
TSPAN17-206ENST00000507471 ERBINQ96RT1 1412 aa21.88■■□□□ 1.09
TSPAN17-206ENST00000507471 PTPN23Q9H3S7 1636 aa21.86■■□□□ 1.09
TSPAN17-206ENST00000507471 ABCC5O15440 1437 aa21.86■■□□□ 1.09
TSPAN17-206ENST00000507471 LTKP29376 864 aa21.84■■□□□ 1.09
TSPAN17-206ENST00000507471 PIK3C2BO00750 1634 aa21.84■■□□□ 1.09
TSPAN17-206ENST00000507471 RRP7BPQ9NSQ0 103 aa21.83■■□□□ 1.09
TSPAN17-206ENST00000507471 TXNDC2Q86VQ3 553 aa21.82■■□□□ 1.08
TSPAN17-206ENST00000507471 DAPK1P53355 1430 aa21.81■■□□□ 1.08
TSPAN17-206ENST00000507471 XIRP1Q702N8 1843 aaKnown RBP21.81■■□□□ 1.08
TSPAN17-206ENST00000507471 SENP3Q9H4L4 574 aaPredicted RBP21.81■■□□□ 1.08
TSPAN17-206ENST00000507471 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.79■■□□□ 1.08
TSPAN17-206ENST00000507471 PHF23Q9BUL5 403 aaPredicted RBP21.79■■□□□ 1.08
TSPAN17-206ENST00000507471 KDM5AP29375 1690 aaKnown RBP21.77■■□□□ 1.08
TSPAN17-206ENST00000507471 EID1Q9Y6B2 187 aa21.77■■□□□ 1.08
TSPAN17-206ENST00000507471 KANK1Q14678 1352 aa21.76■■□□□ 1.07
TSPAN17-206ENST00000507471 TMEM2Q9UHN6 1383 aa21.76■■□□□ 1.07
TSPAN17-206ENST00000507471 LMTK2Q8IWU2 1503 aa21.76■■□□□ 1.07
TSPAN17-206ENST00000507471 FGD6Q6ZV73 1430 aa21.76■■□□□ 1.07
TSPAN17-206ENST00000507471 EFCAB6Q5THR3 1501 aa21.75■■□□□ 1.07
TSPAN17-206ENST00000507471 APLP2Q06481 763 aa21.72■■□□□ 1.07
TSPAN17-206ENST00000507471 STAG3Q9UJ98 1225 aa21.72■■□□□ 1.07
TSPAN17-206ENST00000507471 ANKRD30AQ9BXX3 1397 aa21.72■■□□□ 1.07
TSPAN17-206ENST00000507471 IDI1Q13907 227 aa21.71■■□□□ 1.07
TSPAN17-206ENST00000507471 CHIC2Q9UKJ5 165 aa21.71■■□□□ 1.07
TSPAN17-206ENST00000507471 TET3O43151 1660 aa21.69■■□□□ 1.06
TSPAN17-206ENST00000507471 NOS1P29475 1434 aa21.68■■□□□ 1.06
TSPAN17-206ENST00000507471 ADGRB3O60242 1522 aa21.67■■□□□ 1.06
TSPAN17-206ENST00000507471 FAM135BQ49AJ0 1406 aa21.66■■□□□ 1.06
TSPAN17-206ENST00000507471 TMEM94Q12767 1356 aa21.66■■□□□ 1.06
TSPAN17-206ENST00000507471 ADGRL2O95490 1459 aa21.65■■□□□ 1.06
TSPAN17-206ENST00000507471 KCNA6P17658 529 aa21.64■■□□□ 1.05
TSPAN17-206ENST00000507471 SLC26A8Q96RN1 970 aa21.64■■□□□ 1.05
TSPAN17-206ENST00000507471 NWD1Q149M9 1564 aa21.63■■□□□ 1.05
TSPAN17-206ENST00000507471 RGS17Q9UGC6 210 aaPredicted RBP21.63■■□□□ 1.05
TSPAN17-206ENST00000507471 ROBO1Q9Y6N7 1651 aa21.63■■□□□ 1.05
TSPAN17-206ENST00000507471 NKTRP30414 1462 aaKnown RBP21.6■■□□□ 1.05
TSPAN17-206ENST00000507471 PROSER2Q86WR7 435 aaPredicted RBP21.6■■□□□ 1.05
TSPAN17-206ENST00000507471 RBM33Q96EV2 1170 aaKnown RBP21.6■■□□□ 1.05
TSPAN17-206ENST00000507471 RPRD2Q5VT52 1461 aaKnown RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms