RNA–Protein interactions for RNA: ENST00000507469.5

SMG7-212, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-212ENST00000507469 PPM1GO15355 546 aaPredicted RBP15.28■□□□□ 0.04
SMG7-212ENST00000507469 NBPF1Q3BBV0 1214 aa15.28■□□□□ 0.04
SMG7-212ENST00000507469 DEKP35659 375 aaKnown RBP15.28■□□□□ 0.04
SMG7-212ENST00000507469 SAMD9Q5K651 1589 aa15.27■□□□□ 0.04
SMG7-212ENST00000507469 FRAT1Q92837 279 aaPredicted RBP15.27■□□□□ 0.04
SMG7-212ENST00000507469 PLIN1O60240 522 aa15.27■□□□□ 0.03
SMG7-212ENST00000507469 GOLGA2Q08379 1002 aa15.27■□□□□ 0.03
SMG7-212ENST00000507469 EIF3AQ14152 1382 aaKnown RBP15.27■□□□□ 0.03
SMG7-212ENST00000507469 ABCA5Q8WWZ7 1642 aa15.26■□□□□ 0.03
SMG7-212ENST00000507469 MORC1Q86VD1 984 aa15.26■□□□□ 0.03
SMG7-212ENST00000507469 SMG6Q86US8 1419 aaKnown RBP15.26■□□□□ 0.03
SMG7-212ENST00000507469 NUP153P49790 1475 aaKnown RBP15.26■□□□□ 0.03
SMG7-212ENST00000507469 GGT6Q6P531 493 aa15.25■□□□□ 0.03
SMG7-212ENST00000507469 ARHGEF11O15085 1522 aa15.25■□□□□ 0.03
SMG7-212ENST00000507469 MAGI1Q96QZ7 1491 aaPredicted RBP15.24■□□□□ 0.03
SMG7-212ENST00000507469 CCDC146Q8IYE0 955 aa15.24■□□□□ 0.03
SMG7-212ENST00000507469 WDR62O43379 1518 aa15.24■□□□□ 0.03
SMG7-212ENST00000507469 ARHGAP5Q13017 1502 aa15.24■□□□□ 0.03
SMG7-212ENST00000507469 GPATCH8Q9UKJ3 1502 aaKnown RBP15.23■□□□□ 0.03
SMG7-212ENST00000507469 ADAMTS12P58397 1594 aa15.23■□□□□ 0.03
SMG7-212ENST00000507469 RAPGEF6Q8TEU7 1601 aa15.21■□□□□ 0.03
SMG7-212ENST00000507469 ESF1Q9H501 851 aaKnown RBP15.21■□□□□ 0.03
SMG7-212ENST00000507469 MAGI3Q5TCQ9 1506 aa15.21■□□□□ 0.03
SMG7-212ENST00000507469 PDE4AP27815 886 aa15.2■□□□□ 0.02
SMG7-212ENST00000507469 CRBNQ96SW2 442 aa15.2■□□□□ 0.02
SMG7-212ENST00000507469 CDCA7LQ96GN5 454 aa15.2■□□□□ 0.02
SMG7-212ENST00000507469 KIF21AQ7Z4S6 1674 aa15.19■□□□□ 0.02
SMG7-212ENST00000507469 BECN1Q14457 450 aa15.19■□□□□ 0.02
SMG7-212ENST00000507469 FTSJ3Q8IY81 847 aaKnown RBP15.19■□□□□ 0.02
SMG7-212ENST00000507469 WASHC2CQ9Y4E1 1318 aa15.18■□□□□ 0.02
SMG7-212ENST00000507469 SAFB2Q14151 953 aaKnown RBP eCLIP15.17■□□□□ 0.02
SMG7-212ENST00000507469 KIAA0556O60303 1618 aa15.17■□□□□ 0.02
SMG7-212ENST00000507469 U2SURPO15042 1029 aaKnown RBP15.17■□□□□ 0.02
SMG7-212ENST00000507469 POGKQ9P215 609 aa15.17■□□□□ 0.02
SMG7-212ENST00000507469 KIF14Q15058 1648 aa15.17■□□□□ 0.02
SMG7-212ENST00000507469 MAPK8IP3Q9UPT6 1336 aa15.17■□□□□ 0.02
SMG7-212ENST00000507469 CCDC141Q6ZP82 1450 aa15.16■□□□□ 0.02
SMG7-212ENST00000507469 AFAP1Q8N556 730 aa15.16■□□□□ 0.02
SMG7-212ENST00000507469 ADAMTS8Q9UP79 889 aa15.16■□□□□ 0.02
SMG7-212ENST00000507469 STAC3Q96MF2 364 aa15.15■□□□□ 0.02
SMG7-212ENST00000507469 TRAK1Q9UPV9 953 aa15.15■□□□□ 0.02
SMG7-212ENST00000507469 APAF1O14727 1248 aa15.14■□□□□ 0.01
SMG7-212ENST00000507469 MSH5O43196 834 aa15.14■□□□□ 0.01
SMG7-212ENST00000507469 SRPK2P78362 688 aaKnown RBP15.14■□□□□ 0.01
SMG7-212ENST00000507469 MS4A1P11836 297 aa15.13■□□□□ 0.01
SMG7-212ENST00000507469 HSP90AA1P07900 732 aaKnown RBP15.13■□□□□ 0.01
SMG7-212ENST00000507469 DISP1Q96F81 1524 aa15.13■□□□□ 0.01
SMG7-212ENST00000507469 PLEKHH2Q8IVE3 1493 aa15.13■□□□□ 0.01
SMG7-212ENST00000507469 CENPQQ7L2Z9 268 aaPredicted RBP15.12■□□□□ 0.01
SMG7-212ENST00000507469 STK26Q9P289 416 aa15.12■□□□□ 0.01
SMG7-212ENST00000507469 DNMT1P26358 1616 aaKnown RBP15.12■□□□□ 0.01
SMG7-212ENST00000507469 U2AF1L5P0DN76 240 aaPredicted RBP15.12■□□□□ 0.01
SMG7-212ENST00000507469 U2AF1Q01081 240 aaKnown RBP eCLIP15.12■□□□□ 0.012e-8■■□□□ 12.3
SMG7-212ENST00000507469 PBRM1Q86U86 1689 aa15.12■□□□□ 0.01
SMG7-212ENST00000507469 ERBINQ96RT1 1412 aa15.11■□□□□ 0.01
SMG7-212ENST00000507469 PPP2R1AP30153 589 aa15.1■□□□□ 0.01
SMG7-212ENST00000507469 PZPP20742 1482 aa15.1■□□□□ 0.01
SMG7-212ENST00000507469 TARBP1Q13395 1621 aaKnown RBP15.1■□□□□ 0.01
SMG7-212ENST00000507469 CENPJQ9HC77 1338 aaPredicted RBP15.1■□□□□ 0.01
SMG7-212ENST00000507469 ATP10BO94823 1461 aa15.1■□□□□ 0.01
SMG7-212ENST00000507469 ITSN2Q9NZM3 1697 aa15.1■□□□□ 0.01
SMG7-212ENST00000507469 GCC2Q8IWJ2 1684 aa15.1■□□□□ 0.01
SMG7-212ENST00000507469 TEX14Q8IWB6 1497 aa15.1■□□□□ 0.01
SMG7-212ENST00000507469 NUTM2DQ5VT03 806 aaPredicted RBP15.1■□□□□ 0.01
SMG7-212ENST00000507469 E9PSI1 815 aa15.09■□□□□ 0.01
SMG7-212ENST00000507469 RALGAPBQ86X10 1494 aa15.08■□□□□ 0
SMG7-212ENST00000507469 RRP7AQ9Y3A4 280 aaKnown RBP15.08■□□□□ 0
SMG7-212ENST00000507469 KDM6BO15054 1643 aa15.07■□□□□ 0
SMG7-212ENST00000507469 CFAP70Q5T0N1 1121 aa15.07■□□□□ 0
SMG7-212ENST00000507469 ARXQ96QS3 562 aa15.07■□□□□ 0
SMG7-212ENST00000507469 MYH16Q9H6N6 1097 aa15.06■□□□□ 0
SMG7-212ENST00000507469 DHX29Q7Z478 1369 aaKnown RBP15.05■□□□□ 0
SMG7-212ENST00000507469 PAK3O75914 559 aaPredicted RBP15.05■□□□□ -0
SMG7-212ENST00000507469 FAM161AQ3B820 660 aa15.05■□□□□ -0
SMG7-212ENST00000507469 PNNQ9H307 717 aaKnown RBP15.05■□□□□ -0
SMG7-212ENST00000507469 CLUAP1Q96AJ1 413 aa15.04■□□□□ -0
SMG7-212ENST00000507469 NGEFQ8N5V2 710 aa15.03■□□□□ -0
SMG7-212ENST00000507469 PMFBP1Q8TBY8 1022 aa15.02■□□□□ -0
SMG7-212ENST00000507469 RWDD1Q9H446 243 aaPredicted RBP15.02■□□□□ -0
SMG7-212ENST00000507469 EIF4G3O43432 1585 aaKnown RBP15.02□□□□□ -0.01
SMG7-212ENST00000507469 CGNL1Q0VF96 1302 aa15.01□□□□□ -0.01
SMG7-212ENST00000507469 SPATA31E1Q6ZUB1 1445 aa15.01□□□□□ -0.01
SMG7-212ENST00000507469 SLC4A3P48751 1232 aa15.01□□□□□ -0.01
SMG7-212ENST00000507469 COG6Q9Y2V7 657 aa15.01□□□□□ -0.01
SMG7-212ENST00000507469 ADGRL2O95490 1459 aa15.01□□□□□ -0.01
SMG7-212ENST00000507469 HDGFL2Q7Z4V5 671 aaPredicted RBP15.01□□□□□ -0.01
SMG7-212ENST00000507469 PLPPR3Q6T4P5 718 aa15.01□□□□□ -0.01
SMG7-212ENST00000507469 RTN4Q9NQC3 1192 aaKnown RBP15□□□□□ -0.01
SMG7-212ENST00000507469 BCL2L13Q9BXK5 485 aa15□□□□□ -0.01
SMG7-212ENST00000507469 USP35Q9P2H5 1018 aa15□□□□□ -0.01
SMG7-212ENST00000507469 DISP3Q9P2K9 1392 aa15□□□□□ -0.01
SMG7-212ENST00000507469 VGFO15240 615 aaPredicted RBP14.99□□□□□ -0.01
SMG7-212ENST00000507469 SHANK2Q9UPX8 1470 aa14.99□□□□□ -0.01
SMG7-212ENST00000507469 EVC2Q86UK5 1308 aa14.99□□□□□ -0.01
SMG7-212ENST00000507469 TERF2IPQ9NYB0 399 aa14.99□□□□□ -0.01
SMG7-212ENST00000507469 BACH2Q9BYV9 841 aa14.98□□□□□ -0.01
SMG7-212ENST00000507469 SMC4Q9NTJ3 1288 aa14.98□□□□□ -0.01
SMG7-212ENST00000507469 SCAPERQ9BY12 1400 aa14.98□□□□□ -0.01
SMG7-212ENST00000507469 ITPRIPQ8IWB1 547 aa14.97□□□□□ -0.01
SMG7-212ENST00000507469 PRAG1Q86YV5 1406 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms